RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 CLMNQ96JQ2 1002 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 NMRK1Q9NWW6 199 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 APOBEC2Q9Y235 224 aaKnown RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 STK24Q9Y6E0 443 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 KBTBD13C9JR72 458 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 EIF3DO15371 548 aaKnown RBP eCLIP10.58□□□□□ -0.72
PALB2-201ENST00000261584 GGPS1O95749 300 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 HSPA4LO95757 839 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
PALB2-201ENST00000261584 MYL6P60660 151 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 TMEM62Q0P6H9 643 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 CEP120Q8N960 986 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 CNBD2Q96M20 576 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 RANBP17Q9H2T7 1088 aaKnown RBP10.58□□□□□ -0.72
PALB2-201ENST00000261584 WHRNQ9P202 907 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 IP6K2Q9UHH9 426 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 ANGPTL2Q9UKU9 493 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 SCINQ9Y6U3 715 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 MRC1P22897 1456 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 TM4SF1P30408 202 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 GLRBP48167 497 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 GTF2A2P52657 109 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 JAG1P78504 1218 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 MAPK6Q16659 721 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 CLEC16AQ2KHT3 1053 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 ANKRD22Q5VYY1 191 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 BTNL9Q6UXG8 535 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 PIGWQ7Z7B1 504 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 TMEM130Q8N3G9 435 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.58□□□□□ -0.72
PALB2-201ENST00000261584 HSD17B14Q9BPX1 270 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 ADA2Q9NZK5 511 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 NYAP2Q9P242 653 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 CNOT7Q9UIV1 285 aaKnown RBP10.58□□□□□ -0.72
PALB2-201ENST00000261584 MYH7P12883 1935 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 LYPLA1O75608 230 aaPredicted RBP10.58□□□□□ -0.72
PALB2-201ENST00000261584 PROSCO94903 275 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 PDGFRAP16234 1089 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 GNL1P36915 607 aaPredicted RBP10.58□□□□□ -0.72
PALB2-201ENST00000261584 SERPINB5P36952 375 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 HMGCS2P54868 508 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 MAP7Q14244 749 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 SLC10A5Q5PT55 438 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 TRIM50Q86XT4 487 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 GRAMD1AQ96CP6 724 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 MMP19Q99542 508 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 CYP39A1Q9NYL5 469 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 STXBP5LQ9Y2K9 1186 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 LAMA4Q16363 1823 aa10.58□□□□□ -0.72
PALB2-201ENST00000261584 PIK3CDO00329 1044 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 USP12O75317 370 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ATP5HO75947 161 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 GJB1P08034 283 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 JAM2P57087 298 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ROR1Q01973 937 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 PRKCEQ02156 737 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
PALB2-201ENST00000261584 TKFCQ3LXA3 575 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 DENND5BQ6ZUT9 1274 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 WDR75Q8IWA0 830 aaKnown RBP10.57□□□□□ -0.72
PALB2-201ENST00000261584 ST13P4Q8IZP2 240 aaPredicted RBP10.57□□□□□ -0.72
PALB2-201ENST00000261584 ICA1LQ8NDH6 482 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 PLEKHO2Q8TD55 490 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ATG4CQ96DT6 458 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 MARK4Q96L34 752 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ADAM7Q9H2U9 754 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 VAV3Q9UKW4 847 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 LZTS1Q9Y250 596 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 PCDHA10Q9Y5I2 948 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 EDIL3O43854 480 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 PDGFRBP09619 1106 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 PTPN4P29074 926 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 TYK2P29597 1187 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 DSG3P32926 999 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 AP2B1P63010 937 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 CAV1Q03135 178 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 USP4Q13107 963 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 HIC1Q14526 733 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 TAF5Q15542 800 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ZNF568Q3ZCX4 644 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 LPCAT4Q643R3 524 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 LRRC74BQ6ZQY2 392 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 OR5B17Q8NGF7 314 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 GCNAQ96QF7 691 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 NMUR2Q9GZQ4 415 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 DCLRE1BQ9H816 532 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 IL1RL2Q9HB29 575 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 PTPRHQ9HD43 1115 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 PCYOX1Q9UHG3 505 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 SMG5Q9UPR3 1016 aaKnown RBP10.57□□□□□ -0.72
PALB2-201ENST00000261584 ZNF142P52746 1687 aaPredicted RBP10.57□□□□□ -0.72
PALB2-201ENST00000261584 A6NJR5 290 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 TBX3O15119 743 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 DKC1O60832 514 aaKnown RBP eCLIP10.57□□□□□ -0.72
PALB2-201ENST00000261584 CD48P09326 243 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 ADORA2BP29275 332 aa10.57□□□□□ -0.72
PALB2-201ENST00000261584 CIITAP33076 1130 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms