RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CDK4P11802 303 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 PORP16435 677 aaPredicted RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 PTPN2P17706 415 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CDH3P22223 829 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SOX6P35712 828 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 TKTL1P51854 596 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 RARSP54136 660 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GJA9P57773 515 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CDC16Q13042 620 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 PPP2R5EQ16537 467 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 PTPN21Q16825 1174 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 PDCD4Q53EL6 469 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SLC44A4Q53GD3 710 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 TPGS2Q68CL5 300 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 TMEM53Q6P2H8 277 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 KLC3Q6P597 504 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 IKBIPQ70UQ0 350 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GPR155Q7Z3F1 870 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 RALYLQ86SE5 291 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 EXOC3L1Q86VI1 746 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GATAD2AQ86YP4 633 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC83Q8IWF9 413 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 NUP93Q8N1F7 819 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 IGSF22Q8N9C0 903 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SLC44A5Q8NCS7 719 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 MOSPD2Q8NHP6 518 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 DQX1Q8TE96 717 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 DDX1Q92499 740 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CASP10Q92851 521 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 TRIM43Q96BQ3 446 aaPredicted RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 DHX58Q96C10 678 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF570Q96NI8 536 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 YME1L1Q96TA2 773 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 DDX50Q9BQ39 737 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 TUBA1CQ9BQE3 449 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 LLPHQ9BRT6 129 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 OSBPL1AQ9BXW6 950 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 ANKZF1Q9H8Y5 726 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SLC28A3Q9HAS3 691 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 DLL3Q9NYJ7 618 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 LRRC42Q9Y546 428 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 K7EPI3 171 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 PDPK1O15530 556 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GJB3O75712 270 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 ELNP15502 786 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 RAG1P15918 1043 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GNL1P36915 607 aaPredicted RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 AP3M2P53677 418 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CASP7P55210 303 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 ERVK-21P61565 698 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 B2MP61769 119 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GSTO1P78417 241 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 ATP2B2Q01814 1243 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SCARB2Q14108 478 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GNA13Q14344 377 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GCKRQ14397 625 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 C15orf59Q2T9L4 293 aaPredicted RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 AARDQ4LEZ3 155 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 C9orf50Q5SZB4 431 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 APOBEC3HQ6NTF7 200 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CNNM4Q6P4Q7 775 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 TMEM154Q6P9G4 183 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 UBALD2Q8IYN6 164 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 ASB12Q8WXK4 309 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SDCCAG3Q96C92 435 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SUCLG2Q96I99 432 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CCT7Q99832 543 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SLF1Q9BQI6 1058 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 CENPHQ9H3R5 247 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 UBN1Q9NPG3 1134 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 FKBP14Q9NWM8 211 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 GRID1Q9ULK0 1009 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 AOX1Q06278 1338 aa5.34□□□□□ -1.56
UBE3D-202ENST00000369746 WDR19Q8NEZ3 1342 aa5.34□□□□□ -1.56
UBE3D-202ENST00000369746 KIF28PB7ZC32 967 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CUTAO60888 179 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PFDN1O60925 122 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 USP1O94782 785 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 POP4O95707 220 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 FAM107AO95990 144 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 FGBP02675 491 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ASGR2P07307 311 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 GAP43P17677 238 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CALB2P22676 271 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SFPQP23246 707 aaKnown RBP eCLIP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ETV1P50549 477 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ARHGDIBP52566 201 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 DSTNP60981 165 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TMPRSS15P98073 1019 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SHC2P98077 582 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 MYO1EQ12965 1108 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 KRT32Q14532 448 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TAF5Q15542 800 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PCSK7Q16549 785 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SWI5Q1ZZU3 235 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 MINDY4Q4G0A6 757 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ALS2CLQ60I27 953 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 MAMDC4Q6UXC1 1216 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CEP128Q6ZU80 1094 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms