RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W GCV3P39726 170 aaPredicted RBP5.63□□□□□ -1.51
NMD5YJR132W YIL054WP40524 105 aa5.63□□□□□ -1.51
NMD5YJR132W RIM8P53179 542 aa5.63□□□□□ -1.51
NMD5YJR132W SUN4P53616 420 aa5.63□□□□□ -1.51
NMD5YJR132W YMR187CQ03236 431 aa5.63□□□□□ -1.51
NMD5YJR132W TSC3Q3E790 80 aa5.63□□□□□ -1.51
NMD5YJR132W YOR376W-AQ3E805 51 aa5.63□□□□□ -1.51
NMD5YJR132W ARF1P11076 181 aaKnown RBP5.63□□□□□ -1.51
NMD5YJR132W EMC5P40540 141 aa5.63□□□□□ -1.51
NMD5YJR132W YDR119W-AQ2V2P9 66 aa5.63□□□□□ -1.51
NMD5YJR132W CCH1P50077 2039 aa5.62□□□□□ -1.51
NMD5YJR132W Q0255P03881 472 aa5.62□□□□□ -1.51
NMD5YJR132W RPL32P38061 130 aaKnown RBP5.62□□□□□ -1.51
NMD5YJR132W PHS1P40857 217 aa5.62□□□□□ -1.51
NMD5YJR132W RPL16BP26785 198 aaKnown RBP5.62□□□□□ -1.51
NMD5YJR132W UBC13P52490 153 aa5.62□□□□□ -1.51
NMD5YJR132W YNL234WP53857 426 aa5.62□□□□□ -1.51
NMD5YJR132W SMD1Q02260 146 aaPredicted RBP5.62□□□□□ -1.51
NMD5YJR132W CNE1P27825 502 aa5.61□□□□□ -1.51
NMD5YJR132W SDS23P53172 527 aa5.61□□□□□ -1.51
NMD5YJR132W SPG4Q04438 115 aa5.61□□□□□ -1.51
NMD5YJR132W ATG40Q99325 256 aa5.61□□□□□ -1.51
NMD5YJR132W HTA2P04912 132 aa5.61□□□□□ -1.51
NMD5YJR132W PAU19P0CE85 124 aa5.61□□□□□ -1.51
NMD5YJR132W PAU21P0CE86 164 aa5.61□□□□□ -1.51
NMD5YJR132W PAU22P0CE87 164 aa5.61□□□□□ -1.51
NMD5YJR132W PAU3P25610 124 aa5.61□□□□□ -1.51
NMD5YJR132W PUB1P32588 453 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
NMD5YJR132W PEX17P40155 199 aa5.61□□□□□ -1.51
NMD5YJR132W JJJ3P47138 172 aa5.61□□□□□ -1.51
NMD5YJR132W EST3Q03096 181 aa5.61□□□□□ -1.51
NMD5YJR132W YBR255C-AQ3E776 120 aa5.61□□□□□ -1.51
NMD5YJR132W MSB2P32334 1306 aa5.6□□□□□ -1.51
NMD5YJR132W GGC1P38988 300 aa5.6□□□□□ -1.51
NMD5YJR132W YND1P40009 630 aa5.6□□□□□ -1.51
NMD5YJR132W NSA2P40078 261 aaKnown RBP5.6□□□□□ -1.51
NMD5YJR132W YNL046WP53956 172 aa5.6□□□□□ -1.51
NMD5YJR132W UBC4P15731 148 aa5.59□□□□□ -1.51
NMD5YJR132W CDC5P32562 705 aa5.59□□□□□ -1.51
NMD5YJR132W PHO88P38264 188 aaPredicted RBP5.59□□□□□ -1.51
NMD5YJR132W IRC22P40006 225 aa5.59□□□□□ -1.51
NMD5YJR132W YGL034CP53186 121 aa5.59□□□□□ -1.51
NMD5YJR132W ECM29P38737 1868 aa5.59□□□□□ -1.51
NMD5YJR132W APC1P53886 1748 aa5.59□□□□□ -1.51
NMD5YJR132W YHR139C-AO13536 103 aa5.59□□□□□ -1.51
NMD5YJR132W MAK32P23060 363 aa5.59□□□□□ -1.51
NMD5YJR132W AHT1P29589 182 aa5.59□□□□□ -1.51
NMD5YJR132W RPA12P32529 125 aaKnown RBP5.59□□□□□ -1.51
NMD5YJR132W YHL018WP38744 120 aaPredicted RBP5.59□□□□□ -1.51
NMD5YJR132W ADD37Q03233 198 aa5.59□□□□□ -1.51
NMD5YJR132W DAD1Q12248 94 aa5.59□□□□□ -1.51
NMD5YJR132W TDA4P47153 279 aa5.59□□□□□ -1.52
NMD5YJR132W YLR012CQ07927 99 aa5.58□□□□□ -1.52
NMD5YJR132W CTF8P38877 133 aa5.58□□□□□ -1.52
NMD5YJR132W KEG1P43614 200 aa5.58□□□□□ -1.52
NMD5YJR132W CUZ1P53899 274 aa5.58□□□□□ -1.52
NMD5YJR132W YIL102C-AQ2V2P5 75 aa5.58□□□□□ -1.52
NMD5YJR132W GPI18P38211 433 aa5.57□□□□□ -1.52
NMD5YJR132W WWM1P43582 211 aaKnown RBP5.57□□□□□ -1.52
NMD5YJR132W DSS4P32601 143 aa5.57□□□□□ -1.52
NMD5YJR132W YDL057WQ07379 328 aa5.57□□□□□ -1.52
NMD5YJR132W RRT15Q3E811 62 aa5.57□□□□□ -1.52
NMD5YJR132W HTL1Q9URQ5 78 aa5.57□□□□□ -1.52
NMD5YJR132W RPL22AP05749 121 aaKnown RBP5.57□□□□□ -1.52
NMD5YJR132W SVP26P38869 228 aa5.57□□□□□ -1.52
NMD5YJR132W FHN1P53279 174 aa5.57□□□□□ -1.52
NMD5YJR132W YLR363W-AQ3E747 85 aa5.57□□□□□ -1.52
NMD5YJR132W NAG1Q8TGN9 163 aa5.57□□□□□ -1.52
NMD5YJR132W HTA1P04911 132 aaKnown RBP5.56□□□□□ -1.52
NMD5YJR132W MIC10Q96VH5 97 aa5.56□□□□□ -1.52
NMD5YJR132W FKS3Q04952 1785 aa5.56□□□□□ -1.52
NMD5YJR132W ASP1P38986 381 aaPredicted RBP5.56□□□□□ -1.52
NMD5YJR132W YDL211CQ12121 372 aa5.56□□□□□ -1.52
NMD5YJR132W SUT2Q12286 268 aa5.56□□□□□ -1.52
NMD5YJR132W YGL088WP53151 121 aa5.55□□□□□ -1.52
NMD5YJR132W YCL021W-AQ96VH3 125 aa5.55□□□□□ -1.52
NMD5YJR132W YOL162WP0CF19 215 aa5.55□□□□□ -1.52
NMD5YJR132W RPL40AP0CH08 128 aaKnown RBP5.55□□□□□ -1.52
NMD5YJR132W RPL40BP0CH09 128 aaKnown RBP5.55□□□□□ -1.52
NMD5YJR132W YBR292CP38357 123 aa5.55□□□□□ -1.52
NMD5YJR132W MTR3P48240 250 aaPredicted RBP5.55□□□□□ -1.52
NMD5YJR132W BNS1P50084 137 aa5.55□□□□□ -1.52
NMD5YJR132W MPC1P53157 130 aaKnown RBP5.55□□□□□ -1.52
NMD5YJR132W YGR050CP53231 118 aa5.55□□□□□ -1.52
NMD5YJR132W LDB16P25587 256 aa5.54□□□□□ -1.52
NMD5YJR132W IRC25Q07951 179 aa5.54□□□□□ -1.52
NMD5YJR132W DFM1Q12743 341 aaKnown RBP5.54□□□□□ -1.52
NMD5YJR132W YCR099CP25657 155 aa5.54□□□□□ -1.52
NMD5YJR132W CSE2P33308 149 aa5.54□□□□□ -1.52
NMD5YJR132W NRG2P38082 220 aa5.54□□□□□ -1.52
NMD5YJR132W TIM17P39515 158 aa5.54□□□□□ -1.52
NMD5YJR132W NDD1Q08887 554 aa5.54□□□□□ -1.52
NMD5YJR132W YMR175W-AQ3E766 64 aa5.54□□□□□ -1.52
NMD5YJR132W RPB7P34087 171 aa5.54□□□□□ -1.52
NMD5YJR132W PIR5P46999 287 aa5.54□□□□□ -1.52
NMD5YJR132W YGL193CP53097 103 aa5.54□□□□□ -1.52
NMD5YJR132W PAU16P35994 123 aa5.53□□□□□ -1.52
NMD5YJR132W YLR112WQ12130 139 aa5.53□□□□□ -1.52
NMD5YJR132W SLH1P53327 1967 aaKnown RBP5.53□□□□□ -1.52
NMD5YJR132W RPL16AP26784 199 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 162.7 ms