RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C YOR015WQ12169 119 aa1.5□□□□□ -2.17
SRD1YCR018C UBR2Q07963 1872 aa1.5□□□□□ -2.17
SRD1YCR018C BEM2P39960 2167 aaKnown RBP1.49□□□□□ -2.17
SRD1YCR018C FIG2P25653 1609 aa1.49□□□□□ -2.17
SRD1YCR018C RAD6P06104 172 aa1.49□□□□□ -2.17
SRD1YCR018C YCR023CP25351 611 aa1.49□□□□□ -2.17
SRD1YCR018C RME1P32338 300 aaKnown RBP1.49□□□□□ -2.17
SRD1YCR018C FES1P38260 290 aa1.49□□□□□ -2.17
SRD1YCR018C ALB1P47019 175 aaPredicted RBP1.49□□□□□ -2.17
SRD1YCR018C UBC7Q02159 165 aa1.49□□□□□ -2.17
SRD1YCR018C CWC27Q02770 301 aa1.49□□□□□ -2.17
SRD1YCR018C YDR476CQ03362 224 aa1.49□□□□□ -2.17
SRD1YCR018C UPS3Q04006 179 aa1.49□□□□□ -2.17
SRD1YCR018C YLR053CQ12026 108 aa1.49□□□□□ -2.17
SRD1YCR018C UTP10P42945 1769 aaKnown RBP1.49□□□□□ -2.17
SRD1YCR018C NUF2P33895 451 aa1.48□□□□□ -2.17
SRD1YCR018C CPR5P35176 225 aa1.48□□□□□ -2.17
SRD1YCR018C HPA3P39979 161 aa1.48□□□□□ -2.17
SRD1YCR018C GLR1P41921 483 aaKnown RBP1.48□□□□□ -2.17
SRD1YCR018C YAE1P47118 141 aaPredicted RBP1.48□□□□□ -2.17
SRD1YCR018C RRP17Q04031 235 aaPredicted RBP1.48□□□□□ -2.17
SRD1YCR018C TOM1Q03280 3268 aa1.47□□□□□ -2.17
SRD1YCR018C FLO1P32768 1537 aa1.47□□□□□ -2.17
SRD1YCR018C RPS28BP0C0X0 67 aaKnown RBP1.47□□□□□ -2.17
SRD1YCR018C RPB7P34087 171 aa1.47□□□□□ -2.17
SRD1YCR018C AME1P38313 324 aa1.47□□□□□ -2.17
SRD1YCR018C FYV4P38783 130 aaPredicted RBP1.47□□□□□ -2.17
SRD1YCR018C YGL235WP53071 178 aa1.47□□□□□ -2.17
SRD1YCR018C HSK3P69852 69 aa1.47□□□□□ -2.17
SRD1YCR018C THI74Q04083 370 aa1.47□□□□□ -2.17
SRD1YCR018C NKP2Q06162 153 aa1.47□□□□□ -2.17
SRD1YCR018C RDI1Q12434 202 aa1.47□□□□□ -2.17
SRD1YCR018C RPS28AQ3E7X9 67 aaPredicted RBP1.47□□□□□ -2.17
SRD1YCR018C FAS2P19097 1887 aaKnown RBP1.47□□□□□ -2.17
SRD1YCR018C CYR1P08678 2026 aaKnown RBP1.46□□□□□ -2.18
SRD1YCR018C STF2P16965 84 aa1.46□□□□□ -2.18
SRD1YCR018C CSH1P38287 376 aa1.46□□□□□ -2.18
SRD1YCR018C YHL042WP38729 150 aa1.46□□□□□ -2.18
SRD1YCR018C YNL200CP40165 246 aaKnown RBP1.46□□□□□ -2.18
SRD1YCR018C YGL101WP53144 215 aa1.46□□□□□ -2.18
SRD1YCR018C HRD1Q08109 551 aa1.46□□□□□ -2.18
SRD1YCR018C NSE4P43124 402 aa1.45□□□□□ -2.18
SRD1YCR018C DML1Q03652 475 aa1.45□□□□□ -2.18
SRD1YCR018C UPS1Q05776 175 aa1.45□□□□□ -2.18
SRD1YCR018C ATG41Q12048 136 aa1.45□□□□□ -2.18
SRD1YCR018C UBC6P33296 250 aaPredicted RBP1.44□□□□□ -2.18
SRD1YCR018C SOK1P40317 901 aa1.44□□□□□ -2.18
SRD1YCR018C HHT1P61830 136 aa1.44□□□□□ -2.18
SRD1YCR018C YHP1Q04116 353 aa1.44□□□□□ -2.18
SRD1YCR018C RIM9Q04734 239 aa1.44□□□□□ -2.18
SRD1YCR018C HKR1P41809 1802 aa1.44□□□□□ -2.18
SRD1YCR018C RAD50P12753 1312 aa1.43□□□□□ -2.18
SRD1YCR018C SEN2P16658 377 aa1.43□□□□□ -2.18
SRD1YCR018C MAK31P23059 88 aa1.43□□□□□ -2.18
SRD1YCR018C PTC1P35182 281 aa1.43□□□□□ -2.18
SRD1YCR018C YRA2P36036 203 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
SRD1YCR018C YEL073CP39974 107 aa1.43□□□□□ -2.18
SRD1YCR018C YEL028WP39989 153 aa1.43□□□□□ -2.18
SRD1YCR018C MOB1P40484 314 aa1.43□□□□□ -2.18
SRD1YCR018C SBH2P52871 88 aa1.43□□□□□ -2.18
SRD1YCR018C YMR252CQ04814 134 aa1.43□□□□□ -2.18
SRD1YCR018C YMR321CQ04898 105 aa1.43□□□□□ -2.18
SRD1YCR018C YLR046CQ12253 270 aa1.43□□□□□ -2.18
SRD1YCR018C PST2Q12335 198 aaKnown RBP1.43□□□□□ -2.18
SRD1YCR018C YMR030W-AQ3E760 96 aa1.43□□□□□ -2.18
SRD1YCR018C YOR381W-AQ3E804 55 aa1.43□□□□□ -2.18
SRD1YCR018C DER1P38307 211 aa1.42□□□□□ -2.18
SRD1YCR018C LSM3P57743 89 aaKnown RBP1.42□□□□□ -2.18
SRD1YCR018C MET31Q03081 177 aa1.42□□□□□ -2.18
SRD1YCR018C SMD2Q06217 110 aaKnown RBP1.42□□□□□ -2.18
SRD1YCR018C SYM1Q06563 197 aa1.42□□□□□ -2.18
SRD1YCR018C YDR524C-BQ3E6R4 66 aa1.42□□□□□ -2.18
SRD1YCR018C YLR422WQ06409 1932 aa1.42□□□□□ -2.18
SRD1YCR018C FAS1P07149 2051 aaKnown RBP1.41□□□□□ -2.18
SRD1YCR018C VPS13Q07878 3144 aa1.41□□□□□ -2.18
SRD1YCR018C DUR1,2P32528 1835 aaKnown RBP1.41□□□□□ -2.18
SRD1YCR018C UBI4P0CG63 381 aaKnown RBP1.41□□□□□ -2.18
SRD1YCR018C PBI2P0CT04 75 aaKnown RBP1.41□□□□□ -2.18
SRD1YCR018C YCL042WP25572 119 aa1.41□□□□□ -2.18
SRD1YCR018C BUB2P26448 306 aaPredicted RBP1.41□□□□□ -2.18
SRD1YCR018C YBL010CP32788 280 aa1.41□□□□□ -2.18
SRD1YCR018C ARC19P33204 171 aaKnown RBP1.41□□□□□ -2.18
SRD1YCR018C YEL008WP40001 126 aa1.41□□□□□ -2.18
SRD1YCR018C MPM1P40364 252 aa1.41□□□□□ -2.18
SRD1YCR018C YFL065CP43539 102 aa1.41□□□□□ -2.18
SRD1YCR018C LIP1Q03579 150 aa1.41□□□□□ -2.18
SRD1YCR018C YDR391CQ04170 232 aa1.41□□□□□ -2.18
SRD1YCR018C NSL1Q12143 216 aa1.41□□□□□ -2.18
SRD1YCR018C YDR034W-BQ6Q5X2 51 aa1.41□□□□□ -2.18
SRD1YCR018C VAR1P02381 398 aa1.4□□□□□ -2.19
SRD1YCR018C ATP5P09457 212 aa1.4□□□□□ -2.19
SRD1YCR018C PEX34P25584 144 aa1.4□□□□□ -2.19
SRD1YCR018C FIG1P38224 298 aa1.4□□□□□ -2.19
SRD1YCR018C CCS1P40202 249 aaKnown RBP1.4□□□□□ -2.19
SRD1YCR018C NQM1P53228 333 aaPredicted RBP1.4□□□□□ -2.19
SRD1YCR018C YML079WQ03629 201 aa1.4□□□□□ -2.19
SRD1YCR018C UIP4Q08926 304 aa1.4□□□□□ -2.19
SRD1YCR018C SRP102P36057 244 aaPredicted RBP1.39□□□□□ -2.19
SRD1YCR018C DLS1P40366 167 aa1.39□□□□□ -2.19
SRD1YCR018C PAC10P48363 199 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 287.4 ms