RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C SLM6P38343 150 aa0.6□□□□□ -2.31
CMS1YLR003C FMN1Q03778 218 aa0.6□□□□□ -2.31
CMS1YLR003C HYP2P23301 157 aaKnown RBP0.59□□□□□ -2.31
CMS1YLR003C AME1P38313 324 aa0.59□□□□□ -2.31
CMS1YLR003C IPT1P38954 527 aa0.59□□□□□ -2.31
CMS1YLR003C DLS1P40366 167 aa0.59□□□□□ -2.31
CMS1YLR003C FIP1P45976 327 aa0.59□□□□□ -2.31
CMS1YLR003C YDR102CQ03864 110 aa0.59□□□□□ -2.31
CMS1YLR003C NMA1Q06178 401 aaKnown RBP0.59□□□□□ -2.31
CMS1YLR003C RME1P32338 300 aaKnown RBP0.58□□□□□ -2.32
CMS1YLR003C APQ12P40532 138 aa0.58□□□□□ -2.32
CMS1YLR003C RCF2P53721 224 aa0.58□□□□□ -2.32
CMS1YLR003C PBI2P0CT04 75 aaKnown RBP0.57□□□□□ -2.32
CMS1YLR003C SED1Q01589 338 aa0.57□□□□□ -2.32
CMS1YLR003C YOR072WQ08486 104 aa0.57□□□□□ -2.32
CMS1YLR003C YHR213W-BQ8TGK1 99 aa0.57□□□□□ -2.32
CMS1YLR003C MRS4P23500 304 aa0.56□□□□□ -2.32
CMS1YLR003C MGR2Q02889 113 aa0.56□□□□□ -2.32
CMS1YLR003C YPR153WQ06537 140 aa0.56□□□□□ -2.32
CMS1YLR003C RRT7Q07829 113 aa0.56□□□□□ -2.32
CMS1YLR003C RFU1Q08003 200 aa0.56□□□□□ -2.32
CMS1YLR003C HAP2P06774 265 aa0.55□□□□□ -2.32
CMS1YLR003C PHO13P19881 312 aa0.55□□□□□ -2.32
CMS1YLR003C DER1P38307 211 aa0.55□□□□□ -2.32
CMS1YLR003C YJL218WP40892 196 aaKnown RBP0.55□□□□□ -2.32
CMS1YLR003C ATP19P81451 68 aa0.55□□□□□ -2.32
CMS1YLR003C TLG1Q03322 224 aa0.55□□□□□ -2.32
CMS1YLR003C YPD1Q07688 167 aa0.55□□□□□ -2.32
CMS1YLR003C ROM2P51862 1356 aaKnown RBP0.55□□□□□ -2.32
CMS1YLR003C GLC8P41818 229 aa0.54□□□□□ -2.32
CMS1YLR003C IRC19Q07843 230 aa0.54□□□□□ -2.32
CMS1YLR003C RPL33AP05744 107 aaKnown RBP0.53□□□□□ -2.32
CMS1YLR003C RPS22AP0C0W1 130 aaKnown RBP0.53□□□□□ -2.32
CMS1YLR003C MRPL24P36525 258 aaPredicted RBP0.53□□□□□ -2.32
CMS1YLR003C YER181CP40097 107 aa0.53□□□□□ -2.32
CMS1YLR003C RPS22BQ3E7Y3 130 aaKnown RBP0.53□□□□□ -2.32
CMS1YLR003C CDC39P25655 2108 aaKnown RBP0.53□□□□□ -2.32
CMS1YLR003C NHP6AP11632 93 aaKnown RBP0.52□□□□□ -2.33
CMS1YLR003C HHY1P39982 102 aa0.52□□□□□ -2.33
CMS1YLR003C GPI11Q06636 219 aa0.52□□□□□ -2.33
CMS1YLR003C SRP21P32342 167 aa0.51□□□□□ -2.33
CMS1YLR003C SRL3P36167 246 aa0.51□□□□□ -2.33
CMS1YLR003C FIG1P38224 298 aa0.51□□□□□ -2.33
CMS1YLR003C GPI2P46961 280 aa0.51□□□□□ -2.33
CMS1YLR003C YJL009WP47078 108 aa0.51□□□□□ -2.33
CMS1YLR003C EST3Q03096 181 aa0.51□□□□□ -2.33
CMS1YLR003C NSL1Q12143 216 aa0.51□□□□□ -2.33
CMS1YLR003C HUT1Q12520 339 aa0.51□□□□□ -2.33
CMS1YLR003C EFG1Q3E705 233 aaKnown RBP0.51□□□□□ -2.33
CMS1YLR003C PET20Q99373 253 aa0.51□□□□□ -2.33
CMS1YLR003C YOR1P53049 1477 aa0.5□□□□□ -2.33
CMS1YLR003C PRP8P33334 2413 aaKnown RBP0.49□□□□□ -2.33
CMS1YLR003C ATG8P38182 117 aaRIP-Chip data0.49□□□□□ -2.33not detected
CMS1YLR003C DDR48P18899 430 aaKnown RBP0.48□□□□□ -2.33
CMS1YLR003C SCS22Q6Q595 175 aa0.48□□□□□ -2.33
CMS1YLR003C COX5BP00425 151 aa0.47□□□□□ -2.33
CMS1YLR003C YGL014C-AP0C5N1 53 aa0.47□□□□□ -2.33
CMS1YLR003C YMR141CP40211 102 aa0.47□□□□□ -2.33
CMS1YLR003C RAV2Q03956 351 aa0.47□□□□□ -2.33
CMS1YLR003C SEN15Q04675 128 aa0.47□□□□□ -2.33
CMS1YLR003C IRC21Q04772 201 aa0.47□□□□□ -2.33
CMS1YLR003C PET54P10834 293 aa0.45□□□□□ -2.34
CMS1YLR003C HSP12P22943 109 aaKnown RBP0.45□□□□□ -2.34
CMS1YLR003C SUI1P32911 108 aaKnown RBP0.45□□□□□ -2.34
CMS1YLR003C DDP1Q99321 188 aaKnown RBP0.45□□□□□ -2.34
CMS1YLR003C GSC2P40989 1895 aa0.44□□□□□ -2.34
CMS1YLR003C RPS1BP23248 255 aaKnown RBP0.44□□□□□ -2.34
CMS1YLR003C FYV5P25585 152 aa0.44□□□□□ -2.34
CMS1YLR003C DIE2P50076 525 aa0.44□□□□□ -2.34
CMS1YLR003C YMR122CQ03879 124 aa0.44□□□□□ -2.34
CMS1YLR003C SOM1Q05676 74 aa0.44□□□□□ -2.34
CMS1YLR003C RAF1Q06891 181 aa0.44□□□□□ -2.34
CMS1YLR003C RPL43AP0CX25 92 aaKnown RBP0.43□□□□□ -2.34
CMS1YLR003C RPL43BP0CX26 92 aa0.43□□□□□ -2.34
CMS1YLR003C ANB1P19211 157 aa0.43□□□□□ -2.34
CMS1YLR003C IPI1P38803 334 aaPredicted RBP0.43□□□□□ -2.34
CMS1YLR003C LST8P41318 303 aa0.43□□□□□ -2.34
CMS1YLR003C PKR1Q03880 122 aaKnown RBP0.43□□□□□ -2.34
CMS1YLR003C PRM3Q08931 133 aa0.43□□□□□ -2.34
CMS1YLR003C LSM1P47017 172 aaKnown RBP0.42□□□□□ -2.34
CMS1YLR003C COA6Q3E846 104 aa0.42□□□□□ -2.34
CMS1YLR003C RIB3Q99258 208 aa0.42□□□□□ -2.34
CMS1YLR003C YHR213WP0CI67 198 aa0.41□□□□□ -2.34
CMS1YLR003C VMA10P48836 114 aaKnown RBP0.41□□□□□ -2.34
CMS1YLR003C YNL019CP53975 284 aa0.41□□□□□ -2.34
CMS1YLR003C FIT3Q08907 204 aa0.41□□□□□ -2.34
CMS1YLR003C MHF1Q3E835 90 aa0.41□□□□□ -2.34
CMS1YLR003C NMT1P14743 455 aa0.4□□□□□ -2.35
CMS1YLR003C PHB1P40961 287 aa0.4□□□□□ -2.35
CMS1YLR003C SMD2Q06217 110 aaKnown RBP0.4□□□□□ -2.35
CMS1YLR003C LAA1P39526 2014 aa0.39□□□□□ -2.35
CMS1YLR003C YAP3P38749 330 aa0.39□□□□□ -2.35
CMS1YLR003C YGR201CP42936 225 aa0.39□□□□□ -2.35
CMS1YLR003C SPG1P50088 95 aa0.39□□□□□ -2.35
CMS1YLR003C BRP1P53194 125 aa0.39□□□□□ -2.35
CMS1YLR003C HHO1P53551 258 aa0.39□□□□□ -2.35
CMS1YLR003C YCL001W-AP87012 153 aa0.39□□□□□ -2.35
CMS1YLR003C YDR366CP87287 132 aa0.39□□□□□ -2.35
CMS1YLR003C COA4Q05809 96 aa0.39□□□□□ -2.35
CMS1YLR003C YOR385WQ08909 290 aa0.39□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms