Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Gm25239-201ENSMUST00000174915 86 ntBASIC44.37■■■■■ 4.69
Hmgcs2P54869 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.13■■■■■ 4.17
Hmgcs2P54869 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
Hmgcs2P54869 Gm15042-201ENSMUST00000120212 883 ntBASIC38.58■■■■□ 3.77
Hmgcs2P54869 Gm24109-201ENSMUST00000175489 103 ntBASIC38.53■■■■□ 3.76
Hmgcs2P54869 Gm15045-201ENSMUST00000117359 883 ntBASIC37.69■■■■□ 3.62
Hmgcs2P54869 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Hmgcs2P54869 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
Hmgcs2P54869 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Hmgcs2P54869 Gm23366-201ENSMUST00000175022 89 ntBASIC37.02■■■■□ 3.52
Hmgcs2P54869 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Hmgcs2P54869 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
Hmgcs2P54869 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Hmgcs2P54869 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.03■■■■□ 3.36
Hmgcs2P54869 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Hmgcs2P54869 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
Hmgcs2P54869 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.75■■■■□ 3.31
Hmgcs2P54869 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.65■■■■□ 3.3
Hmgcs2P54869 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
Hmgcs2P54869 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Hmgcs2P54869 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.36■■■■□ 3.25
Hmgcs2P54869 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Hmgcs2P54869 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Hmgcs2P54869 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.23■■■■□ 3.23
Hmgcs2P54869 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Hmgcs2P54869 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Hmgcs2P54869 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Hmgcs2P54869 Gm25238-201ENSMUST00000174914 89 ntBASIC35.09■■■■□ 3.21
Hmgcs2P54869 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.06■■■■□ 3.2
Hmgcs2P54869 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Hmgcs2P54869 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.83■■■■□ 3.17
Hmgcs2P54869 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
Hmgcs2P54869 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.54■■■■□ 3.12
Hmgcs2P54869 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Hmgcs2P54869 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.36■■■■□ 3.09
Hmgcs2P54869 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Hmgcs2P54869 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
Hmgcs2P54869 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
Hmgcs2P54869 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.08■■■■□ 3.05
Hmgcs2P54869 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Hmgcs2P54869 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.97■■■■□ 3.03
Hmgcs2P54869 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.92■■■■□ 3.02
Hmgcs2P54869 Psd-208ENSMUST00000224556 2034 ntBASIC33.91■■■■□ 3.02
Hmgcs2P54869 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.82■■■■□ 3
Hmgcs2P54869 Gm27325-201ENSMUST00000175467 74 ntBASIC33.76■■■□□ 2.99
Hmgcs2P54869 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.69■■■□□ 2.98
Hmgcs2P54869 Gm25262-201ENSMUST00000174934 133 ntBASIC33.68■■■□□ 2.98
Hmgcs2P54869 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Hmgcs2P54869 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
Hmgcs2P54869 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Hmgcs2P54869 Rab21-202ENSMUST00000218831 843 ntBASIC33.28■■■□□ 2.92
Hmgcs2P54869 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Hmgcs2P54869 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.2■■■□□ 2.91
Hmgcs2P54869 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.18■■■□□ 2.9
Hmgcs2P54869 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Hmgcs2P54869 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC33.16■■■□□ 2.9
Hmgcs2P54869 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.16■■■□□ 2.9
Hmgcs2P54869 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Hmgcs2P54869 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.08■■■□□ 2.89
Hmgcs2P54869 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
Hmgcs2P54869 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Hmgcs2P54869 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.01■■■□□ 2.87
Hmgcs2P54869 Gm26115-201ENSMUST00000175605 87 ntBASIC32.93■■■□□ 2.86
Hmgcs2P54869 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Hmgcs2P54869 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Hmgcs2P54869 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
Hmgcs2P54869 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.86■■■□□ 2.85
Hmgcs2P54869 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Hmgcs2P54869 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Hmgcs2P54869 Gm8109-201ENSMUST00000194076 746 ntBASIC32.74■■■□□ 2.83
Hmgcs2P54869 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Hmgcs2P54869 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.71■■■□□ 2.83
Hmgcs2P54869 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.71■■■□□ 2.83
Hmgcs2P54869 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Hmgcs2P54869 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.66■■■□□ 2.82
Hmgcs2P54869 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Hmgcs2P54869 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hmgcs2P54869 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hmgcs2P54869 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Hmgcs2P54869 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Hmgcs2P54869 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.5■■■□□ 2.79
Hmgcs2P54869 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hmgcs2P54869 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Hmgcs2P54869 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Hmgcs2P54869 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Hmgcs2P54869 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.31■■■□□ 2.76
Hmgcs2P54869 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Hmgcs2P54869 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hmgcs2P54869 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Hmgcs2P54869 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Hmgcs2P54869 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.16■■■□□ 2.74
Hmgcs2P54869 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Hmgcs2P54869 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.12■■■□□ 2.73
Hmgcs2P54869 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Hmgcs2P54869 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Hmgcs2P54869 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.11■■■□□ 2.73
Hmgcs2P54869 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
Hmgcs2P54869 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Hmgcs2P54869 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.02■■■□□ 2.72
Hmgcs2P54869 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms