RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W AVT2P39981 480 aa3.88□□□□□ -1.79
DPB2YPR175W MAK3Q03503 176 aa3.88□□□□□ -1.79
DPB2YPR175W MRPS8Q03799 155 aa3.88□□□□□ -1.79
DPB2YPR175W RAS2P01120 322 aaKnown RBP3.88□□□□□ -1.79
DPB2YPR175W BUB2P26448 306 aaPredicted RBP3.88□□□□□ -1.79
DPB2YPR175W IPI1P38803 334 aaPredicted RBP3.87□□□□□ -1.79
DPB2YPR175W ERJ5P43613 295 aaPredicted RBP3.87□□□□□ -1.79
DPB2YPR175W LSM3P57743 89 aaKnown RBP3.87□□□□□ -1.79
DPB2YPR175W YRF1-3P0CX14 1859 aa3.86□□□□□ -1.79
DPB2YPR175W YRF1-7P0CX15 1859 aa3.86□□□□□ -1.79
DPB2YPR175W YFR054CP43622 192 aa3.86□□□□□ -1.79
DPB2YPR175W YRF1-6P53819 1859 aa3.86□□□□□ -1.79
DPB2YPR175W TMA20P89886 181 aaPredicted RBP3.86□□□□□ -1.79
DPB2YPR175W PRM7Q12459 698 aa3.86□□□□□ -1.79
DPB2YPR175W SNF2P22082 1703 aa3.86□□□□□ -1.79
DPB2YPR175W SNC2P33328 115 aa3.86□□□□□ -1.79
DPB2YPR175W APQ12P40532 138 aa3.86□□□□□ -1.79
DPB2YPR175W RPL33BP41056 107 aaKnown RBP3.86□□□□□ -1.79
DPB2YPR175W YGR219WP53307 113 aa3.86□□□□□ -1.79
DPB2YPR175W VPS71Q03433 280 aa3.86□□□□□ -1.79
DPB2YPR175W ATP20Q12233 115 aa3.86□□□□□ -1.79
DPB2YPR175W RSF2P46974 1380 aa3.86□□□□□ -1.79
DPB2YPR175W UPS2P35200 230 aa3.85□□□□□ -1.79
DPB2YPR175W SOK1P40317 901 aa3.85□□□□□ -1.79
DPB2YPR175W YMR320WQ04897 101 aa3.85□□□□□ -1.79
DPB2YPR175W HRT1Q08273 121 aa3.85□□□□□ -1.79
DPB2YPR175W TIR3P40552 269 aa3.85□□□□□ -1.79
DPB2YPR175W GAL83Q04739 417 aa3.85□□□□□ -1.79
DPB2YPR175W RPL30P14120 105 aaKnown RBP3.84□□□□□ -1.79
DPB2YPR175W DIG2Q03373 323 aaKnown RBP3.84□□□□□ -1.79
DPB2YPR175W PEX34P25584 144 aa3.83□□□□□ -1.8
DPB2YPR175W NUF2P33895 451 aa3.83□□□□□ -1.8
DPB2YPR175W VMA22P38784 181 aa3.83□□□□□ -1.8
DPB2YPR175W RAD50P12753 1312 aa3.83□□□□□ -1.8
DPB2YPR175W FIP1P45976 327 aa3.83□□□□□ -1.8
DPB2YPR175W CIS3P47001 227 aa3.83□□□□□ -1.8
DPB2YPR175W SPC2Q04969 178 aa3.83□□□□□ -1.8
DPB2YPR175W PHO85P17157 305 aa3.82□□□□□ -1.8
DPB2YPR175W SCL1P21243 252 aaKnown RBP3.82□□□□□ -1.8
DPB2YPR175W IDP1P21954 428 aaKnown RBP3.82□□□□□ -1.8
DPB2YPR175W YET1P35723 206 aa3.82□□□□□ -1.8
DPB2YPR175W YOR062CP36025 268 aa3.82□□□□□ -1.8
DPB2YPR175W ERV15P38312 142 aa3.82□□□□□ -1.8
DPB2YPR175W PHB1P40961 287 aa3.82□□□□□ -1.8
DPB2YPR175W ADE6P38972 1358 aaKnown RBP3.82□□□□□ -1.8
DPB2YPR175W FZF1P32805 299 aa3.82□□□□□ -1.8
DPB2YPR175W CLB6P32943 380 aa3.82□□□□□ -1.8
DPB2YPR175W PHO88P38264 188 aaPredicted RBP3.82□□□□□ -1.8
DPB2YPR175W XPT1P47165 209 aa3.82□□□□□ -1.8
DPB2YPR175W APC1P53886 1748 aa3.81□□□□□ -1.8
DPB2YPR175W POP7P38291 140 aa3.81□□□□□ -1.8
DPB2YPR175W GLR1P41921 483 aaKnown RBP3.81□□□□□ -1.8
DPB2YPR175W FAS1P07149 2051 aaKnown RBP3.81□□□□□ -1.8
DPB2YPR175W PEX4P29340 183 aa3.8□□□□□ -1.8
DPB2YPR175W SHE2P36068 246 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
DPB2YPR175W CYC2P38909 366 aa3.8□□□□□ -1.8
DPB2YPR175W SPC25P40014 221 aa3.8□□□□□ -1.8
DPB2YPR175W PKR1Q03880 122 aaKnown RBP3.8□□□□□ -1.8
DPB2YPR175W YOR214CQ12282 236 aa3.8□□□□□ -1.8
DPB2YPR175W YBR220CP38318 560 aa3.8□□□□□ -1.8
DPB2YPR175W DLS1P40366 167 aa3.8□□□□□ -1.8
DPB2YPR175W MIX17Q03667 156 aa3.8□□□□□ -1.8
DPB2YPR175W RIB3Q99258 208 aa3.8□□□□□ -1.8
DPB2YPR175W RIM15P43565 1770 aa3.8□□□□□ -1.8
DPB2YPR175W NSP1P14907 823 aaKnown RBP3.79□□□□□ -1.8
DPB2YPR175W STP22P25604 385 aa3.79□□□□□ -1.8
DPB2YPR175W PAM17P36147 197 aa3.79□□□□□ -1.8
DPB2YPR175W YDR476CQ03362 224 aa3.79□□□□□ -1.8
DPB2YPR175W YOR289WQ12012 251 aaPredicted RBP3.79□□□□□ -1.8
DPB2YPR175W AGE2P40529 298 aa3.79□□□□□ -1.8
DPB2YPR175W YMR253CQ04835 414 aa3.79□□□□□ -1.8
DPB2YPR175W RNH202Q05635 350 aa3.79□□□□□ -1.8
DPB2YPR175W EMC6Q12431 108 aa3.79□□□□□ -1.8
DPB2YPR175W YGR201CP42936 225 aa3.78□□□□□ -1.8
DPB2YPR175W SBH1P52870 82 aa3.78□□□□□ -1.8
DPB2YPR175W PST2Q12335 198 aaKnown RBP3.78□□□□□ -1.8
DPB2YPR175W ATG40Q99325 256 aa3.78□□□□□ -1.8
DPB2YPR175W YLR236CA0A023PZG4 107 aa3.77□□□□□ -1.81
DPB2YPR175W YJR015WP47090 510 aa3.77□□□□□ -1.81
DPB2YPR175W IRC23Q08416 157 aa3.77□□□□□ -1.81
DPB2YPR175W ATP5P09457 212 aa3.77□□□□□ -1.81
DPB2YPR175W DDI2P0CH63 225 aa3.77□□□□□ -1.81
DPB2YPR175W DDI3P0CH64 225 aa3.77□□□□□ -1.81
DPB2YPR175W RRT1P38192 103 aa3.77□□□□□ -1.81
DPB2YPR175W NSA2P40078 261 aaKnown RBP3.76□□□□□ -1.81
DPB2YPR175W YNL217WP40152 326 aa3.76□□□□□ -1.81
DPB2YPR175W APS3P47064 194 aa3.76□□□□□ -1.81
DPB2YPR175W CUP9P41817 306 aa3.75□□□□□ -1.81
DPB2YPR175W YNL033WP53964 284 aa3.75□□□□□ -1.81
DPB2YPR175W SHH3Q04487 196 aa3.75□□□□□ -1.81
DPB2YPR175W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
DPB2YPR175W PBI2P0CT04 75 aaKnown RBP3.75□□□□□ -1.81
DPB2YPR175W UTP11P34247 250 aaPredicted RBP3.75□□□□□ -1.81
DPB2YPR175W YEL028WP39989 153 aa3.75□□□□□ -1.81
DPB2YPR175W YKR005CQ02203 525 aa3.75□□□□□ -1.81
DPB2YPR175W YMR295CQ03559 197 aa3.75□□□□□ -1.81
DPB2YPR175W YLR419WQ06698 1435 aaKnown RBP3.74□□□□□ -1.81
DPB2YPR175W DUR1,2P32528 1835 aaKnown RBP3.74□□□□□ -1.81
DPB2YPR175W TRS20P38334 175 aa3.74□□□□□ -1.81
DPB2YPR175W GAA1P39012 614 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms