RNA–Protein interactions for RNA: YJR153W

PGU1, Transcript of Endo-polygalacturonase, yeast

Gene PGU1, Length 1,086 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGU1	YJR153W	DOG2	P38773	246 aa		4.26	□□□□□ -1.73
PGU1	YJR153W	DOG1	P38774	246 aa		4.26	□□□□□ -1.73
PGU1	YJR153W	MPC2	P38857	129 aa		4.26	□□□□□ -1.73
PGU1	YJR153W	SNX4	P47057	423 aa		4.26	□□□□□ -1.73
PGU1	YJR153W	ARP3	P47117	449 aa	Known RBP	4.26	□□□□□ -1.73
PGU1	YJR153W	UBC11	P52492	156 aa		4.26	□□□□□ -1.73
PGU1	YJR153W	NIF3	P53081	288 aa		4.26	□□□□□ -1.73
PGU1	YJR153W	ARO8	P53090	500 aa	Known RBP	4.26	□□□□□ -1.73
PGU1	YJR153W	PEX10	Q05568	337 aa		4.26	□□□□□ -1.73
PGU1	YJR153W	SPS2	P08459	502 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	YKR045C	P36138	183 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	YBL071C	P38185	102 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	YBR242W	P38331	238 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	SRP14	P38985	146 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	MBB1	P39534	108 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	NSA2	P40078	261 aa	Known RBP	4.25	□□□□□ -1.73
PGU1	YJR153W	POG1	P40473	351 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	YGR050C	P53231	118 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	YGR219W	P53307	113 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	YMR181C	Q03231	154 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	ATG5	Q12380	294 aa		4.25	□□□□□ -1.73
PGU1	YJR153W	LSO2	Q3E772	92 aa	Known RBP	4.25	□□□□□ -1.73
PGU1	YJR153W	ALK2	P32789	676 aa	Predicted RBP	4.24	□□□□□ -1.73
PGU1	YJR153W	POR2	P40478	281 aa		4.24	□□□□□ -1.73
PGU1	YJR153W	DFG10	P40526	253 aa		4.24	□□□□□ -1.73
PGU1	YJR153W	BUL1	P48524	976 aa		4.24	□□□□□ -1.73
PGU1	YJR153W	MSO1	P53604	210 aa	Known RBP	4.24	□□□□□ -1.73
PGU1	YJR153W	YIP3	P53633	176 aa		4.24	□□□□□ -1.73
PGU1	YJR153W	VPS28	Q02767	242 aa		4.24	□□□□□ -1.73
PGU1	YJR153W	YML122C	Q03207	126 aa		4.24	□□□□□ -1.73
PGU1	YJR153W	YMR090W	Q04304	227 aa	Known RBP	4.24	□□□□□ -1.73
PGU1	YJR153W	GRH1	Q04410	372 aa	Known RBP	4.24	□□□□□ -1.73
PGU1	YJR153W	BER1	Q06688	274 aa	Known RBP	4.24	□□□□□ -1.73
PGU1	YJR153W	URA5	P13298	226 aa	Known RBP	4.23	□□□□□ -1.73
PGU1	YJR153W	YGL117W	P53133	265 aa		4.23	□□□□□ -1.73
PGU1	YJR153W	YDR274C	P87283	123 aa		4.23	□□□□□ -1.73
PGU1	YJR153W	IRC23	Q08416	157 aa		4.23	□□□□□ -1.73
PGU1	YJR153W	CSM4	Q08955	156 aa		4.23	□□□□□ -1.73
PGU1	YJR153W	YPS3	Q12303	508 aa		4.23	□□□□□ -1.73
PGU1	YJR153W	AIM45	Q12480	344 aa	Known RBP	4.23	□□□□□ -1.73
PGU1	YJR153W	YKL183C-A	Q3E765	70 aa		4.23	□□□□□ -1.73
PGU1	YJR153W	TPI1	P00942	248 aa	Known RBP	4.22	□□□□□ -1.73
PGU1	YJR153W	SEC22	P22214	214 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	YAR068W	P39564	161 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	YKE4	P40544	346 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	YIR035C	P40579	254 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	PKP2	P53170	491 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	ALG13	P53178	202 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	SWT21	P53873	357 aa	Predicted RBP	4.22	□□□□□ -1.73
PGU1	YJR153W	DYN2	Q02647	92 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	EST3	Q03096	181 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	FEX2	Q08991	375 aa		4.22	□□□□□ -1.73
PGU1	YJR153W	SOD1	P00445	154 aa	Known RBP	4.21	□□□□□ -1.74
PGU1	YJR153W	MRS4	P23500	304 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	LAC1	P28496	418 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PGU1	YJR153W	YKL162C	P36052	402 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	AVT5	P38176	459 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	ECM33	P38248	429 aa	Known RBP	4.21	□□□□□ -1.74
PGU1	YJR153W	YPC1	P38298	316 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	FLO5	P38894	1075 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	SYG1	P40528	902 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	CAX4	P53223	239 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	PDR17	P53844	350 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	FYV6	P53913	173 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	GPI15	P53961	229 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	SDH7	Q04401	133 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	LDS2	Q08218	356 aa		4.21	□□□□□ -1.74
PGU1	YJR153W	TPT1	Q12272	230 aa	Known RBP	4.21	□□□□□ -1.74
PGU1	YJR153W	CYC3	P06182	269 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	FCY2	P17064	533 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	MDM10	P18409	493 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	POP5	P28005	173 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	FPR2	P32472	135 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	YGR210C	P42942	411 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	MRPS16	Q02608	121 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	FRQ1	Q06389	190 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	YDL242W	Q07746	117 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	TIM18	Q08749	192 aa		4.2	□□□□□ -1.74
PGU1	YJR153W	PUT1	P09368	476 aa		4.19	□□□□□ -1.74
PGU1	YJR153W	SNF11	P38956	169 aa		4.19	□□□□□ -1.74
PGU1	YJR153W	YER137C	P40083	148 aa	Known RBP	4.19	□□□□□ -1.74
PGU1	YJR153W	RTS2	P40962	232 aa		4.19	□□□□□ -1.74
PGU1	YJR153W	AIM24	P47127	394 aa		4.19	□□□□□ -1.74
PGU1	YJR153W	YIF1	P53845	314 aa	Known RBP	4.19	□□□□□ -1.74
PGU1	YJR153W	FEX1	Q08913	375 aa		4.19	□□□□□ -1.74
PGU1	YJR153W	YPL264C	Q08980	353 aa		4.19	□□□□□ -1.74
PGU1	YJR153W	YLR146W-A	Q2V2P1	62 aa		4.19	□□□□□ -1.74
PGU1	YJR153W	YDR157W	A0A023PZE8	133 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	RPL12A	P0CX53	165 aa	Known RBP	4.18	□□□□□ -1.74
PGU1	YJR153W	RPL12B	P0CX54	165 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	ACB1	P31787	87 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	DER1	P38307	211 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	SLM6	P38343	150 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	TDA4	P47153	279 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	ORM1	P53224	222 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	UBC7	Q02159	165 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	ERP1	Q05359	219 aa	Known RBP	4.18	□□□□□ -1.74
PGU1	YJR153W	ATG39	Q06159	398 aa		4.18	□□□□□ -1.74
PGU1	YJR153W	YPL162C	Q12042	273 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms