RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Gm10717D3Z1I8 228 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Cacna2d1O08532 1103 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Klf1P46099 358 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Psmc1P62192 440 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Cdh8P97291 799 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Adamts1P97857 968 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Fam171bQ14CH0 825 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Pik3r6Q3U6Q4 756 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Upf3bQ3ULL6 472 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Nlrc4Q3UP24 1024 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 4933416C03RikQ3V063 378 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 HecaQ3V1N5 544 aaKnown RBP12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Zfp791Q497V9 528 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Grik1Q60934 836 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Eif2b4Q61749 524 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Sval3Q76I99 144 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Trim17Q7TPM3 477 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Bank1Q80VH0 783 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Tmem108Q8BHE4 574 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Traf3ip3Q8C0G2 513 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Tmprss4Q8VCA5 435 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Lims2Q91XD2 341 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Tab2Q99K90 693 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Tpgs1Q99MS8 303 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Filip1Q9CS72 1211 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Smg9Q9DB90 520 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Rassf7Q9DD19 359 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Dkc1Q9ESX5 509 aaKnown RBP12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Tnni1Q9WUZ5 187 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Sh3bgrQ9WUZ7 214 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Sema4fQ9Z123 777 aa12.92□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Cacna1eQ61290 2272 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Rabgap1lA6H6A9 815 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Bin1O08539 588 aaKnown RBP12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Aoc3O70423 765 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Cd160O88875 185 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Alkbh1P0CB42 389 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Gnat1P20612 350 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Anxa5P48036 319 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Btg3P50615 252 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Irf7P70434 457 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Krt80Q0VBK2 452 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Bbof1Q3V079 533 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Srbd1Q497V5 1015 aaKnown RBP12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Oca2Q62052 833 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Runx3Q64131 409 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Cachd1Q6PDJ1 1288 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Lats2Q7TSJ6 1042 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Ankrd24Q80VM7 985 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Ddx10Q80Y44 875 aaKnown RBP12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Fndc3aQ8BX90 1198 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Znf276Q8CE64 614 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Pym1Q8CHP5 203 aaKnown RBP12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Zmiz2Q8CIE2 920 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Taf6lQ8R2K4 616 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Lrrc14Q8VC16 493 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 RabepkQ8VCH5 380 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 CbsQ91WT9 561 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 AjubaQ91XC0 547 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Pcdha1Q91Y21 948 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Ggt7Q99JP7 662 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 TrabdQ99JY4 376 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Syce1Q9D495 329 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Insl5Q9WUG6 135 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Sept5Q9Z2Q6 369 aa12.91□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 SpaarA0A1B0GSZ0 75 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Gm5485A0A1D5RM98 91 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Hes2O54792 157 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Slc2a4P14142 509 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Kcnj2P35561 428 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Hspa4lP48722 838 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Gabrr2P56476 465 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Zhx1P70121 873 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Rab33aP97950 237 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Ptgs2Q05769 604 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Cntn3Q07409 1028 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Zbtb16Q3UQ17 673 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 PkdccQ5RJI4 492 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 BadQ61337 204 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 EregQ61521 162 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Pde1cQ64338 706 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Anks1bQ8BIZ1 1259 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Osbpl6Q8BXR9 959 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 CgasQ8C6L5 507 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Hmgcll1Q8JZS7 343 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Ces2aQ8QZR3 558 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Dnttip2Q8R2M2 758 aaKnown RBP12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Mrps2Q924T2 291 aaKnown RBP12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Cxxc1Q9CWW7 660 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Fthl17aQ9DAX0 182 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Noc2lQ9WV70 747 aaKnown RBP12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Asb3Q9WV72 525 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Slc26a3Q9WVC8 757 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Clcn5Q9WVD4 746 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Slc12a7Q9WVL3 1083 aa12.9□□□□□ -0.34
Ccdc28a-202ENSMUST00000080860 Mcm3apQ9WUU9 1971 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 2210011C24RikA0A087WQ89 206 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 1700031M16RikA0A087WSH0 82 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Igkv5-43A0A0B4J1J2 115 aa12.89□□□□□ -0.35
Ccdc28a-202ENSMUST00000080860 Zscan4-ps2A0A1C7CYU6 506 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms