RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W MDM10P18409 493 aa3.73□□□□□ -1.81
AVT1YJR001W MRPL20P22354 195 aaPredicted RBP3.73□□□□□ -1.81
AVT1YJR001W YCR090CP25654 182 aaKnown RBP3.73□□□□□ -1.81
AVT1YJR001W RPB11P38902 120 aa3.73□□□□□ -1.81
AVT1YJR001W AVT2P39981 480 aa3.73□□□□□ -1.81
AVT1YJR001W YFL065CP43539 102 aa3.73□□□□□ -1.81
AVT1YJR001W ATG18P43601 500 aa3.73□□□□□ -1.81
AVT1YJR001W RRT5P43607 289 aa3.73□□□□□ -1.81
AVT1YJR001W ATP23P53722 227 aa3.73□□□□□ -1.81
AVT1YJR001W PET191Q02772 108 aa3.73□□□□□ -1.81
AVT1YJR001W SHH4Q06236 168 aa3.73□□□□□ -1.81
AVT1YJR001W PIN3Q06449 215 aa3.73□□□□□ -1.81
AVT1YJR001W PAU23Q07987 124 aa3.73□□□□□ -1.81
AVT1YJR001W TIM18Q08749 192 aa3.73□□□□□ -1.81
AVT1YJR001W YPR203WQ08994 102 aa3.73□□□□□ -1.81
AVT1YJR001W YPL245WQ12179 454 aaKnown RBP3.73□□□□□ -1.81
AVT1YJR001W PAU17Q12370 124 aa3.73□□□□□ -1.81
AVT1YJR001W VMA9Q3E7B6 73 aa3.73□□□□□ -1.81
AVT1YJR001W YPL229WQ99395 206 aa3.73□□□□□ -1.81
AVT1YJR001W RIF1P29539 1916 aa3.73□□□□□ -1.81
AVT1YJR001W YAR066WP0CX18 203 aa3.72□□□□□ -1.81
AVT1YJR001W YHR214WP0CX19 203 aa3.72□□□□□ -1.81
AVT1YJR001W MRPL11P36521 249 aaPredicted RBP3.72□□□□□ -1.81
AVT1YJR001W SDH4P37298 181 aa3.72□□□□□ -1.81
AVT1YJR001W PDX3P38075 228 aaKnown RBP3.72□□□□□ -1.81
AVT1YJR001W AVT7P40501 490 aa3.72□□□□□ -1.81
AVT1YJR001W YNL320WP42840 284 aa3.72□□□□□ -1.81
AVT1YJR001W YFR054CP43622 192 aa3.72□□□□□ -1.81
AVT1YJR001W ARP3P47117 449 aaKnown RBP3.72□□□□□ -1.81
AVT1YJR001W GEP7P53171 287 aa3.72□□□□□ -1.81
AVT1YJR001W SPG4Q04438 115 aa3.72□□□□□ -1.81
AVT1YJR001W KEI1Q06346 221 aa3.72□□□□□ -1.81
AVT1YJR001W SNX3Q08826 162 aaKnown RBP3.72□□□□□ -1.81
AVT1YJR001W YPL264CQ08980 353 aa3.72□□□□□ -1.81
AVT1YJR001W YPS3Q12303 508 aa3.72□□□□□ -1.81
AVT1YJR001W YLR122CQ12312 125 aa3.72□□□□□ -1.81
AVT1YJR001W IZH2Q12442 317 aa3.72□□□□□ -1.81
AVT1YJR001W YBL112CQ3E7Y4 105 aa3.72□□□□□ -1.81
AVT1YJR001W ADH1P00330 348 aaKnown RBP3.72□□□□□ -1.81
AVT1YJR001W CPA1P07258 411 aaKnown RBP3.72□□□□□ -1.81
AVT1YJR001W ERG4P25340 473 aa3.72□□□□□ -1.81
AVT1YJR001W MIG1P27705 504 aa3.72□□□□□ -1.81
AVT1YJR001W YMC1P32331 307 aa3.72□□□□□ -1.81
AVT1YJR001W UTR5P32630 166 aa3.72□□□□□ -1.81
AVT1YJR001W VMA11P32842 164 aa3.72□□□□□ -1.81
AVT1YJR001W MED6P38782 295 aa3.72□□□□□ -1.81
AVT1YJR001W PRM5P40476 318 aa3.72□□□□□ -1.81
AVT1YJR001W SMD3P43321 101 aaKnown RBP3.72□□□□□ -1.81
AVT1YJR001W BAT2P47176 376 aaKnown RBP3.72□□□□□ -1.81
AVT1YJR001W YNL033WP53964 284 aa3.72□□□□□ -1.81
AVT1YJR001W YNL019CP53975 284 aa3.72□□□□□ -1.81
AVT1YJR001W MRPS16Q02608 121 aa3.72□□□□□ -1.81
AVT1YJR001W GAS3Q03655 524 aa3.72□□□□□ -1.81
AVT1YJR001W YMR082CQ04276 118 aa3.72□□□□□ -1.81
AVT1YJR001W YMR103CQ04436 120 aa3.72□□□□□ -1.81
AVT1YJR001W CCH1P50077 2039 aa3.71□□□□□ -1.82
AVT1YJR001W MBF1O14467 151 aaKnown RBP3.71□□□□□ -1.82
AVT1YJR001W RPL30P14120 105 aaKnown RBP3.71□□□□□ -1.82
AVT1YJR001W PET8P38921 284 aa3.71□□□□□ -1.82
AVT1YJR001W MSL1P40567 111 aaPredicted RBP3.71□□□□□ -1.82
AVT1YJR001W YMR321CQ04898 105 aa3.71□□□□□ -1.82
AVT1YJR001W NAT5Q08689 176 aa3.71□□□□□ -1.82
AVT1YJR001W PRM3Q08931 133 aa3.71□□□□□ -1.82
AVT1YJR001W YOR097CQ12274 175 aaPredicted RBP3.71□□□□□ -1.82
AVT1YJR001W SRP21P32342 167 aa3.7□□□□□ -1.82
AVT1YJR001W YBR032WP38223 100 aa3.7□□□□□ -1.82
AVT1YJR001W AIM25P47140 327 aa3.7□□□□□ -1.82
AVT1YJR001W PGA1P53896 198 aa3.7□□□□□ -1.82
AVT1YJR001W IES4Q08561 116 aa3.7□□□□□ -1.82
AVT1YJR001W FIT3Q08907 204 aa3.7□□□□□ -1.82
AVT1YJR001W YDR029WQ12111 104 aa3.7□□□□□ -1.82
AVT1YJR001W MED11Q99278 115 aa3.7□□□□□ -1.82
AVT1YJR001W SNF4P12904 322 aa3.7□□□□□ -1.82
AVT1YJR001W MSI1P13712 422 aa3.7□□□□□ -1.82
AVT1YJR001W HSP26P15992 214 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
AVT1YJR001W TOM40P23644 387 aaKnown RBP3.7□□□□□ -1.82
AVT1YJR001W YKL102CP34249 101 aa3.7□□□□□ -1.82
AVT1YJR001W MRP21P38175 177 aa3.7□□□□□ -1.82
AVT1YJR001W YHR140WP38842 239 aa3.7□□□□□ -1.82
AVT1YJR001W YGR164WP53291 111 aa3.7□□□□□ -1.82
AVT1YJR001W SCW4P53334 386 aaKnown RBP3.7□□□□□ -1.82
AVT1YJR001W YPL039WQ03080 316 aa3.7□□□□□ -1.82
AVT1YJR001W FIT1Q04433 528 aa3.7□□□□□ -1.82
AVT1YJR001W MCA1Q08601 432 aa3.7□□□□□ -1.82
AVT1YJR001W DGA1Q08650 418 aa3.7□□□□□ -1.82
AVT1YJR001W RRG7Q08774 242 aaPredicted RBP3.7□□□□□ -1.82
AVT1YJR001W EAF3Q12432 401 aa3.7□□□□□ -1.82
AVT1YJR001W ECM29P38737 1868 aa3.69□□□□□ -1.82
AVT1YJR001W ECM12O13529 151 aa3.69□□□□□ -1.82
AVT1YJR001W AQY1P0CD91 305 aa3.69□□□□□ -1.82
AVT1YJR001W MRS3P10566 314 aa3.69□□□□□ -1.82
AVT1YJR001W CCS1P40202 249 aaKnown RBP3.69□□□□□ -1.82
AVT1YJR001W VMA21P41806 77 aa3.69□□□□□ -1.82
AVT1YJR001W GLC7P32598 312 aaKnown RBP3.68□□□□□ -1.82
AVT1YJR001W ARN2P38724 620 aa3.68□□□□□ -1.82
AVT1YJR001W FLX1P40464 311 aa3.68□□□□□ -1.82
AVT1YJR001W OST1P41543 476 aaKnown RBP3.68□□□□□ -1.82
AVT1YJR001W GPI2P46961 280 aa3.68□□□□□ -1.82
AVT1YJR001W YPL162CQ12042 273 aa3.68□□□□□ -1.82
AVT1YJR001W RPS25BP0C0T4 108 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms