RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C FPR2P32472 135 aa5.94□□□□□ -1.46
PUP1YOR157C YKL162CP36052 402 aa5.94□□□□□ -1.46
PUP1YOR157C YIL077CP40508 320 aa5.94□□□□□ -1.46
PUP1YOR157C CDC40P40968 455 aaPredicted RBP5.94□□□□□ -1.46
PUP1YOR157C MGR3Q04472 501 aa5.94□□□□□ -1.46
PUP1YOR157C SCM3Q12334 223 aa5.94□□□□□ -1.46
PUP1YOR157C RPL11BQ3E757 174 aaPredicted RBP5.94□□□□□ -1.46
PUP1YOR157C DFR1P07807 211 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
PUP1YOR157C AIM25P47140 327 aa5.93□□□□□ -1.46
PUP1YOR157C ODC1Q03028 310 aa5.93□□□□□ -1.46
PUP1YOR157C MSH5Q12175 901 aa5.93□□□□□ -1.46
PUP1YOR157C SEC22P22214 214 aa5.92□□□□□ -1.46
PUP1YOR157C MRPL4P36517 319 aa5.92□□□□□ -1.46
PUP1YOR157C ATG27P46989 271 aa5.92□□□□□ -1.46
PUP1YOR157C YCT1Q12235 531 aa5.92□□□□□ -1.46
PUP1YOR157C ERV2Q12284 196 aa5.92□□□□□ -1.46
PUP1YOR157C HTZ1Q12692 134 aaKnown RBP5.92□□□□□ -1.46
PUP1YOR157C YOL085CQ99345 113 aa5.92□□□□□ -1.46
PUP1YOR157C TIR2P33890 251 aa5.91□□□□□ -1.46
PUP1YOR157C SHB17P36136 271 aaKnown RBP5.91□□□□□ -1.46
PUP1YOR157C YHR022CP38763 256 aa5.91□□□□□ -1.46
PUP1YOR157C RBL2P48606 106 aaKnown RBP5.91□□□□□ -1.46
PUP1YOR157C SMX3P54999 86 aaPredicted RBP5.91□□□□□ -1.46
PUP1YOR157C POM34Q12445 299 aa5.91□□□□□ -1.46
PUP1YOR157C TMA17Q12513 150 aa5.91□□□□□ -1.46
PUP1YOR157C RPS25BP0C0T4 108 aaKnown RBP5.9□□□□□ -1.46
PUP1YOR157C PPQ1P32945 549 aa5.9□□□□□ -1.46
PUP1YOR157C SFT2P38166 215 aa5.9□□□□□ -1.46
PUP1YOR157C LSM2P38203 95 aaKnown RBP5.9□□□□□ -1.46
PUP1YOR157C SIT1P39980 628 aa5.9□□□□□ -1.46
PUP1YOR157C PBA1Q05778 276 aa5.9□□□□□ -1.46
PUP1YOR157C NGL1Q08213 363 aaKnown RBP5.9□□□□□ -1.46
PUP1YOR157C YPL264CQ08980 353 aa5.9□□□□□ -1.46
PUP1YOR157C CCW12Q12127 133 aa5.9□□□□□ -1.46
PUP1YOR157C RPS25AQ3E792 108 aaPredicted RBP5.9□□□□□ -1.46
PUP1YOR157C MRPL3P36516 390 aa5.89□□□□□ -1.47
PUP1YOR157C MBA1P38300 278 aa5.89□□□□□ -1.47
PUP1YOR157C NIF3P53081 288 aa5.89□□□□□ -1.47
PUP1YOR157C ORM1P53224 222 aa5.89□□□□□ -1.47
PUP1YOR157C PKP2P53170 491 aa5.88□□□□□ -1.47
PUP1YOR157C AIM45Q12480 344 aaKnown RBP5.88□□□□□ -1.47
PUP1YOR157C COA2Q3E823 68 aa5.88□□□□□ -1.47
PUP1YOR157C YLL066W-BQ8TGJ7 56 aa5.88□□□□□ -1.47
PUP1YOR157C YPL229WQ99395 206 aa5.88□□□□□ -1.47
PUP1YOR157C TPI1P00942 248 aaKnown RBP5.87□□□□□ -1.47
PUP1YOR157C JLP2P40206 208 aa5.87□□□□□ -1.47
PUP1YOR157C SPC1P46965 94 aa5.87□□□□□ -1.47
PUP1YOR157C YPS5P53057 165 aa5.87□□□□□ -1.47
PUP1YOR157C ATP23P53722 227 aa5.87□□□□□ -1.47
PUP1YOR157C SNO1Q03144 224 aa5.87□□□□□ -1.47
PUP1YOR157C COA4Q05809 96 aa5.87□□□□□ -1.47
PUP1YOR157C YBR126W-AQ8TGU7 68 aa5.87□□□□□ -1.47
PUP1YOR157C PDR17P53844 350 aa5.86□□□□□ -1.47
PUP1YOR157C YIF1P53845 314 aaKnown RBP5.86□□□□□ -1.47
PUP1YOR157C ENV7Q12003 364 aa5.86□□□□□ -1.47
PUP1YOR157C CYC1P00044 109 aaPredicted RBP5.85□□□□□ -1.47
PUP1YOR157C ELF1P36053 145 aa5.85□□□□□ -1.47
PUP1YOR157C YMR090WQ04304 227 aaKnown RBP5.85□□□□□ -1.47
PUP1YOR157C RDI1Q12434 202 aa5.85□□□□□ -1.47
PUP1YOR157C YCR016WP25617 290 aaKnown RBP5.84□□□□□ -1.47
PUP1YOR157C DSK2P48510 373 aa5.84□□□□□ -1.47
PUP1YOR157C MIC27P50945 234 aa5.84□□□□□ -1.47
PUP1YOR157C YPR145C-AQ2V2P0 78 aa5.84□□□□□ -1.47
PUP1YOR157C EMP24P32803 203 aaKnown RBP5.83□□□□□ -1.48
PUP1YOR157C TMA20P89886 181 aaPredicted RBP5.83□□□□□ -1.48
PUP1YOR157C TMA23Q03525 211 aa5.83□□□□□ -1.48
PUP1YOR157C SHH3Q04487 196 aa5.83□□□□□ -1.48
PUP1YOR157C YGR240C-AQ3E786 66 aa5.83□□□□□ -1.48
PUP1YOR157C DDI2P0CH63 225 aa5.82□□□□□ -1.48
PUP1YOR157C DDI3P0CH64 225 aa5.82□□□□□ -1.48
PUP1YOR157C PET100P38958 111 aa5.82□□□□□ -1.48
PUP1YOR157C ASP1P38986 381 aaPredicted RBP5.82□□□□□ -1.48
PUP1YOR157C MBB1P39534 108 aa5.82□□□□□ -1.48
PUP1YOR157C SER2P42941 309 aa5.82□□□□□ -1.48
PUP1YOR157C ARR3Q06598 404 aa5.82□□□□□ -1.48
PUP1YOR157C IES3Q12345 250 aa5.82□□□□□ -1.48
PUP1YOR157C SUA5P32579 426 aa5.81□□□□□ -1.48
PUP1YOR157C YJL028WP47062 111 aa5.81□□□□□ -1.48
PUP1YOR157C YNR071CP53757 342 aa5.81□□□□□ -1.48
PUP1YOR157C BOR1P53838 576 aa5.81□□□□□ -1.48
PUP1YOR157C DFM1Q12743 341 aaKnown RBP5.81□□□□□ -1.48
PUP1YOR157C RTC6O14464 93 aa5.8□□□□□ -1.48
PUP1YOR157C YDR034C-AP0C289 58 aa5.8□□□□□ -1.48
PUP1YOR157C YGR269WP40326 108 aa5.8□□□□□ -1.48
PUP1YOR157C YJR096WP47137 282 aa5.8□□□□□ -1.48
PUP1YOR157C NKP1Q12493 238 aa5.8□□□□□ -1.48
PUP1YOR157C RRT15Q3E811 62 aa5.8□□□□□ -1.48
PUP1YOR157C YLR302CO13544 120 aa5.79□□□□□ -1.48
PUP1YOR157C Q0255P03881 472 aa5.79□□□□□ -1.48
PUP1YOR157C AGA1P32323 725 aa5.79□□□□□ -1.48
PUP1YOR157C LSM7P53905 115 aaKnown RBP5.79□□□□□ -1.48
PUP1YOR157C PHO92Q06390 306 aa5.79□□□□□ -1.48
PUP1YOR157C TRM13Q12383 476 aa5.79□□□□□ -1.48
PUP1YOR157C RPB3P16370 318 aaKnown RBP5.78□□□□□ -1.48
PUP1YOR157C RNA15P25299 296 aaPredicted RBP5.78□□□□□ -1.48
PUP1YOR157C RRT13P40042 185 aa5.78□□□□□ -1.48
PUP1YOR157C SWM2P40342 146 aa5.78□□□□□ -1.48
PUP1YOR157C CTR3Q06686 241 aa5.78□□□□□ -1.48
PUP1YOR157C TFB5Q3E7C1 72 aaPredicted RBP5.78□□□□□ -1.48
PUP1YOR157C VAR1P02381 398 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms