RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	YFR032C-B	Q8TGU2	87 aa		4.09	□□□□□ -1.76
APL6	YGR261C	CAT8	P39113	1433 aa		4.08	□□□□□ -1.76
APL6	YGR261C	TY1B-GR3	Q12316	1755 aa		4.08	□□□□□ -1.76
APL6	YGR261C	TY1B-OR	Q92393	1755 aa		4.08	□□□□□ -1.76
APL6	YGR261C	CHS7	P38843	316 aa		4.08	□□□□□ -1.76
APL6	YGR261C	VPS25	P47142	202 aa		4.08	□□□□□ -1.76
APL6	YGR261C	YDR215C	Q12240	137 aa		4.08	□□□□□ -1.76
APL6	YGR261C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.08	□□□□□ -1.76
APL6	YGR261C	YMR316C-A	I2HB70	103 aa		4.07	□□□□□ -1.76
APL6	YGR261C	CPA1	P07258	411 aa	Known RBP	4.07	□□□□□ -1.76
APL6	YGR261C	YAR066W	P0CX18	203 aa		4.07	□□□□□ -1.76
APL6	YGR261C	YHR214W	P0CX19	203 aa		4.07	□□□□□ -1.76
APL6	YGR261C	RPS8A	P0CX39	200 aa	Known RBP	4.07	□□□□□ -1.76
APL6	YGR261C	RPS8B	P0CX40	200 aa	Known RBP	4.07	□□□□□ -1.76
APL6	YGR261C	ERG4	P25340	473 aa		4.07	□□□□□ -1.76
APL6	YGR261C	AVT7	P40501	490 aa		4.07	□□□□□ -1.76
APL6	YGR261C	SEN15	Q04675	128 aa		4.07	□□□□□ -1.76
APL6	YGR261C	FIT3	Q08907	204 aa		4.07	□□□□□ -1.76
APL6	YGR261C	INO4	P13902	151 aa		4.07	□□□□□ -1.76
APL6	YGR261C	HSP12	P22943	109 aa	Known RBP	4.07	□□□□□ -1.76
APL6	YGR261C	YCR025C	P25352	136 aa		4.07	□□□□□ -1.76
APL6	YGR261C	TMA19	P35691	167 aa	Known RBP	4.07	□□□□□ -1.76
APL6	YGR261C	SFT2	P38166	215 aa		4.07	□□□□□ -1.76
APL6	YGR261C	EDC2	P40023	145 aa	Predicted RBP	4.07	□□□□□ -1.76
APL6	YGR261C	YPL039W	Q03080	316 aa		4.07	□□□□□ -1.76
APL6	YGR261C	YOR376W-A	Q3E805	51 aa		4.07	□□□□□ -1.76
APL6	YGR261C	YOS1	Q3E834	85 aa		4.07	□□□□□ -1.76
APL6	YGR261C	TDA8	Q6B2U8	126 aa		4.07	□□□□□ -1.76
APL6	YGR261C	IQG1	Q12280	1495 aa		4.07	□□□□□ -1.76
APL6	YGR261C	SNQ2	P32568	1501 aa	Known RBP	4.07	□□□□□ -1.76
APL6	YGR261C	HIS7	P33734	552 aa	Known RBP	4.06	□□□□□ -1.76
APL6	YGR261C	YGL193C	P53097	103 aa		4.06	□□□□□ -1.76
APL6	YGR261C	YPL245W	Q12179	454 aa	Known RBP	4.06	□□□□□ -1.76
APL6	YGR261C	RPS14A	P06367	137 aa	Known RBP	4.06	□□□□□ -1.76
APL6	YGR261C	CDC43	P18898	376 aa		4.06	□□□□□ -1.76
APL6	YGR261C	COQ2	P32378	372 aa		4.06	□□□□□ -1.76
APL6	YGR261C	PAM17	P36147	197 aa		4.06	□□□□□ -1.76
APL6	YGR261C	RPS14B	P39516	138 aa	Known RBP	4.06	□□□□□ -1.76
APL6	YGR261C	TIR3	P40552	269 aa		4.06	□□□□□ -1.76
APL6	YGR261C	SNN1	P48232	102 aa		4.06	□□□□□ -1.76
APL6	YGR261C	EST3	Q03096	181 aa		4.06	□□□□□ -1.76
APL6	YGR261C	MSW1	P04803	379 aa		4.05	□□□□□ -1.76
APL6	YGR261C	AGA1	P32323	725 aa		4.05	□□□□□ -1.76
APL6	YGR261C	NSG1	P38837	291 aa		4.05	□□□□□ -1.76
APL6	YGR261C	SPO73	P40031	143 aa		4.05	□□□□□ -1.76
APL6	YGR261C	EMC4	P53073	190 aa		4.05	□□□□□ -1.76
APL6	YGR261C	CLD1	P53264	445 aa		4.05	□□□□□ -1.76
APL6	YGR261C	YGR164W	P53291	111 aa		4.05	□□□□□ -1.76
APL6	YGR261C	SMD1	Q02260	146 aa	Predicted RBP	4.05	□□□□□ -1.76
APL6	YGR261C	NUP170	P38181	1502 aa		4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-JR2	P47100	1755 aa	Known RBP	4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-ER2	Q03619	1755 aa		4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-MR1	Q04214	1755 aa		4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-NL1	Q12112	1755 aa		4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-GR1	Q12141	1755 aa		4.05	□□□□□ -1.76
APL6	YGR261C	TY1B-BL	Q12490	1755 aa		4.05	□□□□□ -1.76
APL6	YGR261C	YGL010W	P25338	174 aa		4.05	□□□□□ -1.76
APL6	YGR261C	VMA11	P32842	164 aa		4.05	□□□□□ -1.76
APL6	YGR261C	MRPL11	P36521	249 aa	Predicted RBP	4.05	□□□□□ -1.76
APL6	YGR261C	SMP1	P38128	452 aa		4.05	□□□□□ -1.76
APL6	YGR261C	SWT21	P53873	357 aa	Predicted RBP	4.05	□□□□□ -1.76
APL6	YGR261C	ATO3	Q12359	275 aa		4.05	□□□□□ -1.76
APL6	YGR261C	PDR10	P51533	1564 aa		4.05	□□□□□ -1.76
APL6	YGR261C	VPS15	P22219	1454 aa		4.04	□□□□□ -1.76
APL6	YGR261C	SCW4	P53334	386 aa	Known RBP	4.04	□□□□□ -1.76
APL6	YGR261C	RSM10	Q03201	203 aa		4.04	□□□□□ -1.76
APL6	YGR261C	YMR082C	Q04276	118 aa		4.04	□□□□□ -1.76
APL6	YGR261C	YMR090W	Q04304	227 aa	Known RBP	4.04	□□□□□ -1.76
APL6	YGR261C	LPP1	Q04396	274 aa		4.04	□□□□□ -1.76
APL6	YGR261C	FIT1	Q04433	528 aa		4.04	□□□□□ -1.76
APL6	YGR261C	BNI1	P41832	1953 aa		4.04	□□□□□ -1.76
APL6	YGR261C	GEA1	P47102	1408 aa	Predicted RBP	4.04	□□□□□ -1.76
APL6	YGR261C	FYV4	P38783	130 aa	Predicted RBP	4.04	□□□□□ -1.76
APL6	YGR261C	TDA7	P53882	636 aa	Predicted RBP	4.04	□□□□□ -1.76
APL6	YGR261C	PCL9	Q12477	304 aa		4.04	□□□□□ -1.76
APL6	YGR261C	YBL008W-A	Q3E821	79 aa		4.04	□□□□□ -1.76
APL6	YGR261C	MTC6	P38849	526 aa		4.03	□□□□□ -1.76
APL6	YGR261C	SYS1	P41544	203 aa		4.03	□□□□□ -1.76
APL6	YGR261C	YFL019C	P43576	117 aa		4.03	□□□□□ -1.76
APL6	YGR261C	ROT1	Q03691	256 aa		4.03	□□□□□ -1.76
APL6	YGR261C	KSH1	Q8TGJ3	72 aa		4.03	□□□□□ -1.76
APL6	YGR261C	YCF1	P39109	1515 aa	Known RBP	4.03	□□□□□ -1.76
APL6	YGR261C	PDR15	Q04182	1529 aa	Known RBP	4.03	□□□□□ -1.76
APL6	YGR261C	TRP1	P00912	224 aa		4.03	□□□□□ -1.76
APL6	YGR261C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
APL6	YGR261C	GLC7	P32598	312 aa	Known RBP	4.03	□□□□□ -1.76
APL6	YGR261C	YFL065C	P43539	102 aa		4.03	□□□□□ -1.76
APL6	YGR261C	ANT1	Q06497	328 aa		4.03	□□□□□ -1.76
APL6	YGR261C	YPR203W	Q08994	102 aa		4.03	□□□□□ -1.76
APL6	YGR261C	ECM12	O13529	151 aa		4.02	□□□□□ -1.77
APL6	YGR261C	PEP1	P32319	1579 aa		4.02	□□□□□ -1.77
APL6	YGR261C	PAN1	P32521	1480 aa		4.02	□□□□□ -1.77
APL6	YGR261C	HTD2	P38790	280 aa	Known RBP	4.02	□□□□□ -1.77
APL6	YGR261C	CWP2	P43497	92 aa		4.02	□□□□□ -1.77
APL6	YGR261C	YMR181C	Q03231	154 aa		4.02	□□□□□ -1.77
APL6	YGR261C	AUS1	Q08409	1394 aa		4.02	□□□□□ -1.77
APL6	YGR261C	PAI3	P01094	68 aa		4.02	□□□□□ -1.77
APL6	YGR261C	DDR48	P18899	430 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms