RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 LMBRD2Q68DH5 695 aaPredicted RBP9.34□□□□□ -0.92
BRCA1-205ENST00000461221 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 OTOAQ7RTW8 1153 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 ELOA2Q8IYF1 753 aaPredicted RBP9.34□□□□□ -0.92
BRCA1-205ENST00000461221 OR8H2Q8N162 312 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 WDR36Q8NI36 951 aaKnown RBP9.34□□□□□ -0.92
BRCA1-205ENST00000461221 CASP10Q92851 521 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 VPS33AQ96AX1 596 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 ZNF668Q96K58 619 aaPredicted RBP9.34□□□□□ -0.92
BRCA1-205ENST00000461221 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 RNPEPQ9H4A4 650 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 TDRD3Q9H7E2 651 aaKnown RBP9.34□□□□□ -0.92
BRCA1-205ENST00000461221 ERAP1Q9NZ08 941 aa9.34□□□□□ -0.92
BRCA1-205ENST00000461221 SASH1O94885 1247 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 TDP2O95551 362 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 TXNP10599 105 aaKnown RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 ITGA4P13612 1032 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SERPINB8P50452 374 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 PEX5P50542 639 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 ITGA8P53708 1063 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 CAMK2GQ13555 558 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 CHSY1Q86X52 802 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 COL23A1Q86Y22 540 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 ISCUQ9H1K1 167 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 RHBDL2Q9NX52 303 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 DYRK1BQ9Y463 629 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 P4HA2O15460 535 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 VPS26AO75436 327 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 HPGDP15428 266 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 ITGAXP20702 1163 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 NMT1P30419 496 aaKnown RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 GSTA3Q16772 222 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 MFSD4BQ5TF39 518 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 C12orf60Q5U649 245 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 ZCCHC8Q6NZY4 707 aaKnown RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SH2D3CQ8N5H7 860 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SLC30A5Q8TAD4 765 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 TFB1MQ8WVM0 346 aaKnown RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 COQ7Q99807 217 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 PIGUQ9H490 435 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SLC40A1Q9NP59 571 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 RAD54BQ9Y620 910 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SMIM31A0A1B0GVY4 71 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SARSP49591 514 aaKnown RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 KLHL24Q6TFL4 600 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 BNC2Q6ZN30 1099 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 KRT74Q7RTS7 529 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 MS4A14Q96JA4 679 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 WDR41Q9HAD4 459 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 DCP1AQ9NPI6 582 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SPATA2Q9UM82 520 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 USP27XA6NNY8 438 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SLCO1B7G3V0H7 640 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 TBX3O15119 743 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 YWHAQP27348 245 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 GRK3P35626 688 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 RXRGP48443 463 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 SPP2Q13103 211 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 INAQ16352 499 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 CLEC16AQ2KHT3 1053 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 FUT11Q495W5 492 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 TRIQKQ629K1 86 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 PLA2G4FQ68DD2 849 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 DENND1BQ6P3S1 775 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 RASGRP2Q7LDG7 609 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 CDK20Q8IZL9 346 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 UBE2OQ9C0C9 1292 aaKnown RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 PCDHB2Q9Y5E7 798 aa9.33□□□□□ -0.92
BRCA1-205ENST00000461221 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-205ENST00000461221 ATP7AQ04656 1500 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 LOC100653049A0A140TA62 436 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ZBTB39O15060 712 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 KRT34O76011 436 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 KLHL18O94889 574 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 CLTBP09497 229 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 GYS1P13807 737 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 PIK3R1P27986 724 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 PNPLA4P41247 253 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 CACNB3P54284 484 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 RAD23AP54725 363 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ITIH4Q14624 930 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 OMA1Q96E52 524 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 SLITRK1Q96PX8 696 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 C7orf25Q9BPX7 421 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 PHACTR1Q9C0D0 580 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 CCSER1Q9C0I3 900 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 HDHD2Q9H0R4 259 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ALDH8A1Q9H2A2 487 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 UBAP1Q9NZ09 502 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 FAM153AQ9UHL3 310 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 SNPHO15079 494 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 C21orf2O43822 256 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 GH1P01241 217 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 GTF2E2P29084 291 aaKnown RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 ALDH1A3P47895 512 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 SNRNP35Q16560 246 aaKnown RBP9.32□□□□□ -0.92
BRCA1-205ENST00000461221 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
BRCA1-205ENST00000461221 TAF2Q6P1X5 1199 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms