RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W ROM2P51862 1356 aaKnown RBP1.85□□□□□ -2.11
SPO20YMR017W PMD1P32634 1753 aa1.85□□□□□ -2.11
SPO20YMR017W MGT1P26188 188 aa1.85□□□□□ -2.11
SPO20YMR017W CAF4P36130 643 aa1.85□□□□□ -2.11
SPO20YMR017W EDC3P39998 551 aaKnown RBP1.85□□□□□ -2.11
SPO20YMR017W TMA22P47089 198 aaPredicted RBP1.85□□□□□ -2.11
SPO20YMR017W DAD4P69851 72 aa1.85□□□□□ -2.11
SPO20YMR017W SHH3Q04487 196 aa1.85□□□□□ -2.11
SPO20YMR017W YMR315WQ04869 349 aaKnown RBP1.85□□□□□ -2.11
SPO20YMR017W RNH202Q05635 350 aa1.85□□□□□ -2.11
SPO20YMR017W LYS2P07702 1392 aa1.85□□□□□ -2.11
SPO20YMR017W GSC2P40989 1895 aa1.84□□□□□ -2.11
SPO20YMR017W TAH1P25638 111 aaPredicted RBP1.84□□□□□ -2.11
SPO20YMR017W PAM17P36147 197 aa1.84□□□□□ -2.11
SPO20YMR017W HYR1P40581 163 aaKnown RBP1.84□□□□□ -2.11
SPO20YMR017W COX8P04039 78 aa1.83□□□□□ -2.12
SPO20YMR017W AQY2P0CD90 149 aa1.83□□□□□ -2.12
SPO20YMR017W TIR1P10863 254 aa1.83□□□□□ -2.12
SPO20YMR017W TRX3P25372 127 aa1.83□□□□□ -2.12
SPO20YMR017W CUP9P41817 306 aa1.83□□□□□ -2.12
SPO20YMR017W YFL019CP43576 117 aa1.83□□□□□ -2.12
SPO20YMR017W YPR013CQ12145 317 aa1.83□□□□□ -2.12
SPO20YMR017W YHL042WP38729 150 aa1.82□□□□□ -2.12
SPO20YMR017W YFH7P43591 353 aa1.82□□□□□ -2.12
SPO20YMR017W YNL033WP53964 284 aa1.82□□□□□ -2.12
SPO20YMR017W YMR253CQ04835 414 aa1.82□□□□□ -2.12
SPO20YMR017W FIT2Q08906 153 aa1.82□□□□□ -2.12
SPO20YMR017W YDL085C-AQ3E7B7 68 aaKnown RBP1.82□□□□□ -2.12
SPO20YMR017W NSP1P14907 823 aaKnown RBP1.81□□□□□ -2.12
SPO20YMR017W YFL065CP43539 102 aa1.81□□□□□ -2.12
SPO20YMR017W VPS71Q03433 280 aa1.81□□□□□ -2.12
SPO20YMR017W GRX8Q05926 109 aa1.81□□□□□ -2.12
SPO20YMR017W FIG2P25653 1609 aa1.8□□□□□ -2.12
SPO20YMR017W MYO1P08964 1928 aa1.8□□□□□ -2.12
SPO20YMR017W YEL067CP39978 195 aa1.8□□□□□ -2.12
SPO20YMR017W SPC25P40014 221 aa1.8□□□□□ -2.12
SPO20YMR017W HOP2P53187 214 aa1.8□□□□□ -2.12
SPO20YMR017W THG1P53215 237 aaKnown RBP1.8□□□□□ -2.12
SPO20YMR017W NRK1P53915 240 aa1.8□□□□□ -2.12
SPO20YMR017W AIM34Q03673 198 aa1.8□□□□□ -2.12
SPO20YMR017W YMR252CQ04814 134 aa1.8□□□□□ -2.12
SPO20YMR017W YPR014CQ6B0W2 109 aa1.8□□□□□ -2.12
SPO20YMR017W SHG1P38337 142 aa1.79□□□□□ -2.12
SPO20YMR017W HPA3P39979 161 aa1.79□□□□□ -2.12
SPO20YMR017W SOK1P40317 901 aa1.79□□□□□ -2.12
SPO20YMR017W PGA1P53896 198 aa1.79□□□□□ -2.12
SPO20YMR017W YOR342CQ12182 319 aa1.79□□□□□ -2.12
SPO20YMR017W RAD50P12753 1312 aa1.79□□□□□ -2.12
SPO20YMR017W IDP1P21954 428 aaKnown RBP1.78□□□□□ -2.12
SPO20YMR017W ARO7P32178 256 aa1.78□□□□□ -2.12
SPO20YMR017W RPB7P34087 171 aa1.78□□□□□ -2.12
SPO20YMR017W SFK1P35735 353 aa1.78□□□□□ -2.12
SPO20YMR017W NSG1P38837 291 aa1.78□□□□□ -2.12
SPO20YMR017W GPI14P47088 403 aaKnown RBP1.78□□□□□ -2.12
SPO20YMR017W DIG2Q03373 323 aaKnown RBP1.78□□□□□ -2.12
SPO20YMR017W NKP2Q06162 153 aa1.78□□□□□ -2.12
SPO20YMR017W YHR212W-AP0CX91 67 aa1.77□□□□□ -2.13
SPO20YMR017W GSP2P32836 220 aaKnown RBP1.77□□□□□ -2.13
SPO20YMR017W GIM3P53900 129 aa1.77□□□□□ -2.13
SPO20YMR017W SNO1Q03144 224 aa1.77□□□□□ -2.13
SPO20YMR017W BRX1Q08235 291 aaKnown RBP1.77□□□□□ -2.13
SPO20YMR017W YLR412C-AQ3E742 68 aa1.77□□□□□ -2.13
SPO20YMR017W ECM29P38737 1868 aa1.77□□□□□ -2.13
SPO20YMR017W SAC3P46674 1301 aa1.76□□□□□ -2.13
SPO20YMR017W YEL008WP40001 126 aa1.76□□□□□ -2.13
SPO20YMR017W GCY1P14065 312 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
SPO20YMR017W YCL042WP25572 119 aa1.75□□□□□ -2.13
SPO20YMR017W FMP32P43557 207 aa1.75□□□□□ -2.13
SPO20YMR017W ALB1P47019 175 aaPredicted RBP1.75□□□□□ -2.13
SPO20YMR017W UPS3Q04006 179 aa1.75□□□□□ -2.13
SPO20YMR017W SHH4Q06236 168 aa1.75□□□□□ -2.13
SPO20YMR017W YET3Q07451 203 aa1.75□□□□□ -2.13
SPO20YMR017W MPD1Q12404 318 aaKnown RBP1.75□□□□□ -2.13
SPO20YMR017W MOT1P32333 1867 aa1.75□□□□□ -2.13
SPO20YMR017W FAS1P07149 2051 aaKnown RBP1.75□□□□□ -2.13
SPO20YMR017W AHC2P25649 128 aa1.74□□□□□ -2.13
SPO20YMR017W FYV12Q08559 129 aa1.74□□□□□ -2.13
SPO20YMR017W FLO1P32768 1537 aa1.74□□□□□ -2.13
SPO20YMR017W ATP7P30902 174 aa1.73□□□□□ -2.13
SPO20YMR017W YKR041WP36134 250 aa1.73□□□□□ -2.13
SPO20YMR017W NSA2P40078 261 aaKnown RBP1.73□□□□□ -2.13
SPO20YMR017W ATP20Q12233 115 aa1.73□□□□□ -2.13
SPO20YMR017W DGK1Q12382 290 aa1.73□□□□□ -2.13
SPO20YMR017W RIF1P29539 1916 aa1.73□□□□□ -2.13
SPO20YMR017W YCR023CP25351 611 aa1.72□□□□□ -2.13
SPO20YMR017W SBH1P52870 82 aa1.72□□□□□ -2.13
SPO20YMR017W STP22P25604 385 aa1.71□□□□□ -2.14
SPO20YMR017W YKL102CP34249 101 aa1.71□□□□□ -2.14
SPO20YMR017W NVJ1P38881 321 aa1.71□□□□□ -2.14
SPO20YMR017W GPI17Q04080 534 aa1.71□□□□□ -2.14
SPO20YMR017W GRE1Q08969 168 aa1.71□□□□□ -2.14
SPO20YMR017W DAS2Q12084 232 aa1.71□□□□□ -2.14
SPO20YMR017W PST2Q12335 198 aaKnown RBP1.71□□□□□ -2.14
SPO20YMR017W LAA1P39526 2014 aa1.7□□□□□ -2.14
SPO20YMR017W PIR1Q03178 341 aa1.7□□□□□ -2.14
SPO20YMR017W YMR007WQ03675 126 aa1.7□□□□□ -2.14
SPO20YMR017W RRP17Q04031 235 aaPredicted RBP1.7□□□□□ -2.14
SPO20YMR017W YOR015WQ12169 119 aa1.7□□□□□ -2.14
SPO20YMR017W COA3Q3E7B2 85 aa1.7□□□□□ -2.14
SPO20YMR017W ACC1Q00955 2233 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms