Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Gm25239-201ENSMUST00000174915 86 ntBASIC39.77■■■■□ 3.96
Hmgcll1Q8JZS7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
Hmgcll1Q8JZS7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Hmgcll1Q8JZS7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Hmgcll1Q8JZS7 Gm15042-201ENSMUST00000120212 883 ntBASIC34.89■■■■□ 3.18
Hmgcll1Q8JZS7 Gm24109-201ENSMUST00000175489 103 ntBASIC34.41■■■■□ 3.1
Hmgcll1Q8JZS7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Hmgcll1Q8JZS7 Gm15045-201ENSMUST00000117359 883 ntBASIC34.18■■■■□ 3.06
Hmgcll1Q8JZS7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.88■■■■□ 3.01
Hmgcll1Q8JZS7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Hmgcll1Q8JZS7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.96
Hmgcll1Q8JZS7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Hmgcll1Q8JZS7 Gm23366-201ENSMUST00000175022 89 ntBASIC33.22■■■□□ 2.91
Hmgcll1Q8JZS7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Hmgcll1Q8JZS7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Hmgcll1Q8JZS7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.68■■■□□ 2.82
Hmgcll1Q8JZS7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Hmgcll1Q8JZS7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Hmgcll1Q8JZS7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Hmgcll1Q8JZS7 Psd-208ENSMUST00000224556 2034 ntBASIC32.31■■■□□ 2.76
Hmgcll1Q8JZS7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Hmgcll1Q8JZS7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
Hmgcll1Q8JZS7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Hmgcll1Q8JZS7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Hmgcll1Q8JZS7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
Hmgcll1Q8JZS7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Hmgcll1Q8JZS7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.03■■■□□ 2.72
Hmgcll1Q8JZS7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.95■■■□□ 2.7
Hmgcll1Q8JZS7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.84■■■□□ 2.69
Hmgcll1Q8JZS7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Hmgcll1Q8JZS7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.61■■■□□ 2.65
Hmgcll1Q8JZS7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Hmgcll1Q8JZS7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hmgcll1Q8JZS7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Hmgcll1Q8JZS7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.42■■■□□ 2.62
Hmgcll1Q8JZS7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hmgcll1Q8JZS7 Gm25238-201ENSMUST00000174914 89 ntBASIC31.36■■■□□ 2.61
Hmgcll1Q8JZS7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Hmgcll1Q8JZS7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.28■■■□□ 2.6
Hmgcll1Q8JZS7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Hmgcll1Q8JZS7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Hmgcll1Q8JZS7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Hmgcll1Q8JZS7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hmgcll1Q8JZS7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.83■■■□□ 2.53
Hmgcll1Q8JZS7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Hmgcll1Q8JZS7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Hmgcll1Q8JZS7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
Hmgcll1Q8JZS7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.68■■■□□ 2.5
Hmgcll1Q8JZS7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Hmgcll1Q8JZS7 Gm27325-201ENSMUST00000175467 74 ntBASIC30.63■■■□□ 2.49
Hmgcll1Q8JZS7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.6■■■□□ 2.49
Hmgcll1Q8JZS7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hmgcll1Q8JZS7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Hmgcll1Q8JZS7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Hmgcll1Q8JZS7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.41■■■□□ 2.46
Hmgcll1Q8JZS7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Hmgcll1Q8JZS7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.3■■■□□ 2.44
Hmgcll1Q8JZS7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
Hmgcll1Q8JZS7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.29■■■□□ 2.44
Hmgcll1Q8JZS7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Hmgcll1Q8JZS7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Hmgcll1Q8JZS7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.15■■■□□ 2.42
Hmgcll1Q8JZS7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Hmgcll1Q8JZS7 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.1■■■□□ 2.41
Hmgcll1Q8JZS7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Hmgcll1Q8JZS7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hmgcll1Q8JZS7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hmgcll1Q8JZS7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hmgcll1Q8JZS7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Hmgcll1Q8JZS7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30■■■□□ 2.39
Hmgcll1Q8JZS7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Hmgcll1Q8JZS7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Hmgcll1Q8JZS7 Rab21-202ENSMUST00000218831 843 ntBASIC29.96■■■□□ 2.39
Hmgcll1Q8JZS7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Hmgcll1Q8JZS7 Gm25262-201ENSMUST00000174934 133 ntBASIC29.92■■■□□ 2.38
Hmgcll1Q8JZS7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Hmgcll1Q8JZS7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.84■■■□□ 2.37
Hmgcll1Q8JZS7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.83■■■□□ 2.37
Hmgcll1Q8JZS7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Hmgcll1Q8JZS7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.76■■■□□ 2.35
Hmgcll1Q8JZS7 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.71■■■□□ 2.35
Hmgcll1Q8JZS7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Hmgcll1Q8JZS7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Hmgcll1Q8JZS7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Hmgcll1Q8JZS7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.58■■■□□ 2.33
Hmgcll1Q8JZS7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Hmgcll1Q8JZS7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Hmgcll1Q8JZS7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Hmgcll1Q8JZS7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Hmgcll1Q8JZS7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.47■■■□□ 2.31
Hmgcll1Q8JZS7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.43■■■□□ 2.3
Hmgcll1Q8JZS7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Hmgcll1Q8JZS7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Hmgcll1Q8JZS7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
Hmgcll1Q8JZS7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Hmgcll1Q8JZS7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.29■■■□□ 2.28
Hmgcll1Q8JZS7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Hmgcll1Q8JZS7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Hmgcll1Q8JZS7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Hmgcll1Q8JZS7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.18■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms