RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C RPB8P20436 146 aa4.85□□□□□ -1.63
SFB3YHR098C PHD1P36093 366 aa4.85□□□□□ -1.63
SFB3YHR098C YHR138CP38841 114 aaPredicted RBP4.85□□□□□ -1.63
SFB3YHR098C YGR269WP40326 108 aa4.85□□□□□ -1.63
SFB3YHR098C YNR014WP53719 212 aa4.85□□□□□ -1.63
SFB3YHR098C PFA4Q12006 378 aa4.85□□□□□ -1.63
SFB3YHR098C FOL3Q12676 427 aaPredicted RBP4.85□□□□□ -1.63
SFB3YHR098C RPS22BQ3E7Y3 130 aaKnown RBP4.85□□□□□ -1.63
SFB3YHR098C CDC36P06100 191 aaPredicted RBP4.85□□□□□ -1.63
SFB3YHR098C RPL20AP0CX23 172 aaKnown RBP4.85□□□□□ -1.63
SFB3YHR098C RPL20BP0CX24 172 aaPredicted RBP4.85□□□□□ -1.63
SFB3YHR098C FUB1P25659 250 aa4.85□□□□□ -1.63
SFB3YHR098C UGX2P32772 223 aa4.85□□□□□ -1.63
SFB3YHR098C YOR062CP36025 268 aa4.85□□□□□ -1.63
SFB3YHR098C SHR5P41912 237 aa4.85□□□□□ -1.63
SFB3YHR098C TPC1P53257 314 aa4.85□□□□□ -1.63
SFB3YHR098C RIM9Q04734 239 aa4.85□□□□□ -1.63
SFB3YHR098C YPL264CQ08980 353 aa4.85□□□□□ -1.63
SFB3YHR098C GEP5Q12393 293 aa4.85□□□□□ -1.63
SFB3YHR098C FRM2P37261 193 aa4.84□□□□□ -1.63
SFB3YHR098C YNL208WP40159 199 aaKnown RBP4.84□□□□□ -1.63
SFB3YHR098C MOB1P40484 314 aa4.84□□□□□ -1.63
SFB3YHR098C YIL089WP40500 205 aa4.84□□□□□ -1.63
SFB3YHR098C DFG10P40526 253 aa4.84□□□□□ -1.63
SFB3YHR098C DYN2Q02647 92 aa4.84□□□□□ -1.63
SFB3YHR098C YER190C-BP0CX94 160 aa4.84□□□□□ -1.63
SFB3YHR098C YEL077W-AP0CX95 160 aa4.84□□□□□ -1.63
SFB3YHR098C YGR296C-BP0CX96 160 aa4.84□□□□□ -1.63
SFB3YHR098C YPL283W-BP0CX97 160 aa4.84□□□□□ -1.63
SFB3YHR098C YPR204C-AP0CX98 160 aa4.84□□□□□ -1.63
SFB3YHR098C SRB5P32585 307 aa4.84□□□□□ -1.63
SFB3YHR098C YHR130CP38834 111 aa4.84□□□□□ -1.63
SFB3YHR098C YNL200CP40165 246 aaKnown RBP4.84□□□□□ -1.63
SFB3YHR098C YFL065CP43539 102 aa4.84□□□□□ -1.63
SFB3YHR098C TDA4P47153 279 aa4.84□□□□□ -1.63
SFB3YHR098C MCH4Q08268 501 aa4.84□□□□□ -1.63
SFB3YHR098C YPR203WQ08994 102 aa4.84□□□□□ -1.63
SFB3YHR098C YPQ1Q12010 308 aa4.84□□□□□ -1.63
SFB3YHR098C QCR9P22289 66 aa4.83□□□□□ -1.64
SFB3YHR098C TOA2P32774 122 aa4.83□□□□□ -1.64
SFB3YHR098C YBL059WP34224 193 aa4.83□□□□□ -1.64
SFB3YHR098C YER085CP40058 173 aa4.83□□□□□ -1.64
SFB3YHR098C SWT21P53873 357 aaPredicted RBP4.83□□□□□ -1.64
SFB3YHR098C HUG1Q6Q5K6 68 aa4.83□□□□□ -1.64
SFB3YHR098C YKR104WP0CE69 306 aa4.83□□□□□ -1.64
SFB3YHR098C ZRT1P32804 376 aa4.83□□□□□ -1.64
SFB3YHR098C WSC4P38739 605 aa4.83□□□□□ -1.64
SFB3YHR098C YAL037WP39728 267 aa4.83□□□□□ -1.64
SFB3YHR098C CUZ1P53899 274 aa4.83□□□□□ -1.64
SFB3YHR098C YLR111WQ12528 110 aa4.83□□□□□ -1.64
SFB3YHR098C YBR255C-AQ3E776 120 aa4.83□□□□□ -1.64
SFB3YHR098C PCL1P24867 279 aa4.82□□□□□ -1.64
SFB3YHR098C MPP6P53725 186 aaPredicted RBP4.82□□□□□ -1.64
SFB3YHR098C MCP1Q12106 302 aa4.82□□□□□ -1.64
SFB3YHR098C POC4Q12245 148 aaPredicted RBP4.82□□□□□ -1.64
SFB3YHR098C SRP21P32342 167 aa4.82□□□□□ -1.64
SFB3YHR098C ECM14P38836 430 aa4.82□□□□□ -1.64
SFB3YHR098C SAS2P40963 338 aa4.82□□□□□ -1.64
SFB3YHR098C YIP5P53108 310 aa4.82□□□□□ -1.64
SFB3YHR098C CPD1P53314 239 aa4.82□□□□□ -1.64
SFB3YHR098C YML079WQ03629 201 aa4.82□□□□□ -1.64
SFB3YHR098C RPL35AP0CX84 120 aaKnown RBP4.82□□□□□ -1.64
SFB3YHR098C RPL35BP0CX85 120 aaKnown RBP4.82□□□□□ -1.64
SFB3YHR098C FCY2P17064 533 aa4.82□□□□□ -1.64
SFB3YHR098C COX15P40086 486 aa4.82□□□□□ -1.64
SFB3YHR098C CUP9P41817 306 aa4.82□□□□□ -1.64
SFB3YHR098C VPS71Q03433 280 aa4.82□□□□□ -1.64
SFB3YHR098C YPL229WQ99395 206 aa4.82□□□□□ -1.64
SFB3YHR098C YOX1P34161 385 aa4.81□□□□□ -1.64
SFB3YHR098C ARP3P47117 449 aaKnown RBP4.81□□□□□ -1.64
SFB3YHR098C MIC27P50945 234 aa4.81□□□□□ -1.64
SFB3YHR098C VEL1P53058 206 aa4.81□□□□□ -1.64
SFB3YHR098C YGL118CP53132 145 aa4.81□□□□□ -1.64
SFB3YHR098C CRZ1P53968 678 aa4.81□□□□□ -1.64
SFB3YHR098C YLR365WQ7LIF2 110 aa4.81□□□□□ -1.64
SFB3YHR098C MOH1P38191 138 aa4.81□□□□□ -1.64
SFB3YHR098C YAR068WP39564 161 aa4.81□□□□□ -1.64
SFB3YHR098C POP3P53833 195 aaPredicted RBP4.81□□□□□ -1.64
SFB3YHR098C YPR098CQ06089 161 aa4.81□□□□□ -1.64
SFB3YHR098C DER1P38307 211 aa4.8□□□□□ -1.64
SFB3YHR098C YGP1P38616 354 aaKnown RBP4.8□□□□□ -1.64
SFB3YHR098C ATX1P38636 73 aa4.8□□□□□ -1.64
SFB3YHR098C CYB5P40312 120 aa4.8□□□□□ -1.64
SFB3YHR098C VHS2P40463 436 aa4.8□□□□□ -1.64
SFB3YHR098C DSK2P48510 373 aa4.8□□□□□ -1.64
SFB3YHR098C BRP1P53194 125 aa4.8□□□□□ -1.64
SFB3YHR098C ATG21Q02887 496 aa4.8□□□□□ -1.64
SFB3YHR098C DPP1Q05521 289 aa4.8□□□□□ -1.64
SFB3YHR098C YLR361C-AQ3E795 98 aa4.8□□□□□ -1.64
SFB3YHR098C RPL7AP05737 244 aaKnown RBP4.8□□□□□ -1.64
SFB3YHR098C MRS1P07266 363 aa4.8□□□□□ -1.64
SFB3YHR098C SEC72P39742 193 aaKnown RBP4.8□□□□□ -1.64
SFB3YHR098C OST2P46964 130 aa4.8□□□□□ -1.64
SFB3YHR098C SDS23P53172 527 aa4.8□□□□□ -1.64
SFB3YHR098C FHN1P53279 174 aa4.8□□□□□ -1.64
SFB3YHR098C BET5Q03630 159 aa4.8□□□□□ -1.64
SFB3YHR098C YFH1Q07540 174 aa4.8□□□□□ -1.64
SFB3YHR098C NCE102Q12207 173 aaRIP-Chip data4.8□□□□□ -1.64not detected
SFB3YHR098C YIR021W-AQ3E739 70 aa4.8□□□□□ -1.64
SFB3YHR098C YPR108W-AQ3E7B3 70 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 154.6 ms