Protein–RNA interactions for Protein: A0A087WSH0

1700031M16Rik, RIKEN cDNA 1700031M16 gene, mousemouse

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700031M16RikA0A087WSH0 Gm25239-201ENSMUST00000174915 86 ntBASIC39,98■■■■□ 3,99
1700031M16RikA0A087WSH0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36,85■■■■□ 3,49
1700031M16RikA0A087WSH0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,4
1700031M16RikA0A087WSH0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35,9■■■■□ 3,34
1700031M16RikA0A087WSH0 Gm15042-201ENSMUST00000120212 883 ntBASIC35,19■■■■□ 3,22
1700031M16RikA0A087WSH0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35,05■■■■□ 3,2
1700031M16RikA0A087WSH0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34,67■■■■□ 3,14
1700031M16RikA0A087WSH0 Gm24109-201ENSMUST00000175489 103 ntBASIC34,53■■■■□ 3,12
1700031M16RikA0A087WSH0 Gm15045-201ENSMUST00000117359 883 ntBASIC34,48■■■■□ 3,11
1700031M16RikA0A087WSH0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
1700031M16RikA0A087WSH0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33,7■■■□□ 2,99
1700031M16RikA0A087WSH0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,66■■■□□ 2,98
1700031M16RikA0A087WSH0 Gm23366-201ENSMUST00000175022 89 ntBASIC33,39■■■□□ 2,94
1700031M16RikA0A087WSH0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33,37■■■□□ 2,93
1700031M16RikA0A087WSH0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,21■■■□□ 2,91
1700031M16RikA0A087WSH0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,21■■■□□ 2,91
1700031M16RikA0A087WSH0 Psd-208ENSMUST00000224556 2034 ntBASIC33,19■■■□□ 2,9
1700031M16RikA0A087WSH0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,89■■■□□ 2,86
1700031M16RikA0A087WSH0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,86■■■□□ 2,85
1700031M16RikA0A087WSH0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32,85■■■□□ 2,85
1700031M16RikA0A087WSH0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
1700031M16RikA0A087WSH0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
1700031M16RikA0A087WSH0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,65■■■□□ 2,82
1700031M16RikA0A087WSH0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,6■■■□□ 2,81
1700031M16RikA0A087WSH0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,42■■■□□ 2,78
1700031M16RikA0A087WSH0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,42■■■□□ 2,78
1700031M16RikA0A087WSH0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,4■■■□□ 2,78
1700031M16RikA0A087WSH0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,4■■■□□ 2,78
1700031M16RikA0A087WSH0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32,32■■■□□ 2,76
1700031M16RikA0A087WSH0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32,1■■■□□ 2,73
1700031M16RikA0A087WSH0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32,07■■■□□ 2,72
1700031M16RikA0A087WSH0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31,99■■■□□ 2,71
1700031M16RikA0A087WSH0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,91■■■□□ 2,7
1700031M16RikA0A087WSH0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
1700031M16RikA0A087WSH0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,81■■■□□ 2,68
1700031M16RikA0A087WSH0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31,68■■■□□ 2,66
1700031M16RikA0A087WSH0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
1700031M16RikA0A087WSH0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
1700031M16RikA0A087WSH0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31,49■■■□□ 2,63
1700031M16RikA0A087WSH0 Gm25238-201ENSMUST00000174914 89 ntBASIC31,48■■■□□ 2,63
1700031M16RikA0A087WSH0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31,42■■■□□ 2,62
1700031M16RikA0A087WSH0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
1700031M16RikA0A087WSH0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31,35■■■□□ 2,61
1700031M16RikA0A087WSH0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31,32■■■□□ 2,6
1700031M16RikA0A087WSH0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,3■■■□□ 2,6
1700031M16RikA0A087WSH0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,29■■■□□ 2,6
1700031M16RikA0A087WSH0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
1700031M16RikA0A087WSH0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
1700031M16RikA0A087WSH0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,14■■■□□ 2,58
1700031M16RikA0A087WSH0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
1700031M16RikA0A087WSH0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
1700031M16RikA0A087WSH0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
1700031M16RikA0A087WSH0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,94■■■□□ 2,54
1700031M16RikA0A087WSH0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,88■■■□□ 2,53
1700031M16RikA0A087WSH0 Gm27325-201ENSMUST00000175467 74 ntBASIC30,87■■■□□ 2,53
1700031M16RikA0A087WSH0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30,86■■■□□ 2,53
1700031M16RikA0A087WSH0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30,8■■■□□ 2,52
1700031M16RikA0A087WSH0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
1700031M16RikA0A087WSH0 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,74■■■□□ 2,51
1700031M16RikA0A087WSH0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
1700031M16RikA0A087WSH0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,64■■■□□ 2,5
1700031M16RikA0A087WSH0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
1700031M16RikA0A087WSH0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,56■■■□□ 2,48
1700031M16RikA0A087WSH0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30,54■■■□□ 2,48
1700031M16RikA0A087WSH0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,51■■■□□ 2,47
1700031M16RikA0A087WSH0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,47
1700031M16RikA0A087WSH0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30,46■■■□□ 2,47
1700031M16RikA0A087WSH0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30,44■■■□□ 2,46
1700031M16RikA0A087WSH0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
1700031M16RikA0A087WSH0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,42■■■□□ 2,46
1700031M16RikA0A087WSH0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
1700031M16RikA0A087WSH0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,35■■■□□ 2,45
1700031M16RikA0A087WSH0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
1700031M16RikA0A087WSH0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30,32■■■□□ 2,44
1700031M16RikA0A087WSH0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
1700031M16RikA0A087WSH0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30,27■■■□□ 2,44
1700031M16RikA0A087WSH0 Gm42596-201ENSMUST00000196305 1958 ntBASIC30,26■■■□□ 2,43
1700031M16RikA0A087WSH0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30,15■■■□□ 2,42
1700031M16RikA0A087WSH0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
1700031M16RikA0A087WSH0 Rab21-202ENSMUST00000218831 843 ntBASIC30,12■■■□□ 2,41
1700031M16RikA0A087WSH0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,1■■■□□ 2,41
1700031M16RikA0A087WSH0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,09■■■□□ 2,41
1700031M16RikA0A087WSH0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30,05■■■□□ 2,4
1700031M16RikA0A087WSH0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30■■■□□ 2,39
1700031M16RikA0A087WSH0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29,99■■■□□ 2,39
1700031M16RikA0A087WSH0 Gm25262-201ENSMUST00000174934 133 ntBASIC29,96■■■□□ 2,39
1700031M16RikA0A087WSH0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29,89■■■□□ 2,38
1700031M16RikA0A087WSH0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
1700031M16RikA0A087WSH0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29,84■■■□□ 2,37
1700031M16RikA0A087WSH0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29,83■■■□□ 2,37
1700031M16RikA0A087WSH0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29,79■■■□□ 2,36
1700031M16RikA0A087WSH0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,78■■■□□ 2,36
1700031M16RikA0A087WSH0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,75■■■□□ 2,35
1700031M16RikA0A087WSH0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
1700031M16RikA0A087WSH0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
1700031M16RikA0A087WSH0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,34
1700031M16RikA0A087WSH0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,64■■■□□ 2,34
1700031M16RikA0A087WSH0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,61■■■□□ 2,33
1700031M16RikA0A087WSH0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
1700031M16RikA0A087WSH0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms