RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 MSCO60682 206 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 ITGAVP06756 1048 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 KRT3P12035 628 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 KRT4P19013 534 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 EIF4BP23588 611 aaKnown RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 SSTR1P30872 391 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 TCF7P36402 384 aaPredicted RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 RFC5P40937 340 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 RAP1GAPP47736 663 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 CTCFP49711 727 aaPredicted RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 GDF10P55107 478 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 LACTBP83111 547 aaPredicted RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 SPARCL1Q14515 664 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 PWP2Q15269 919 aaKnown RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 HIF1AQ16665 826 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 LY6KQ17RY6 165 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 ZNF699Q32M78 642 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 FAM182AQ5T1J6 154 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 DENND1BQ6P3S1 775 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 C3orf62Q6ZUJ4 267 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 BRSK2Q8IWQ3 736 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 TMEM130Q8N3G9 435 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 EMC1Q8N766 993 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 AGAP11Q8TF27 550 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 N4BP2L2Q92802 583 aaPredicted RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 GRAMD1AQ96CP6 724 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 STAMBPL1Q96FJ0 436 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 MRPL4Q9BYD3 311 aaKnown RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 SYNCQ9H7C4 482 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 ETNK1Q9HBU6 452 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 PCSK1NQ9UHG2 260 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 ZNF112Q9UJU3 913 aa8.02□□□□□ -1.13
PPARGC1A-204ENST00000506055 MAFO75444 373 aaPredicted RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 FARP2O94887 1054 aaPredicted RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 GJB1P08034 283 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 CD48P09326 243 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 RPS12P25398 132 aaKnown RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 IL1R2P27930 398 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 MSH2P43246 934 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 AP3M2P53677 418 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 CDH8P55286 799 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 OTUD4Q01804 1114 aaKnown RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 LAMTOR4Q0VGL1 99 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 RIPK1Q13546 671 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 TFDP1Q14186 410 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 EFTUD2Q15029 972 aaKnown RBP eCLIP8.01□□□□□ -1.138e-9■■□□□ 12
PPARGC1A-204ENST00000506055 SETDB1Q15047 1291 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 TARBP2Q15633 366 aaKnown RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 SLC1A5Q15758 541 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 MSS51Q4VC12 460 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 PPP1R15BQ5SWA1 713 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 FNBP1LQ5T0N5 605 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 SYCP2LQ5T4T6 812 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 HHATQ5VTY9 493 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ANKRD22Q5VYY1 191 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 RNF43Q68DV7 783 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ZPBP2Q6X784 338 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 VSIG1Q86XK7 387 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 TRIM50Q86XT4 487 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 RHPN2Q8IUC4 686 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 UBR7Q8N806 425 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 KCTD6Q8NC69 237 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 DNERQ8NFT8 737 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 JOSD2Q8TAC2 188 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ACTL9Q8TC94 416 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 LRRC8CQ8TDW0 803 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 DENND1AQ8TEH3 1009 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 PYROXD1Q8WU10 500 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 RSAD2Q8WXG1 361 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ACO2Q99798 780 aaKnown RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 MAK16Q9BXY0 300 aaKnown RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ZNF518BQ9C0D4 1074 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 MYLK2Q9H1R3 596 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 UBN1Q9NPG3 1134 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ARHGEF3Q9NR81 526 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 POLIQ9UNA4 740 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 RGPD3A6NKT7 1758 aaPredicted RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 RGPD4Q7Z3J3 1758 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 IGKV6D-21A0A0A0MT36 114 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 WDR91A4D1P6 747 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 C3orf70A6NLC5 250 aaPredicted RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 GOLGA8RI6L899 631 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 NFKBIEO00221 500 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 OGTO15294 1046 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 PRPF4O43172 522 aaKnown RBP eCLIP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 LRCH4O75427 683 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ANP32DO95626 131 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 PRKCBP05771 671 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ICAM3P32942 547 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ASPAP45381 313 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 EFNA5P52803 228 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 GEMIN4P57678 1058 aaKnown RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 GPX6P59796 221 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 PSMC1P62191 440 aaKnown RBP8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 TAP1Q03518 808 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 MYO1EQ12965 1108 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 MAPK6Q16659 721 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 FAM160B1Q5W0V3 765 aa8.01□□□□□ -1.13
PPARGC1A-204ENST00000506055 ASRGL1Q7L266 308 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms