RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Patl2A2ARM1 529 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gbp4A4UUI3 631 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm3095E9Q058 166 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Hmgxb3G3X9M3 1254 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 WapP01173 134 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ezh2Q61188 746 aaKnown RBP17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sema5aQ62217 1077 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ccdc151Q8BSN3 593 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Pcdhb1Q91Y08 818 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 GzmnQ920S1 248 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Slxl1Q9D515 155 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm379J3QQ19 296 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Msh3P13705 1091 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Psmc6P62334 389 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Serping1P97290 504 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Muc1Q02496 630 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Hspa1aQ61696 641 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rbl2Q64700 1135 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 4921511C20RikQ8BVT7 469 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Taf11Q99JX1 211 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 OoepQ9CWE6 164 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Bmp15Q9Z0L4 392 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Usp32F8VPZ3 1604 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ccdc8D3YZV8 685 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 2610008E11RikG3X964 669 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 NfibP97863 570 aaKnown RBP17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Serpina1eQ00898 413 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tmem237Q3V0J1 427 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Chsy1Q6ZQ11 800 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Mical2Q8BML1 960 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rccd1Q8BTU7 377 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Bhmt2Q91WS4 363 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Wdr72D3YYM4 1114 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cyp2j6O54750 501 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Akap10O88845 662 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tp53P02340 387 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rrp36Q3UFY0 244 aaKnown RBP17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rnaseh2bQ80ZV0 308 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ccdc103Q9D9P2 237 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gprc5dQ9JIL6 344 aa17.26■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Atf6F6VAN0 656 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Vmn2r77L7N2B7 854 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cyp2d34L7N463 504 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Kcna5Q61762 602 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Kcnv1Q8BZN2 503 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Alg9Q8VDI9 611 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Nme5Q99MH5 211 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 MydgfQ9CPT4 166 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ndufaf1Q9CWX2 328 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tmem59Q9QY73 323 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Hmgcs2P54869 508 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 GsapQ3TCV3 858 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Xlr3cQ61806 226 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Krt73Q6NXH9 539 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Catsper3Q80W99 395 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tcaf1Q8BNE1 924 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Art3Q8R2G4 371 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Taf6lQ8R2K4 616 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Mmtag2Q99LX5 260 aaKnown RBP17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sdccag3A2AIW0 432 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm5152L7N200 190 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Magea8O89012 320 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ccnd2P30280 289 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Mapre1Q61166 268 aaKnown RBP17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Slitrk1Q810C1 696 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Mlc1Q8VHK5 382 aa17.25■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rsrc2A2RTL5 376 aaKnown RBP17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 1700024B05RikE9Q6D7 167 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 2210016F16RikG3X8U3 338 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Akr1b10G5E895 316 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Rgs4O08899 205 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Atoh1P48985 351 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Colgalt1Q8K297 617 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Pkp3Q9QY23 797 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 RecqlQ9Z129 648 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm3173A6NAS3 172 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm3020E9Q3J7 150 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm2897K7N6T7 172 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Apoa4P06728 395 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Sparcl1P70663 650 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Zfp953Q3UPV7 304 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Them6Q80ZW2 207 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Zmym6Q8BS54 1249 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Gm3411Q8C7R2 150 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Pcdhgc5Q91XW9 944 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Lsm7Q9CQQ8 103 aaKnown RBP17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Phtf1Q9QZ09 761 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 AglF8VPN4 1532 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Spin2fJ3QPU0 254 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Tbx3P70324 741 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Oas1fQ14AZ4 364 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Mcm9Q2KHI9 1134 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Klra6Q60653 266 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ksr1Q61097 873 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ddx5Q61656 614 aaKnown RBP17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Ticam2Q8BJQ4 232 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Trpa1Q8BLA8 1125 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 CopaQ8CIE6 1224 aaKnown RBP17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Scube2Q9JJS0 997 aa17.24■□□□□ 0.35
Ubfd1-201ENSMUST00000033158 Cdc42bpbQ7TT50 1713 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms