Protein–RNA interactions for Protein: Q9JJS0

Scube2, Signal peptide, CUB and EGF-like domain-containing protein 2, mousemouse

Predictions only

Length 997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube2Q9JJS0 Gm25239-201ENSMUST00000174915 86 ntBASIC39.08■■■■□ 3.85
Scube2Q9JJS0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
Scube2Q9JJS0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Scube2Q9JJS0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Scube2Q9JJS0 Gm15042-201ENSMUST00000120212 883 ntBASIC34.39■■■■□ 3.1
Scube2Q9JJS0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Scube2Q9JJS0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.73■■■□□ 2.99
Scube2Q9JJS0 Gm15045-201ENSMUST00000117359 883 ntBASIC33.64■■■□□ 2.98
Scube2Q9JJS0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.96
Scube2Q9JJS0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Scube2Q9JJS0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Scube2Q9JJS0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Scube2Q9JJS0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.7■■■□□ 2.83
Scube2Q9JJS0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Scube2Q9JJS0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Scube2Q9JJS0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.29■■■□□ 2.76
Scube2Q9JJS0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Scube2Q9JJS0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Scube2Q9JJS0 Psd-208ENSMUST00000224556 2034 ntBASIC32.01■■■□□ 2.71
Scube2Q9JJS0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Scube2Q9JJS0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Scube2Q9JJS0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Scube2Q9JJS0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Scube2Q9JJS0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Scube2Q9JJS0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
Scube2Q9JJS0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Scube2Q9JJS0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.57■■■□□ 2.64
Scube2Q9JJS0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.53■■■□□ 2.64
Scube2Q9JJS0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Scube2Q9JJS0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.23■■■□□ 2.59
Scube2Q9JJS0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Scube2Q9JJS0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.07■■■□□ 2.56
Scube2Q9JJS0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
Scube2Q9JJS0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Scube2Q9JJS0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Scube2Q9JJS0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Scube2Q9JJS0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Scube2Q9JJS0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Scube2Q9JJS0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.76■■■□□ 2.51
Scube2Q9JJS0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.76■■■□□ 2.51
Scube2Q9JJS0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scube2Q9JJS0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.52■■■□□ 2.48
Scube2Q9JJS0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Scube2Q9JJS0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Scube2Q9JJS0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Scube2Q9JJS0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Scube2Q9JJS0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Scube2Q9JJS0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Scube2Q9JJS0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.21■■■□□ 2.43
Scube2Q9JJS0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
Scube2Q9JJS0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.19■■■□□ 2.42
Scube2Q9JJS0 Gm27325-201ENSMUST00000175467 74 ntBASIC30.17■■■□□ 2.42
Scube2Q9JJS0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Scube2Q9JJS0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Scube2Q9JJS0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Scube2Q9JJS0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Scube2Q9JJS0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.91■■■□□ 2.38
Scube2Q9JJS0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.88■■■□□ 2.37
Scube2Q9JJS0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Scube2Q9JJS0 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.86■■■□□ 2.37
Scube2Q9JJS0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Scube2Q9JJS0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.82■■■□□ 2.36
Scube2Q9JJS0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Scube2Q9JJS0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Scube2Q9JJS0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.75■■■□□ 2.35
Scube2Q9JJS0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Scube2Q9JJS0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Scube2Q9JJS0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Scube2Q9JJS0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Scube2Q9JJS0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Scube2Q9JJS0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Scube2Q9JJS0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
Scube2Q9JJS0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Scube2Q9JJS0 Rab21-202ENSMUST00000218831 843 ntBASIC29.48■■■□□ 2.31
Scube2Q9JJS0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.46■■■□□ 2.31
Scube2Q9JJS0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Scube2Q9JJS0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.39■■■□□ 2.3
Scube2Q9JJS0 Gm25262-201ENSMUST00000174934 133 ntBASIC29.39■■■□□ 2.3
Scube2Q9JJS0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Scube2Q9JJS0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.37■■■□□ 2.29
Scube2Q9JJS0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Scube2Q9JJS0 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.35■■■□□ 2.29
Scube2Q9JJS0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Scube2Q9JJS0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Scube2Q9JJS0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Scube2Q9JJS0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Scube2Q9JJS0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Scube2Q9JJS0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Scube2Q9JJS0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.03■■■□□ 2.24
Scube2Q9JJS0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.02■■■□□ 2.24
Scube2Q9JJS0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Scube2Q9JJS0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29■■■□□ 2.23
Scube2Q9JJS0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Scube2Q9JJS0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scube2Q9JJS0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scube2Q9JJS0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scube2Q9JJS0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.87■■■□□ 2.21
Scube2Q9JJS0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Scube2Q9JJS0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Scube2Q9JJS0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.82■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms