RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 GJD2Q9UKL4 321 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 F8VP50 259 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 H0YGN5 161 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 IGHA2P01877 340 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 GNAT1P11488 350 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 CAPN2P17655 700 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 PSMA2P25787 234 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 IRX5P78411 483 aaPredicted RBP20.9■□□□□ 0.94
CASC4-203ENST00000429162 BEX3Q00994 111 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 SREBF2Q12772 1141 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 CALCOCO2Q13137 446 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 PDCLQ13371 301 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 PTK6Q13882 451 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 ZNF268Q14587 947 aaPredicted RBP20.9■□□□□ 0.94
CASC4-203ENST00000429162 SNX17Q15036 470 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 CCNG2Q16589 344 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 FSCN1Q16658 493 aaKnown RBP20.9■□□□□ 0.94
CASC4-203ENST00000429162 XYLT1Q86Y38 959 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 IPO4Q8TEX9 1081 aaKnown RBP20.9■□□□□ 0.94
CASC4-203ENST00000429162 ATG4AQ8WYN0 398 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 SLITRK1Q96PX8 696 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 PIN4Q9Y237 131 aaKnown RBP20.9■□□□□ 0.94
CASC4-203ENST00000429162 ATP8A1Q9Y2Q0 1164 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 NFS1Q9Y697 457 aa20.9■□□□□ 0.94
CASC4-203ENST00000429162 DOCK3Q8IZD9 2030 aa20.89■□□□□ 0.94
CASC4-203ENST00000429162 HMGB1P1B2RPK0 211 aaPredicted RBP20.89■□□□□ 0.93
CASC4-203ENST00000429162 TREHO43280 583 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 RECQL4O94761 1208 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 MYZAPP0CAP1 466 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 AKR1A1P14550 325 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 PTPN7P35236 360 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 GABRB2P47870 512 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 ZBTB6Q15916 424 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 POLNQ7Z5Q5 900 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 ATL2Q8NHH9 583 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 ART4Q93070 314 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 RNF25Q96BH1 459 aaPredicted RBP20.89■□□□□ 0.93
CASC4-203ENST00000429162 ATP6V1G3Q96LB4 118 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 ZMAT2Q96NC0 199 aaKnown RBP20.89■□□□□ 0.93
CASC4-203ENST00000429162 MIS12Q9H081 205 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 WHRNQ9P202 907 aa20.89■□□□□ 0.93
CASC4-203ENST00000429162 ERBB2P04626 1255 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 ATF7P17544 494 aaPredicted RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 PMS2P54278 862 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 EIF3BP55884 814 aaKnown RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 ZNF844Q08AG5 666 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 LCLAT1Q6UWP7 414 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 NME8Q8N427 588 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 CCDC114Q96M63 670 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 TSPAN18Q96SJ8 248 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 NXF3Q9H4D5 531 aaKnown RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 TMBIM4Q9HC24 238 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 METTL5Q9NRN9 209 aaKnown RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 TUBGCP4Q9UGJ1 667 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 ASIC3Q9UHC3 531 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 UBQLN1Q9UMX0 589 aaKnown RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 R3HDM2Q9Y2K5 976 aaKnown RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 TCF4P15884 667 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 RFC1P35251 1148 aaPredicted RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 GPD2P43304 727 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 CRYBB1P53674 252 aaPredicted RBP20.88■□□□□ 0.93
CASC4-203ENST00000429162 C7orf31Q8N865 590 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 KLHL11Q9NVR0 708 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 TJP2Q9UDY2 1190 aa20.88■□□□□ 0.93
CASC4-203ENST00000429162 PDCD11Q14690 1871 aaKnown RBP20.87■□□□□ 0.93
CASC4-203ENST00000429162 ERICH4A6NGS2 130 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 KPNA6O60684 536 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 TJP3O95049 919 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 HOXC8P31273 242 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 PURAQ00577 322 aaKnown RBP20.87■□□□□ 0.93
CASC4-203ENST00000429162 SLMAPQ14BN4 828 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 ALKAL1Q6UXT8 129 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 LEKR1Q6ZMV7 388 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 SPOCD1Q6ZMY3 1216 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 JOSD2Q8TAC2 188 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 MCRS1Q96EZ8 462 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 SNF8Q96H20 258 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 HES2Q9Y543 173 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 SNX9Q9Y5X1 595 aa20.87■□□□□ 0.93
CASC4-203ENST00000429162 PI4K2BG5E9Z4 385 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 XPOTO43592 962 aaKnown RBP20.86■□□□□ 0.93
CASC4-203ENST00000429162 KRT7P08729 469 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 CRHR2Q13324 411 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 HADHQ16836 314 aaKnown RBP20.86■□□□□ 0.93
CASC4-203ENST00000429162 MFSD7Q6UXD7 560 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 DPH6Q7L8W6 267 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 OR2W6PQ8NHA6 318 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 TMEM40Q8WWA1 233 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 PABPC3Q9H361 631 aaKnown RBP20.86■□□□□ 0.93
CASC4-203ENST00000429162 TSPAN16Q9UKR8 245 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 DUSP11O75319 330 aaKnown RBP20.86■□□□□ 0.93
CASC4-203ENST00000429162 CD4P01730 458 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 ATF2P15336 505 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 ITIH2P19823 946 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 SKOR1P84550 965 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 ZNF200P98182 395 aaPredicted RBP20.86■□□□□ 0.93
CASC4-203ENST00000429162 CAV1Q03135 178 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 LMNB2Q03252 620 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 ATP13A4Q4VNC1 1196 aa20.86■□□□□ 0.93
CASC4-203ENST00000429162 C9orf57Q5W0N0 161 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms