RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	HSP150	P32478	413 aa		0.44	□□□□□ -2.34
SCW11	YGL028C	YER181C	P40097	107 aa		0.44	□□□□□ -2.34
SCW11	YGL028C	NMA1	Q06178	401 aa	Known RBP	0.44	□□□□□ -2.34
SCW11	YGL028C	EFG1	Q3E705	233 aa	Known RBP	0.44	□□□□□ -2.34
SCW11	YGL028C	RIB3	Q99258	208 aa		0.44	□□□□□ -2.34
SCW11	YGL028C	SPA2	P23201	1466 aa	Known RBP	0.43	□□□□□ -2.34
SCW11	YGL028C	FMP49	A0A023PZB3	126 aa		0.43	□□□□□ -2.34
SCW11	YGL028C	YCR001W	P25347	104 aa		0.43	□□□□□ -2.34
SCW11	YGL028C	RME1	P32338	300 aa	Known RBP	0.43	□□□□□ -2.34
SCW11	YGL028C	HHY1	P39982	102 aa		0.43	□□□□□ -2.34
SCW11	YGL028C	MAK3	Q03503	176 aa		0.43	□□□□□ -2.34
SCW11	YGL028C	IRC19	Q07843	230 aa		0.43	□□□□□ -2.34
SCW11	YGL028C	RFU1	Q08003	200 aa		0.43	□□□□□ -2.34
SCW11	YGL028C	DDR48	P18899	430 aa	Known RBP	0.42	□□□□□ -2.34
SCW11	YGL028C	PHO13	P19881	312 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	ECM31	P38122	312 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	DIE2	P50076	525 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	YGL193C	P53097	103 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	RCF2	P53721	224 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	TLG1	Q03322	224 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	FMN1	Q03778	218 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	SEN15	Q04675	128 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	YPD1	Q07688	167 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	VAM10	Q08474	114 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	SCS22	Q6Q595	175 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	PEX34	P25584	144 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	DER1	P38307	211 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	IPT1	P38954	527 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	YJL218W	P40892	196 aa	Known RBP	0.42	□□□□□ -2.34
SCW11	YGL028C	YDR476C	Q03362	224 aa		0.42	□□□□□ -2.34
SCW11	YGL028C	HYP2	P23301	157 aa	Known RBP	0.41	□□□□□ -2.34
SCW11	YGL028C	MRPL24	P36525	258 aa	Predicted RBP	0.41	□□□□□ -2.34
SCW11	YGL028C	RPL33A	P05744	107 aa	Known RBP	0.4	□□□□□ -2.35
SCW11	YGL028C	RPS28B	P0C0X0	67 aa	Known RBP	0.4	□□□□□ -2.35
SCW11	YGL028C	YGL041W-A	P0C5N3	154 aa		0.4	□□□□□ -2.35
SCW11	YGL028C	PBI2	P0CT04	75 aa	Known RBP	0.4	□□□□□ -2.35
SCW11	YGL028C	BUB2	P26448	306 aa	Predicted RBP	0.4	□□□□□ -2.35
SCW11	YGL028C	HSL1	P34244	1518 aa		0.4	□□□□□ -2.35
SCW11	YGL028C	ROM2	P51862	1356 aa	Known RBP	0.4	□□□□□ -2.35
SCW11	YGL028C	YCL001W-A	P87012	153 aa		0.4	□□□□□ -2.35
SCW11	YGL028C	SMD2	Q06217	110 aa	Known RBP	0.4	□□□□□ -2.35
SCW11	YGL028C	GPI11	Q06636	219 aa		0.4	□□□□□ -2.35
SCW11	YGL028C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.4	□□□□□ -2.35
SCW11	YGL028C	COX5B	P00425	151 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	FIG1	P38224	298 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	GPI2	P46961	280 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	VMA10	P48836	114 aa	Known RBP	0.39	□□□□□ -2.35
SCW11	YGL028C	ATP19	P81451	68 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	SED1	Q01589	338 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	RRT7	Q07829	113 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	MHF1	Q3E835	90 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	YHR213W-B	Q8TGK1	99 aa		0.39	□□□□□ -2.35
SCW11	YGL028C	RPS22A	P0C0W1	130 aa	Known RBP	0.38	□□□□□ -2.35
SCW11	YGL028C	NHP6A	P11632	93 aa	Known RBP	0.38	□□□□□ -2.35
SCW11	YGL028C	YGR201C	P42936	225 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	YNL122C	P53921	115 aa	Predicted RBP	0.38	□□□□□ -2.35
SCW11	YGL028C	EST3	Q03096	181 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	YPR153W	Q06537	140 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.38	□□□□□ -2.35
SCW11	YGL028C	PET20	Q99373	253 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	HAP2	P06774	265 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	YGL014C-A	P0C5N1	53 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	HSP12	P22943	109 aa	Known RBP	0.38	□□□□□ -2.35
SCW11	YGL028C	MGR2	Q02889	113 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	YOR072W	Q08486	104 aa		0.38	□□□□□ -2.35
SCW11	YGL028C	FYV5	P25585	152 aa		0.37	□□□□□ -2.35
SCW11	YGL028C	IPI1	P38803	334 aa	Predicted RBP	0.37	□□□□□ -2.35
SCW11	YGL028C	MOG1	P47123	218 aa		0.37	□□□□□ -2.35
SCW11	YGL028C	URA2	P07259	2214 aa	Known RBP	0.37	□□□□□ -2.35
SCW11	YGL028C	RPS1B	P23248	255 aa	Known RBP	0.36	□□□□□ -2.35
SCW11	YGL028C	ARC19	P33204	171 aa	Known RBP	0.36	□□□□□ -2.35
SCW11	YGL028C	YHR140W	P38842	239 aa		0.36	□□□□□ -2.35
SCW11	YGL028C	YMR141C	P40211	102 aa		0.36	□□□□□ -2.35
SCW11	YGL028C	PKR1	Q03880	122 aa	Known RBP	0.36	□□□□□ -2.35
SCW11	YGL028C	YMR320W	Q04897	101 aa		0.36	□□□□□ -2.35
SCW11	YGL028C	PRM3	Q08931	133 aa		0.36	□□□□□ -2.35
SCW11	YGL028C	BLM10	P43583	2143 aa		0.36	□□□□□ -2.35
SCW11	YGL028C	QCR6	P00127	147 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	RPL40A	P0CH08	128 aa	Known RBP	0.35	□□□□□ -2.35
SCW11	YGL028C	RPL40B	P0CH09	128 aa	Known RBP	0.35	□□□□□ -2.35
SCW11	YGL028C	PET54	P10834	293 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	PHB1	P40961	287 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	YMR122C	Q03879	124 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	RAV2	Q03956	351 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	TY4B-J	P47024	1803 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	RPL43A	P0CX25	92 aa	Known RBP	0.35	□□□□□ -2.35
SCW11	YGL028C	RPL43B	P0CX26	92 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	UTP11	P34247	250 aa	Predicted RBP	0.35	□□□□□ -2.35
SCW11	YGL028C	MVB12	P42939	101 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	YNL019C	P53975	284 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	SOM1	Q05676	74 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	HUT1	Q12520	339 aa		0.35	□□□□□ -2.35
SCW11	YGL028C	NMT1	P14743	455 aa		0.34	□□□□□ -2.36
SCW11	YGL028C	RPS1A	P33442	255 aa	Known RBP	0.34	□□□□□ -2.36
SCW11	YGL028C	AIM4	P38305	123 aa	Predicted RBP	0.34	□□□□□ -2.36
SCW11	YGL028C	LSM1	P47017	172 aa	Known RBP	0.34	□□□□□ -2.36
SCW11	YGL028C	YPL067C	Q02754	198 aa		0.34	□□□□□ -2.36
SCW11	YGL028C	IRC21	Q04772	201 aa		0.34	□□□□□ -2.36
SCW11	YGL028C	YOR385W	Q08909	290 aa		0.34	□□□□□ -2.36
SCW11	YGL028C	KTI11	Q3E840	82 aa		0.34	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms