RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W MAK3Q03503 176 aa2.91□□□□□ -1.94
SIR1YKR101W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SIR1YKR101W PET54P10834 293 aa2.91□□□□□ -1.94
SIR1YKR101W YEL073CP39974 107 aa2.91□□□□□ -1.94
SIR1YKR101W DIG2Q03373 323 aaKnown RBP2.91□□□□□ -1.94
SIR1YKR101W CSN9Q03981 162 aa2.91□□□□□ -1.94
SIR1YKR101W FZF1P32805 299 aa2.9□□□□□ -1.95
SIR1YKR101W SHE2P36068 246 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
SIR1YKR101W YNL217WP40152 326 aa2.9□□□□□ -1.95
SIR1YKR101W LSM1P47017 172 aaKnown RBP2.9□□□□□ -1.95
SIR1YKR101W DAN1P47178 298 aa2.9□□□□□ -1.95
SIR1YKR101W TMA20P89886 181 aaPredicted RBP2.9□□□□□ -1.95
SIR1YKR101W YMR030W-AQ3E760 96 aa2.9□□□□□ -1.95
SIR1YKR101W RPL2AP0CX45 254 aaKnown RBP2.89□□□□□ -1.95
SIR1YKR101W RPL2BP0CX46 254 aaKnown RBP2.89□□□□□ -1.95
SIR1YKR101W NMT1P14743 455 aa2.89□□□□□ -1.95
SIR1YKR101W CGI121Q03705 181 aaKnown RBP2.89□□□□□ -1.95
SIR1YKR101W ATG40Q99325 256 aa2.89□□□□□ -1.95
SIR1YKR101W CSF1Q12150 2958 aa2.89□□□□□ -1.95
SIR1YKR101W BUB2P26448 306 aaPredicted RBP2.89□□□□□ -1.95
SIR1YKR101W YHR022CP38763 256 aa2.89□□□□□ -1.95
SIR1YKR101W DAD3P69850 94 aa2.89□□□□□ -1.95
SIR1YKR101W GAL83Q04739 417 aa2.89□□□□□ -1.95
SIR1YKR101W ATP20Q12233 115 aa2.89□□□□□ -1.95
SIR1YKR101W POL2P21951 2222 aaKnown RBP2.89□□□□□ -1.95
SIR1YKR101W DDI2P0CH63 225 aa2.88□□□□□ -1.95
SIR1YKR101W DDI3P0CH64 225 aa2.88□□□□□ -1.95
SIR1YKR101W UTR5P32630 166 aa2.88□□□□□ -1.95
SIR1YKR101W RPS1AP33442 255 aaKnown RBP2.88□□□□□ -1.95
SIR1YKR101W YBR032WP38223 100 aa2.88□□□□□ -1.95
SIR1YKR101W VMA22P38784 181 aa2.88□□□□□ -1.95
SIR1YKR101W SPC25P40014 221 aa2.88□□□□□ -1.95
SIR1YKR101W LSM3P57743 89 aaKnown RBP2.88□□□□□ -1.95
SIR1YKR101W CYT2Q00873 224 aa2.88□□□□□ -1.95
SIR1YKR101W ACC1Q00955 2233 aaKnown RBP2.88□□□□□ -1.95
SIR1YKR101W IRA1P18963 3092 aa2.87□□□□□ -1.95
SIR1YKR101W YLR236CA0A023PZG4 107 aa2.87□□□□□ -1.95
SIR1YKR101W RPL40AP0CH08 128 aaKnown RBP2.87□□□□□ -1.95
SIR1YKR101W RPL40BP0CH09 128 aaKnown RBP2.87□□□□□ -1.95
SIR1YKR101W IDP1P21954 428 aaKnown RBP2.87□□□□□ -1.95
SIR1YKR101W MOG1P47123 218 aa2.87□□□□□ -1.95
SIR1YKR101W RRP17Q04031 235 aaPredicted RBP2.87□□□□□ -1.95
SIR1YKR101W RPC19P28000 142 aaKnown RBP2.87□□□□□ -1.95
SIR1YKR101W PAM17P36147 197 aa2.87□□□□□ -1.95
SIR1YKR101W SVP26P38869 228 aa2.87□□□□□ -1.95
SIR1YKR101W AGE2P40529 298 aa2.87□□□□□ -1.95
SIR1YKR101W APQ12P40532 138 aa2.87□□□□□ -1.95
SIR1YKR101W XPT1P47165 209 aa2.87□□□□□ -1.95
SIR1YKR101W SBH1P52870 82 aa2.87□□□□□ -1.95
SIR1YKR101W YMR295CQ03559 197 aa2.87□□□□□ -1.95
SIR1YKR101W YMR253CQ04835 414 aa2.87□□□□□ -1.95
SIR1YKR101W NUM1Q00402 2748 aa2.86□□□□□ -1.95
SIR1YKR101W UBR1P19812 1950 aa2.86□□□□□ -1.95
SIR1YKR101W IRC23Q08416 157 aa2.86□□□□□ -1.95
SIR1YKR101W YOR214CQ12282 236 aa2.86□□□□□ -1.95
SIR1YKR101W GCN1P33892 2672 aaKnown RBP2.86□□□□□ -1.95
SIR1YKR101W PHO85P17157 305 aa2.85□□□□□ -1.95
SIR1YKR101W SFK1P35735 353 aa2.85□□□□□ -1.95
SIR1YKR101W CUP9P41817 306 aa2.85□□□□□ -1.95
SIR1YKR101W RGM1Q00453 211 aa2.85□□□□□ -1.95
SIR1YKR101W YDR476CQ03362 224 aa2.85□□□□□ -1.95
SIR1YKR101W SHH3Q04487 196 aa2.85□□□□□ -1.95
SIR1YKR101W RPL30P14120 105 aaKnown RBP2.84□□□□□ -1.95
SIR1YKR101W YBR220CP38318 560 aa2.84□□□□□ -1.95
SIR1YKR101W NSA2P40078 261 aaKnown RBP2.84□□□□□ -1.95
SIR1YKR101W RNH202Q05635 350 aa2.84□□□□□ -1.95
SIR1YKR101W FAS1P07149 2051 aaKnown RBP2.84□□□□□ -1.95
SIR1YKR101W HFA1P32874 2273 aa2.84□□□□□ -1.96
SIR1YKR101W YNL033WP53964 284 aa2.83□□□□□ -1.96
SIR1YKR101W FMN1Q03778 218 aa2.83□□□□□ -1.96
SIR1YKR101W STP22P25604 385 aa2.83□□□□□ -1.96
SIR1YKR101W IPI1P38803 334 aaPredicted RBP2.83□□□□□ -1.96
SIR1YKR101W POP3P53833 195 aaPredicted RBP2.83□□□□□ -1.96
SIR1YKR101W SPC24Q04477 213 aa2.83□□□□□ -1.96
SIR1YKR101W BRR2P32639 2163 aaKnown RBP2.82□□□□□ -1.96
SIR1YKR101W MRPL15P36523 253 aa2.82□□□□□ -1.96
SIR1YKR101W RRT1P38192 103 aa2.82□□□□□ -1.96
SIR1YKR101W AYR1P40471 297 aa2.82□□□□□ -1.96
SIR1YKR101W GLR1P41921 483 aaKnown RBP2.82□□□□□ -1.96
SIR1YKR101W KNH1P50112 268 aa2.82□□□□□ -1.96
SIR1YKR101W ERG25P53045 309 aa2.82□□□□□ -1.96
SIR1YKR101W MET31Q03081 177 aa2.82□□□□□ -1.96
SIR1YKR101W YBR209WP38311 105 aa2.81□□□□□ -1.96
SIR1YKR101W SOK1P40317 901 aa2.81□□□□□ -1.96
SIR1YKR101W DLS1P40366 167 aa2.81□□□□□ -1.96
SIR1YKR101W FIP1P45976 327 aa2.81□□□□□ -1.96
SIR1YKR101W YKR005CQ02203 525 aa2.81□□□□□ -1.96
SIR1YKR101W RAD28Q12021 506 aa2.81□□□□□ -1.96
SIR1YKR101W YIL046W-AQ3E7Z4 54 aa2.81□□□□□ -1.96
SIR1YKR101W YIL086CP40503 102 aa2.81□□□□□ -1.96
SIR1YKR101W PST2Q12335 198 aaKnown RBP2.81□□□□□ -1.96
SIR1YKR101W YHR086W-AQ3E746 53 aa2.81□□□□□ -1.96
SIR1YKR101W ATP5P09457 212 aa2.8□□□□□ -1.96
SIR1YKR101W PBI2P0CT04 75 aaKnown RBP2.8□□□□□ -1.96
SIR1YKR101W SEC11P15367 167 aa2.8□□□□□ -1.96
SIR1YKR101W SUI1P32911 108 aaKnown RBP2.8□□□□□ -1.96
SIR1YKR101W NUF2P33895 451 aa2.8□□□□□ -1.96
SIR1YKR101W PTC1P35182 281 aa2.8□□□□□ -1.96
SIR1YKR101W VPS28Q02767 242 aa2.8□□□□□ -1.96
SIR1YKR101W CUE4Q04201 117 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms