RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GPD2P43304 727 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 CDR1P51861 262 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 SNX16P57768 344 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 ADAM17P78536 824 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 ADCY2Q08462 1091 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 BYSLQ13895 437 aaKnown RBP24.36■■□□□ 1.49
VPS16-201ENST00000380443 ZBTB6Q15916 424 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 C6orf118Q5T5N4 469 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 TLK2Q86UE8 772 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 NME8Q8N427 588 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 OR2W6PQ8NHA6 318 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 TWNKQ96RR1 684 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 ROPN1BQ9BZX4 212 aaPredicted RBP24.36■■□□□ 1.49
VPS16-201ENST00000380443 DNAI2Q9GZS0 605 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 AP5M1Q9H0R1 490 aa24.36■■□□□ 1.49
VPS16-201ENST00000380443 ROPN1Q9HAT0 212 aaPredicted RBP24.36■■□□□ 1.49
VPS16-201ENST00000380443 R3HDM2Q9Y2K5 976 aaKnown RBP24.36■■□□□ 1.49
VPS16-201ENST00000380443 SETSIPP0DME0 302 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 RFC1P35251 1148 aaPredicted RBP24.35■■□□□ 1.49
VPS16-201ENST00000380443 PSEN2P49810 448 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 TAF1CQ15572 869 aaPredicted RBP24.35■■□□□ 1.49
VPS16-201ENST00000380443 ZFYVE27Q5T4F4 411 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 ATG4AQ8WYN0 398 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 STMN4Q9H169 189 aaPredicted RBP24.35■■□□□ 1.49
VPS16-201ENST00000380443 CYTH4Q9UIA0 394 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 GJC1P36383 396 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 RGS2P41220 211 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 NDST1P52848 882 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 PDCLQ13371 301 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 DAB2IPQ5VWQ8 1189 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 MFSD7Q6UXD7 560 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 TTC13Q8NBP0 860 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 SOCS4Q8WXH5 440 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 CPXM1Q96SM3 734 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 FAM49AQ9H0Q0 323 aaPredicted RBP24.35■■□□□ 1.49
VPS16-201ENST00000380443 CENPHQ9H3R5 247 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 ZFYVE28Q9HCC9 887 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 CNTN3Q9P232 1028 aa24.35■■□□□ 1.49
VPS16-201ENST00000380443 hCG_1818297A0A087WSY0 165 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 GOLGA8SH3BPF8 625 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 M0QYV0 167 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 RIPK2O43353 540 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 XPOTO43592 962 aaKnown RBP24.34■■□□□ 1.49
VPS16-201ENST00000380443 LIASO43766 372 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 GNAT1P11488 350 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 ADCY8P40145 1251 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 ALKAL1Q6UXT8 129 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 UNC93AQ86WB7 457 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 CNOT10Q9H9A5 744 aaKnown RBP24.34■■□□□ 1.49
VPS16-201ENST00000380443 ASNSD1Q9NWL6 643 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 ANAPC5Q9UJX4 755 aa24.34■■□□□ 1.49
VPS16-201ENST00000380443 MDH1P40925 334 aaKnown RBP24.33■■□□□ 1.49
VPS16-201ENST00000380443 CDKN2BP42772 138 aa24.33■■□□□ 1.49
VPS16-201ENST00000380443 SLC29A2Q14542 456 aa24.33■■□□□ 1.49
VPS16-201ENST00000380443 RELL1Q8IUW5 271 aa24.33■■□□□ 1.49
VPS16-201ENST00000380443 TLCD1Q96CP7 247 aa24.33■■□□□ 1.49
VPS16-201ENST00000380443 SNTG2Q9NY99 539 aa24.33■■□□□ 1.49
VPS16-201ENST00000380443 UBQLN1Q9UMX0 589 aaKnown RBP24.33■■□□□ 1.49
VPS16-201ENST00000380443 GRIN2DO15399 1336 aa24.33■■□□□ 1.49
VPS16-201ENST00000380443 CD4P01730 458 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 ERBB2P04626 1255 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 HSPA8P11142 646 aaKnown RBP24.33■■□□□ 1.48
VPS16-201ENST00000380443 PCK1P35558 622 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 PPP2R2AP63151 447 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 LLGL1Q15334 1064 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 TAZQ16635 292 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 C17orf99Q6UX52 265 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 NKD2Q969F2 451 aaPredicted RBP24.33■■□□□ 1.48
VPS16-201ENST00000380443 NCAPGQ9BPX3 1015 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 SEMA4AQ9H3S1 761 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 HMGXB4Q9UGU5 601 aa24.33■■□□□ 1.48
VPS16-201ENST00000380443 KPNA6O60684 536 aa24.32■■□□□ 1.48
VPS16-201ENST00000380443 RNF8O76064 485 aa24.32■■□□□ 1.48
VPS16-201ENST00000380443 KLRC2P26717 231 aa24.32■■□□□ 1.48
VPS16-201ENST00000380443 SLC25A11Q02978 314 aaKnown RBP24.32■■□□□ 1.48
VPS16-201ENST00000380443 CRHR2Q13324 411 aa24.32■■□□□ 1.48
VPS16-201ENST00000380443 ATP13A4Q4VNC1 1196 aa24.32■■□□□ 1.48
VPS16-201ENST00000380443 DNAJC21Q5F1R6 531 aaKnown RBP24.32■■□□□ 1.48
VPS16-201ENST00000380443 TRIM6Q9C030 488 aaPredicted RBP24.32■■□□□ 1.48
VPS16-201ENST00000380443 BCCIPQ9P287 314 aaKnown RBP eCLIP24.32■■□□□ 1.48
VPS16-201ENST00000380443 LRRD1A4D1F6 860 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 TP73O15350 636 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 LRCH4O75427 683 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 ITGAVP06756 1048 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 FGFR4P22455 802 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 ITGA8P53708 1063 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 PRAMEF19Q5SWL8 479 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 GSTA5Q7RTV2 222 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 JOSD2Q8TAC2 188 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 OSMRQ99650 979 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 METTL5Q9NRN9 209 aaKnown RBP24.31■■□□□ 1.48
VPS16-201ENST00000380443 NOVA2Q9UNW9 492 aaKnown RBP24.31■■□□□ 1.48
VPS16-201ENST00000380443 PI4K2BG5E9Z4 385 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 AGTP01019 485 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 ATP1A2P50993 1020 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 LBX1P52954 281 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 ANKS1BQ7Z6G8 1248 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 STK32AQ8WU08 396 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 RAPGEF5Q92565 580 aa24.31■■□□□ 1.48
VPS16-201ENST00000380443 APBA2Q99767 749 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms