RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 FBXO10Q9UK96 956 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 PCDHB2Q9Y5E7 798 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ATRNO75882 1429 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 MROH1Q8NDA8 1641 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 C2orf81A6NN90 581 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CCDC188H7C350 402 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 NCAM2O15394 837 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 MTSS1O43312 755 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TSPAN3O60637 253 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 GJB1P08034 283 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 RENBPP51606 427 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TBC1D1Q86TI0 1168 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF513Q8N8E2 541 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 IPMKQ8NFU5 416 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CYFIP2Q96F07 1278 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 AGAP3Q96P47 875 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 C1QTNF7Q9BXJ2 289 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 CYP3A43Q9HB55 503 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 EML4Q9HC35 981 aaKnown RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 AGPAT3Q9NRZ7 376 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 TTC7AQ9ULT0 858 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-203ENST00000409101 ZMYM2Q9UBW7 1377 aa5.25□□□□□ -1.57
SCN3A-203ENST00000409101 HEATR9A2RTY3 570 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 MEI4A8MW99 385 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 NCF2P19878 526 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RGS4P49798 205 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TROAPQ12815 778 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RCN2Q14257 317 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CAPRIN1Q14444 709 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PKN2Q16513 984 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 HIST2H2ACQ16777 129 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 HIST2H2AA3Q6FI13 130 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TRAPPC11Q7Z392 1133 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 DDX42Q86XP3 938 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PHACTR4Q8IZ21 702 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SUSD6Q92537 303 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SLC5A5Q92911 643 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SNF8Q96H20 258 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 LATS2Q9NRM7 1088 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 EPS15L1Q9UBC2 864 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PCDHB9Q9Y5E1 797 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PCDHAC2Q9Y5I4 1007 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 MOXD2PA6NHM9 499 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RRP9O43818 475 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 POLR1AO95602 1720 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 EPHB2P29323 1055 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PBLDP30039 288 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 MLH1P40692 756 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TKTL1P51854 596 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SOX10P56693 466 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PRKCZQ05513 592 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 FOXD4Q12950 439 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ART3Q13508 389 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PCBP1Q15365 356 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RAB30Q15771 203 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 KCNA10Q16322 511 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CRY2Q49AN0 593 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 KIAA1324Q6UXG2 1013 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PPP1R16AQ96I34 528 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ELOVL4Q9GZR5 314 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ROBO1Q9Y6N7 1651 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SPACA6W5XKT8 324 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TBC1D3BA6NDS4 549 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 GLUD1P00367 558 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CRYBB1P53674 252 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 GEMP55040 296 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PDIA2Q13087 525 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ZNF211Q13398 564 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TMEM86AQ8N2M4 240 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 C1orf131Q8NDD1 294 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CALML6Q8TD86 181 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 IL17RAQ96F46 866 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RSRC1Q96IZ7 334 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 VCX3AQ9NNX9 186 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CBX4O00257 560 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 FOXN1O15353 648 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 STX7O15400 261 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 DYRK3O43781 588 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ATP1A3P13637 1013 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 MZF1P28698 734 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 CD52P31358 61 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SLCO1A2P46721 670 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 SCNN1GP51170 649 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 HIRAP54198 1017 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TBX4P57082 545 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ETF1P62495 437 aaKnown RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 GRB10Q13322 594 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 UGT3A1Q6NUS8 523 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PSRC1Q6PGN9 363 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RD3Q7Z3Z2 195 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 USP38Q8NB14 1042 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 ATP11CQ8NB49 1132 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PTPRN2Q92932 1015 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 TMEM176AQ96HP8 235 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 PKNOX2Q96KN3 472 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RMDN2Q96LZ7 410 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 RIPOR3Q96MK2 946 aa5.24□□□□□ -1.57
SCN3A-203ENST00000409101 FMO2Q99518 471 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms