RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W NSL1Q12143 216 aa3.01□□□□□ -1.93
SIR1YKR101W BEM2P39960 2167 aaKnown RBP3.01□□□□□ -1.93
SIR1YKR101W VTC1P40046 129 aaRIP-Chip data3.01□□□□□ -1.93not detected
SIR1YKR101W YNR062CP53748 327 aa3.01□□□□□ -1.93
SIR1YKR101W YLR046CQ12253 270 aa3.01□□□□□ -1.93
SIR1YKR101W PET20Q99373 253 aa3.01□□□□□ -1.93
SIR1YKR101W CMD1P06787 147 aaKnown RBP3□□□□□ -1.93
SIR1YKR101W CPA1P07258 411 aaKnown RBP3□□□□□ -1.93
SIR1YKR101W RPS28BP0C0X0 67 aaKnown RBP3□□□□□ -1.93
SIR1YKR101W UMP1P38293 148 aa3□□□□□ -1.93
SIR1YKR101W YFL019CP43576 117 aa3□□□□□ -1.93
SIR1YKR101W DYN3Q04949 312 aa3□□□□□ -1.93
SIR1YKR101W RPS28AQ3E7X9 67 aaPredicted RBP3□□□□□ -1.93
SIR1YKR101W TEL1P38110 2787 aa3□□□□□ -1.93
SIR1YKR101W PAN3P36102 679 aaPredicted RBP3□□□□□ -1.93
SIR1YKR101W CSH1P38287 376 aa3□□□□□ -1.93
SIR1YKR101W YGR219WP53307 113 aa3□□□□□ -1.93
SIR1YKR101W MPC3P53311 146 aa3□□□□□ -1.93
SIR1YKR101W MIX17Q03667 156 aa3□□□□□ -1.93
SIR1YKR101W MRPS8Q03799 155 aa3□□□□□ -1.93
SIR1YKR101W YPR114WQ06107 315 aa3□□□□□ -1.93
SIR1YKR101W YPR014CQ6B0W2 109 aa3□□□□□ -1.93
SIR1YKR101W ODC2Q99297 307 aa3□□□□□ -1.93
SIR1YKR101W SLM6P38343 150 aa2.99□□□□□ -1.93
SIR1YKR101W AIM2P39721 246 aa2.99□□□□□ -1.93
SIR1YKR101W RFC2P40348 353 aa2.99□□□□□ -1.93
SIR1YKR101W DGK1Q12382 290 aa2.99□□□□□ -1.93
SIR1YKR101W YAR023CD6VPM8 179 aa2.98□□□□□ -1.93
SIR1YKR101W GPA2P10823 449 aa2.98□□□□□ -1.93
SIR1YKR101W MDH3P32419 343 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SIR1YKR101W CIS3P47001 227 aa2.98□□□□□ -1.93
SIR1YKR101W PIR1Q03178 341 aa2.98□□□□□ -1.93
SIR1YKR101W YPR127WQ06494 345 aa2.98□□□□□ -1.93
SIR1YKR101W OCA6Q12454 224 aa2.98□□□□□ -1.93
SIR1YKR101W TOR1P35169 2470 aa2.98□□□□□ -1.93
SIR1YKR101W YPR096CO13587 100 aa2.98□□□□□ -1.93
SIR1YKR101W POR1P04840 283 aaKnown RBP2.98□□□□□ -1.93
SIR1YKR101W SPO13P23624 291 aa2.98□□□□□ -1.93
SIR1YKR101W CLB6P32943 380 aa2.98□□□□□ -1.93
SIR1YKR101W YBR285WP38354 144 aa2.98□□□□□ -1.93
SIR1YKR101W RPL33BP41056 107 aaKnown RBP2.98□□□□□ -1.93
SIR1YKR101W SBH2P52871 88 aa2.98□□□□□ -1.93
SIR1YKR101W BOL2P53082 120 aa2.98□□□□□ -1.93
SIR1YKR101W YDC1Q02896 317 aa2.98□□□□□ -1.93
SIR1YKR101W YMR099CQ03161 297 aaKnown RBP2.98□□□□□ -1.93
SIR1YKR101W FSF1Q12029 327 aaKnown RBP2.98□□□□□ -1.93
SIR1YKR101W SEN1Q00416 2231 aaKnown RBP2.97□□□□□ -1.93
SIR1YKR101W IRA2P19158 3079 aa2.97□□□□□ -1.93
SIR1YKR101W CPR5P35176 225 aa2.97□□□□□ -1.93
SIR1YKR101W YOR062CP36025 268 aa2.97□□□□□ -1.93
SIR1YKR101W YER134CP40081 178 aa2.97□□□□□ -1.93
SIR1YKR101W MPA43P53583 542 aaPredicted RBP2.97□□□□□ -1.93
SIR1YKR101W YOR342CQ12182 319 aa2.97□□□□□ -1.93
SIR1YKR101W RAS2P01120 322 aaKnown RBP2.96□□□□□ -1.94
SIR1YKR101W SNC2P33328 115 aa2.96□□□□□ -1.94
SIR1YKR101W FCY21P40039 528 aa2.96□□□□□ -1.94
SIR1YKR101W PLP1Q04004 230 aa2.96□□□□□ -1.94
SIR1YKR101W YPR202WQ08993 238 aa2.96□□□□□ -1.94
SIR1YKR101W MSB2P32334 1306 aa2.96□□□□□ -1.94
SIR1YKR101W ERV15P38312 142 aa2.96□□□□□ -1.94
SIR1YKR101W NSG1P38837 291 aa2.96□□□□□ -1.94
SIR1YKR101W SMX2P40204 77 aaKnown RBP2.96□□□□□ -1.94
SIR1YKR101W EMC4P53073 190 aa2.96□□□□□ -1.94
SIR1YKR101W NQM1P53228 333 aaPredicted RBP2.96□□□□□ -1.94
SIR1YKR101W TIM13P53299 105 aa2.96□□□□□ -1.94
SIR1YKR101W YDL180WQ12301 547 aa2.96□□□□□ -1.94
SIR1YKR101W GTT2Q12390 233 aa2.96□□□□□ -1.94
SIR1YKR101W PEX4P29340 183 aa2.95□□□□□ -1.94
SIR1YKR101W ACP1P32463 125 aa2.95□□□□□ -1.94
SIR1YKR101W SRX1P36077 127 aa2.95□□□□□ -1.94
SIR1YKR101W TIR3P40552 269 aa2.95□□□□□ -1.94
SIR1YKR101W TTI2P47168 421 aa2.95□□□□□ -1.94
SIR1YKR101W FYV12Q08559 129 aa2.95□□□□□ -1.94
SIR1YKR101W EMC6Q12431 108 aa2.95□□□□□ -1.94
SIR1YKR101W NSP1P14907 823 aaKnown RBP2.94□□□□□ -1.94
SIR1YKR101W SCL1P21243 252 aaKnown RBP2.94□□□□□ -1.94
SIR1YKR101W UBC8P28263 218 aa2.94□□□□□ -1.94
SIR1YKR101W NHP10Q03435 203 aa2.94□□□□□ -1.94
SIR1YKR101W UBI4P0CG63 381 aaKnown RBP2.94□□□□□ -1.94
SIR1YKR101W ETR1P38071 380 aa2.94□□□□□ -1.94
SIR1YKR101W RCF2P53721 224 aa2.94□□□□□ -1.94
SIR1YKR101W ATG10Q07879 167 aa2.94□□□□□ -1.94
SIR1YKR101W YCR099CP25657 155 aa2.93□□□□□ -1.94
SIR1YKR101W CYC2P38909 366 aa2.93□□□□□ -1.94
SIR1YKR101W YNL200CP40165 246 aaKnown RBP2.93□□□□□ -1.94
SIR1YKR101W THI74Q04083 370 aa2.93□□□□□ -1.94
SIR1YKR101W YLR412C-AQ3E742 68 aa2.93□□□□□ -1.94
SIR1YKR101W MDM35O60200 86 aa2.92□□□□□ -1.94
SIR1YKR101W TIR1P10863 254 aa2.92□□□□□ -1.94
SIR1YKR101W NOP1P15646 327 aaKnown RBP2.92□□□□□ -1.94
SIR1YKR101W PEP8P40335 379 aa2.92□□□□□ -1.94
SIR1YKR101W ERJ5P43613 295 aaPredicted RBP2.92□□□□□ -1.94
SIR1YKR101W YGL101WP53144 215 aa2.92□□□□□ -1.94
SIR1YKR101W YKL068W-AQ3E826 78 aa2.92□□□□□ -1.94
SIR1YKR101W FYV4P38783 130 aaPredicted RBP2.92□□□□□ -1.94
SIR1YKR101W GIM4P40005 111 aaKnown RBP2.92□□□□□ -1.94
SIR1YKR101W ORM1P53224 222 aa2.92□□□□□ -1.94
SIR1YKR101W VPS71Q03433 280 aa2.92□□□□□ -1.94
SIR1YKR101W SRP102P36057 244 aaPredicted RBP2.91□□□□□ -1.94
SIR1YKR101W YFR054CP43622 192 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms