RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	ODC1	Q03028	310 aa		0.86	□□□□□ -2.27
SIP4	YJL089W	MRPS17	Q03246	237 aa	Predicted RBP	0.86	□□□□□ -2.27
SIP4	YJL089W	POS5	Q06892	414 aa		0.86	□□□□□ -2.27
SIP4	YJL089W	ENV7	Q12003	364 aa		0.86	□□□□□ -2.27
SIP4	YJL089W	PRR2	Q12310	699 aa		0.86	□□□□□ -2.27
SIP4	YJL089W	YGR240C-A	Q3E786	66 aa		0.86	□□□□□ -2.27
SIP4	YJL089W	COA2	Q3E823	68 aa		0.86	□□□□□ -2.27
SIP4	YJL089W	MRS1	P07266	363 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	ACB1	P31787	87 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	TIR2	P33890	251 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	YBL059W	P34224	193 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	ELF1	P36053	145 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	NRG2	P38082	220 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	SHG1	P38337	142 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	MIG3	P39943	394 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	SIT1	P39980	628 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	YIL077C	P40508	320 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	SMD3	P43321	101 aa	Known RBP	0.85	□□□□□ -2.27
SIP4	YJL089W	SPC1	P46965	94 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	HAM1	P47119	197 aa	Known RBP	0.85	□□□□□ -2.27
SIP4	YJL089W	RIB4	P50861	169 aa	Predicted RBP	0.85	□□□□□ -2.27
SIP4	YJL089W	YGL185C	P53100	379 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
SIP4	YJL089W	ATG33	Q06485	197 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	RDS3	Q06835	107 aa	Predicted RBP	0.85	□□□□□ -2.27
SIP4	YJL089W	YDL242W	Q07746	117 aa		0.85	□□□□□ -2.27
SIP4	YJL089W	POC4	Q12245	148 aa	Predicted RBP	0.85	□□□□□ -2.27
SIP4	YJL089W	YPR010C-A	A5Z2X5	72 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	HTB2	P02294	131 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	VAR1	P02381	398 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.27	not detected
SIP4	YJL089W	RPL12A	P0CX53	165 aa	Known RBP	0.84	□□□□□ -2.27
SIP4	YJL089W	RPL12B	P0CX54	165 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	MAG1	P22134	296 aa	Known RBP	0.84	□□□□□ -2.27
SIP4	YJL089W	AHT1	P29589	182 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	PPQ1	P32945	549 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	AME1	P38313	324 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YHR022C	P38763	256 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	ASP1	P38986	381 aa	Predicted RBP	0.84	□□□□□ -2.27
SIP4	YJL089W	MST28	P39552	234 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	SNU13	P39990	126 aa	Known RBP	0.84	□□□□□ -2.27
SIP4	YJL089W	SPC25	P40014	221 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	GLE2	P40066	365 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YER135C	P40082	130 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	PRE5	P40302	234 aa	Known RBP	0.84	□□□□□ -2.27
SIP4	YJL089W	ATG27	P46989	271 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YDL183C	P48569	320 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	MST27	P53176	234 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	MRPL50	P53724	139 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YDR366C	P87287	132 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	TMA23	Q03525	211 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	ATC1	Q04005	294 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	UPS3	Q04006	179 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	RRT7	Q07829	113 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YLR042C	Q07990	161 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YOL160W	Q08321	113 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	FIT2	Q08906	153 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	FCF2	Q12035	217 aa	Predicted RBP	0.84	□□□□□ -2.27
SIP4	YJL089W	POM34	Q12445	299 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	PRM7	Q12459	698 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YOR011W-A	Q3E807	68 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	YLR342W-A	Q3E810	57 aa		0.84	□□□□□ -2.27
SIP4	YJL089W	SAL1	D6W196	494 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	UBI4	P0CG63	381 aa	Known RBP	0.84	□□□□□ -2.28
SIP4	YJL089W	RPB3	P16370	318 aa	Known RBP	0.84	□□□□□ -2.28
SIP4	YJL089W	CKS1	P20486	150 aa	Known RBP	0.84	□□□□□ -2.28
SIP4	YJL089W	DER1	P38307	211 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	YHR173C	P38864	112 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	YNL200C	P40165	246 aa	Known RBP	0.84	□□□□□ -2.28
SIP4	YJL089W	CYB5	P40312	120 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	VHS2	P40463	436 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	RPR2	P40571	144 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	LCB3	P47013	409 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	BRP1	P53194	125 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	YCL001W-A	P87012	153 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	YMR253C	Q04835	414 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	COA4	Q05809	96 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	ANT1	Q06497	328 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	ERV2	Q12284	196 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	YPL229W	Q99395	206 aa		0.84	□□□□□ -2.28
SIP4	YJL089W	YMR316C-A	I2HB70	103 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	RPS22A	P0C0W1	130 aa	Known RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	RNA15	P25299	296 aa	Predicted RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	TIP1	P27654	210 aa	Predicted RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	RPS0A	P32905	252 aa	Known RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	MRPL4	P36517	319 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	MBB1	P39534	108 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	GCV3	P39726	170 aa	Predicted RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	IRC22	P40006	225 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	KEG1	P43614	200 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	ERI1	P62651	68 aa	Known RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	YMR007W	Q03675	126 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	AVO2	Q04749	426 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	CTR3	Q06686	241 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	USV1	Q12132	391 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	CRC1	Q12289	327 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	YLR302C	O13544	120 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	RPL31B	P0C2H9	113 aa	Known RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	SAR1	P20606	190 aa	Known RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	COQ3	P27680	312 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 97 ms