RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C MSH5Q12175 901 aa0.67□□□□□ -2.3
YAR009CYAR009C MRPS28P21771 286 aa0.67□□□□□ -2.3
YAR009CYAR009C RMR1P53060 241 aa0.67□□□□□ -2.3
YAR009CYAR009C DAD3P69850 94 aa0.67□□□□□ -2.3
YAR009CYAR009C MRPS8Q03799 155 aa0.67□□□□□ -2.3
YAR009CYAR009C YPR108W-AQ3E7B3 70 aa0.67□□□□□ -2.3
YAR009CYAR009C MSW1P04803 379 aa0.67□□□□□ -2.3
YAR009CYAR009C RPL33AP05744 107 aaKnown RBP0.67□□□□□ -2.3
YAR009CYAR009C TMA19P35691 167 aaKnown RBP0.67□□□□□ -2.3
YAR009CYAR009C YBR063CP38083 404 aa0.67□□□□□ -2.3
YAR009CYAR009C RPL33BP41056 107 aaKnown RBP0.67□□□□□ -2.3
YAR009CYAR009C SMD3P43321 101 aaKnown RBP0.67□□□□□ -2.3
YAR009CYAR009C PAM18Q07914 168 aa0.67□□□□□ -2.3
YAR009CYAR009C YLR053CQ12026 108 aa0.67□□□□□ -2.3
YAR009CYAR009C YPR013CQ12145 317 aa0.67□□□□□ -2.3
YAR009CYAR009C CDC8P00572 216 aa0.66□□□□□ -2.3
YAR009CYAR009C ARO7P32178 256 aa0.66□□□□□ -2.3
YAR009CYAR009C RPL37BP51402 88 aaKnown RBP0.66□□□□□ -2.3
YAR009CYAR009C MED4Q12343 284 aa0.66□□□□□ -2.3
YAR009CYAR009C HTL1Q9URQ5 78 aa0.66□□□□□ -2.3
YAR009CYAR009C RPL9AP05738 191 aaKnown RBP0.66□□□□□ -2.3
YAR009CYAR009C DOG1P38774 246 aa0.66□□□□□ -2.3
YAR009CYAR009C MTW1P39731 289 aa0.66□□□□□ -2.3
YAR009CYAR009C RPL9BP51401 191 aaKnown RBP0.66□□□□□ -2.3
YAR009CYAR009C BRP1P53194 125 aa0.66□□□□□ -2.3
YAR009CYAR009C CMD1P06787 147 aaKnown RBP0.66□□□□□ -2.3
YAR009CYAR009C CTR2P38865 189 aa0.66□□□□□ -2.3
YAR009CYAR009C YER121WP40076 114 aa0.66□□□□□ -2.3
YAR009CYAR009C ILM1P47155 203 aa0.66□□□□□ -2.3
YAR009CYAR009C ERV29P53337 310 aa0.66□□□□□ -2.3
YAR009CYAR009C LPP1Q04396 274 aa0.66□□□□□ -2.3
YAR009CYAR009C ATG31Q12421 196 aa0.66□□□□□ -2.3
YAR009CYAR009C YGL258W-AQ3E740 77 aa0.66□□□□□ -2.3
YAR009CYAR009C PET54P10834 293 aa0.65□□□□□ -2.3
YAR009CYAR009C YKL075CP36083 450 aa0.65□□□□□ -2.3
YAR009CYAR009C TRM5P38793 499 aa0.65□□□□□ -2.3
YAR009CYAR009C HAM1P47119 197 aaKnown RBP0.65□□□□□ -2.3
YAR009CYAR009C ARO8P53090 500 aaKnown RBP0.65□□□□□ -2.3
YAR009CYAR009C SRL4Q03085 281 aa0.65□□□□□ -2.3
YAR009CYAR009C GRX3Q03835 250 aa0.65□□□□□ -2.3
YAR009CYAR009C RRP17Q04031 235 aaPredicted RBP0.65□□□□□ -2.3
YAR009CYAR009C SYM1Q06563 197 aa0.65□□□□□ -2.3
YAR009CYAR009C YLR126CQ12288 251 aa0.65□□□□□ -2.3
YAR009CYAR009C YPR010C-AA5Z2X5 72 aa0.65□□□□□ -2.31
YAR009CYAR009C CSH1P38287 376 aa0.65□□□□□ -2.31
YAR009CYAR009C YBR285WP38354 144 aa0.65□□□□□ -2.31
YAR009CYAR009C RGI1P40043 161 aaPredicted RBP0.65□□□□□ -2.31
YAR009CYAR009C NUP49Q02199 472 aa0.65□□□□□ -2.31
YAR009CYAR009C YOR020W-AQ3E824 90 aa0.65□□□□□ -2.31
YAR009CYAR009C COX5BP00425 151 aa0.65□□□□□ -2.31
YAR009CYAR009C FCY2P17064 533 aa0.65□□□□□ -2.31
YAR009CYAR009C RFA3P26755 122 aaKnown RBP0.65□□□□□ -2.31
YAR009CYAR009C PAU2P32612 120 aa0.65□□□□□ -2.31
YAR009CYAR009C RPB7P34087 171 aa0.65□□□□□ -2.31
YAR009CYAR009C ERV15P38312 142 aa0.65□□□□□ -2.31
YAR009CYAR009C CAT5P41735 233 aa0.65□□□□□ -2.31
YAR009CYAR009C GCN20P43535 752 aaKnown RBP0.65□□□□□ -2.31
YAR009CYAR009C ERJ5P43613 295 aaPredicted RBP0.65□□□□□ -2.31
YAR009CYAR009C YJR056CP47115 236 aa0.65□□□□□ -2.31
YAR009CYAR009C MIC26P50087 233 aa0.65□□□□□ -2.31
YAR009CYAR009C GPI11Q06636 219 aa0.65□□□□□ -2.31
YAR009CYAR009C DOG2P38773 246 aa0.64□□□□□ -2.31
YAR009CYAR009C RPF1P38805 295 aaKnown RBP0.64□□□□□ -2.31
YAR009CYAR009C VTC1P40046 129 aaRIP-Chip data0.64□□□□□ -2.31not detected
YAR009CYAR009C FMC1P40491 155 aa0.64□□□□□ -2.31
YAR009CYAR009C YNL033WP53964 284 aa0.64□□□□□ -2.31
YAR009CYAR009C YNL019CP53975 284 aa0.64□□□□□ -2.31
YAR009CYAR009C YMR099CQ03161 297 aaKnown RBP0.64□□□□□ -2.31
YAR009CYAR009C YKE4P40544 346 aa0.64□□□□□ -2.31
YAR009CYAR009C ABF2Q02486 183 aa0.64□□□□□ -2.31
YAR009CYAR009C CSN9Q03981 162 aa0.64□□□□□ -2.31
YAR009CYAR009C DYN3Q04949 312 aa0.64□□□□□ -2.31
YAR009CYAR009C CDC7P06243 507 aa0.63□□□□□ -2.31
YAR009CYAR009C YHR213WP0CI67 198 aa0.63□□□□□ -2.31
YAR009CYAR009C RPL2AP0CX45 254 aaKnown RBP0.63□□□□□ -2.31
YAR009CYAR009C RPL2BP0CX46 254 aaKnown RBP0.63□□□□□ -2.31
YAR009CYAR009C YHR022CP38763 256 aa0.63□□□□□ -2.31
YAR009CYAR009C DSE2P38844 325 aa0.63□□□□□ -2.31
YAR009CYAR009C FLX1P40464 311 aa0.63□□□□□ -2.31
YAR009CYAR009C ALG13P53178 202 aa0.63□□□□□ -2.31
YAR009CYAR009C CYT2Q00873 224 aa0.63□□□□□ -2.31
YAR009CYAR009C SGF11Q03067 99 aa0.63□□□□□ -2.31
YAR009CYAR009C RPL35AP0CX84 120 aaKnown RBP0.63□□□□□ -2.31
YAR009CYAR009C RPL35BP0CX85 120 aaKnown RBP0.63□□□□□ -2.31
YAR009CYAR009C YCR016WP25617 290 aaKnown RBP0.63□□□□□ -2.31
YAR009CYAR009C YBR013CP38215 129 aa0.63□□□□□ -2.31
YAR009CYAR009C SPC1P46965 94 aa0.63□□□□□ -2.31
YAR009CYAR009C MCM22P47167 239 aa0.63□□□□□ -2.31
YAR009CYAR009C TTI2P47168 421 aa0.63□□□□□ -2.31
YAR009CYAR009C YML108WQ03759 105 aa0.63□□□□□ -2.31
YAR009CYAR009C DDI2P0CH63 225 aa0.63□□□□□ -2.31
YAR009CYAR009C DDI3P0CH64 225 aa0.63□□□□□ -2.31
YAR009CYAR009C ECM4P36156 370 aa0.63□□□□□ -2.31
YAR009CYAR009C ECM33P38248 429 aaKnown RBP0.63□□□□□ -2.31
YAR009CYAR009C YMD8Q03697 442 aa0.63□□□□□ -2.31
YAR009CYAR009C YPD1Q07688 167 aa0.63□□□□□ -2.31
YAR009CYAR009C DCN1Q12395 269 aa0.63□□□□□ -2.31
YAR009CYAR009C DLS1P40366 167 aa0.62□□□□□ -2.31
YAR009CYAR009C POR2P40478 281 aa0.62□□□□□ -2.31
YAR009CYAR009C SPC2Q04969 178 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms