RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YDR115WQ04598 105 aa3.1□□□□□ -1.91
PUB1YNL016W PBA1Q05778 276 aa3.1□□□□□ -1.91
PUB1YNL016W YLR179CQ06252 201 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W YPL162CQ12042 273 aa3.1□□□□□ -1.91
PUB1YNL016W DFM1Q12743 341 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W SLO1Q3E784 85 aa3.1□□□□□ -1.91
PUB1YNL016W YOR020W-AQ3E824 90 aa3.1□□□□□ -1.91
PUB1YNL016W FLO9P39712 1322 aa3.1□□□□□ -1.91
PUB1YNL016W ADH1P00330 348 aaKnown RBP3.09□□□□□ -1.92
PUB1YNL016W KIN28P06242 306 aa3.09□□□□□ -1.92
PUB1YNL016W CKS1P20486 150 aaKnown RBP3.09□□□□□ -1.92
PUB1YNL016W MRP49P32388 137 aa3.09□□□□□ -1.92
PUB1YNL016W UGX2P32772 223 aa3.09□□□□□ -1.92
PUB1YNL016W TEM1P38987 245 aa3.09□□□□□ -1.92
PUB1YNL016W RFC2P40348 353 aa3.09□□□□□ -1.92
PUB1YNL016W DLS1P40366 167 aa3.09□□□□□ -1.92
PUB1YNL016W RPE1P46969 238 aa3.09□□□□□ -1.92
PUB1YNL016W TDA4P47153 279 aa3.09□□□□□ -1.92
PUB1YNL016W XPT1P47165 209 aa3.09□□□□□ -1.92
PUB1YNL016W TTI2P47168 421 aa3.09□□□□□ -1.92
PUB1YNL016W YMR244WQ04018 355 aa3.09□□□□□ -1.92
PUB1YNL016W CNL1Q06333 122 aa3.09□□□□□ -1.92
PUB1YNL016W Q0255P03881 472 aa3.08□□□□□ -1.92
PUB1YNL016W YSF3P0C074 85 aaPredicted RBP3.08□□□□□ -1.92
PUB1YNL016W RPL30P14120 105 aaKnown RBP3.08□□□□□ -1.92
PUB1YNL016W RPS1BP23248 255 aaKnown RBP3.08□□□□□ -1.92
PUB1YNL016W ZRT3P34240 503 aa3.08□□□□□ -1.92
PUB1YNL016W YBR063CP38083 404 aa3.08□□□□□ -1.92
PUB1YNL016W CSH1P38287 376 aa3.08□□□□□ -1.92
PUB1YNL016W YPL073CP40323 161 aa3.08□□□□□ -1.92
PUB1YNL016W UFD1P53044 361 aa3.08□□□□□ -1.92
PUB1YNL016W CGI121Q03705 181 aaKnown RBP3.08□□□□□ -1.92
PUB1YNL016W PRP11Q07350 266 aaPredicted RBP3.08□□□□□ -1.92
PUB1YNL016W YPL247CQ12523 523 aa3.08□□□□□ -1.92
PUB1YNL016W YFR032C-BQ8TGU2 87 aa3.08□□□□□ -1.92
PUB1YNL016W BLM10P43583 2143 aa3.07□□□□□ -1.92
PUB1YNL016W GPA2P10823 449 aa3.07□□□□□ -1.92
PUB1YNL016W RPB3P16370 318 aaKnown RBP3.07□□□□□ -1.92
PUB1YNL016W ARO2P28777 376 aaKnown RBP3.07□□□□□ -1.92
PUB1YNL016W SHE2P36068 246 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
PUB1YNL016W MSA2P36157 363 aa3.07□□□□□ -1.92
PUB1YNL016W VMA7P39111 118 aa3.07□□□□□ -1.92
PUB1YNL016W PGD1P40356 397 aa3.07□□□□□ -1.92
PUB1YNL016W ERJ5P43613 295 aaPredicted RBP3.07□□□□□ -1.92
PUB1YNL016W CAB4P53332 305 aa3.07□□□□□ -1.92
PUB1YNL016W SLM2P53955 656 aa3.07□□□□□ -1.92
PUB1YNL016W NHP10Q03435 203 aa3.07□□□□□ -1.92
PUB1YNL016W TVP15Q03860 143 aa3.07□□□□□ -1.92
PUB1YNL016W ECM19Q06011 112 aa3.07□□□□□ -1.92
PUB1YNL016W YPL225WQ08971 146 aaKnown RBP3.07□□□□□ -1.92
PUB1YNL016W DGK1Q12382 290 aa3.07□□□□□ -1.92
PUB1YNL016W YMR030W-AQ3E760 96 aa3.07□□□□□ -1.92
PUB1YNL016W Q0297Q9ZZV8 51 aa3.07□□□□□ -1.92
PUB1YNL016W YFR010W-AP0C5N0 62 aa3.06□□□□□ -1.92
PUB1YNL016W YPR170W-BP0C5R9 85 aa3.06□□□□□ -1.92
PUB1YNL016W TFC1P32367 649 aa3.06□□□□□ -1.92
PUB1YNL016W YBL081WP38180 368 aaKnown RBP3.06□□□□□ -1.92
PUB1YNL016W ASP1P38986 381 aaPredicted RBP3.06□□□□□ -1.92
PUB1YNL016W IGD1P43598 195 aa3.06□□□□□ -1.92
PUB1YNL016W OST2P46964 130 aa3.06□□□□□ -1.92
PUB1YNL016W YGL118CP53132 145 aa3.06□□□□□ -1.92
PUB1YNL016W SCW4P53334 386 aaKnown RBP3.06□□□□□ -1.92
PUB1YNL016W DIG2Q03373 323 aaKnown RBP3.06□□□□□ -1.92
PUB1YNL016W MCP1Q12106 302 aa3.06□□□□□ -1.92
PUB1YNL016W MDN1Q12019 4910 aaKnown RBP3.05□□□□□ -1.92
PUB1YNL016W YBL059WP34224 193 aa3.05□□□□□ -1.92
PUB1YNL016W RPS20P38701 121 aaKnown RBP3.05□□□□□ -1.92
PUB1YNL016W NSG1P38837 291 aa3.05□□□□□ -1.92
PUB1YNL016W MIG3P39943 394 aa3.05□□□□□ -1.92
PUB1YNL016W PFS2P42841 465 aaKnown RBP3.05□□□□□ -1.92
PUB1YNL016W YGR039WP53225 103 aa3.05□□□□□ -1.92
PUB1YNL016W BOR1P53838 576 aa3.05□□□□□ -1.92
PUB1YNL016W YDR366CP87287 132 aa3.05□□□□□ -1.92
PUB1YNL016W MIX14Q04341 121 aa3.05□□□□□ -1.92
PUB1YNL016W SRL1Q08673 210 aa3.05□□□□□ -1.92
PUB1YNL016W YPL264CQ08980 353 aa3.05□□□□□ -1.92
PUB1YNL016W YDL211CQ12121 372 aa3.05□□□□□ -1.92
PUB1YNL016W BPH1P25356 2167 aa3.05□□□□□ -1.92
PUB1YNL016W URA2P07259 2214 aaKnown RBP3.04□□□□□ -1.92
PUB1YNL016W REP2P03872 296 aa3.04□□□□□ -1.92
PUB1YNL016W BET1P22804 142 aa3.04□□□□□ -1.92
PUB1YNL016W YCR101CP25607 182 aa3.04□□□□□ -1.92
PUB1YNL016W RPB9P27999 122 aa3.04□□□□□ -1.92
PUB1YNL016W LHP1P33399 275 aaKnown RBP3.04□□□□□ -1.92
PUB1YNL016W PAN3P36102 679 aaPredicted RBP3.04□□□□□ -1.92
PUB1YNL016W MRPL24P36525 258 aaPredicted RBP3.04□□□□□ -1.92
PUB1YNL016W RGI1P40043 161 aaPredicted RBP3.04□□□□□ -1.92
PUB1YNL016W SER2P42941 309 aa3.04□□□□□ -1.92
PUB1YNL016W YFR054CP43622 192 aa3.04□□□□□ -1.92
PUB1YNL016W FIP1P45976 327 aa3.04□□□□□ -1.92
PUB1YNL016W PGU1P47180 361 aa3.04□□□□□ -1.92
PUB1YNL016W HHO1P53551 258 aa3.04□□□□□ -1.92
PUB1YNL016W RPL22BP56628 122 aaKnown RBP3.04□□□□□ -1.92
PUB1YNL016W APS2Q00381 147 aa3.04□□□□□ -1.92
PUB1YNL016W YOL029CQ08187 201 aa3.04□□□□□ -1.92
PUB1YNL016W PPT2Q12036 173 aa3.04□□□□□ -1.92
PUB1YNL016W FYV7Q12247 151 aa3.04□□□□□ -1.92
PUB1YNL016W PSF1Q12488 208 aa3.04□□□□□ -1.92
PUB1YNL016W YLR412C-AQ3E742 68 aa3.04□□□□□ -1.92
PUB1YNL016W SGA1P08019 549 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 133.4 ms