RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C RRP17Q04031 235 aaPredicted RBP0.8□□□□□ -2.28
SWI4YER111C VPS68Q12016 184 aa0.8□□□□□ -2.28
SWI4YER111C MOT1P32333 1867 aa0.8□□□□□ -2.28
SWI4YER111C YCR023CP25351 611 aa0.8□□□□□ -2.28
SWI4YER111C STP22P25604 385 aa0.8□□□□□ -2.28
SWI4YER111C UBC6P33296 250 aaPredicted RBP0.8□□□□□ -2.28
SWI4YER111C TVP38P36164 337 aa0.8□□□□□ -2.28
SWI4YER111C YBR285WP38354 144 aa0.8□□□□□ -2.28
SWI4YER111C YHR022CP38763 256 aa0.8□□□□□ -2.28
SWI4YER111C NSG1P38837 291 aa0.8□□□□□ -2.28
SWI4YER111C YER134CP40081 178 aa0.8□□□□□ -2.28
SWI4YER111C RFC2P40348 353 aa0.8□□□□□ -2.28
SWI4YER111C TIR3P40552 269 aa0.8□□□□□ -2.28
SWI4YER111C ERJ5P43613 295 aaPredicted RBP0.8□□□□□ -2.28
SWI4YER111C SAY1P53324 424 aa0.8□□□□□ -2.28
SWI4YER111C MPA43P53583 542 aaPredicted RBP0.8□□□□□ -2.28
SWI4YER111C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
SWI4YER111C RDI1Q12434 202 aa0.8□□□□□ -2.28
SWI4YER111C KRE5P22023 1365 aa0.8□□□□□ -2.28
SWI4YER111C PBI2P0CT04 75 aaKnown RBP0.79□□□□□ -2.28
SWI4YER111C PET54P10834 293 aa0.79□□□□□ -2.28
SWI4YER111C OCH1P31755 480 aa0.79□□□□□ -2.28
SWI4YER111C ARO7P32178 256 aa0.79□□□□□ -2.28
SWI4YER111C PAM17P36147 197 aa0.79□□□□□ -2.28
SWI4YER111C MAK5P38112 773 aaPredicted RBP0.79□□□□□ -2.28
SWI4YER111C TDA4P47153 279 aa0.79□□□□□ -2.28
SWI4YER111C YGL193CP53097 103 aa0.79□□□□□ -2.28
SWI4YER111C YGL101WP53144 215 aa0.79□□□□□ -2.28
SWI4YER111C VPS28Q02767 242 aa0.79□□□□□ -2.28
SWI4YER111C YMR253CQ04835 414 aa0.79□□□□□ -2.28
SWI4YER111C YPR127WQ06494 345 aa0.79□□□□□ -2.28
SWI4YER111C YLR046CQ12253 270 aa0.79□□□□□ -2.28
SWI4YER111C DGK1Q12382 290 aa0.79□□□□□ -2.28
SWI4YER111C EMC6Q12431 108 aa0.79□□□□□ -2.28
SWI4YER111C MEI4P29467 408 aa0.79□□□□□ -2.28
SWI4YER111C FZF1P32805 299 aa0.79□□□□□ -2.28
SWI4YER111C PTC1P35182 281 aa0.79□□□□□ -2.28
SWI4YER111C SRP102P36057 244 aaPredicted RBP0.79□□□□□ -2.28
SWI4YER111C SOL1P50278 321 aa0.79□□□□□ -2.28
SWI4YER111C NSL1Q12143 216 aa0.79□□□□□ -2.28
SWI4YER111C YHR086W-AQ3E746 53 aa0.79□□□□□ -2.28
SWI4YER111C YER135CP40082 130 aa0.79□□□□□ -2.28
SWI4YER111C YFL019CP43576 117 aa0.79□□□□□ -2.28
SWI4YER111C SKI6P46948 246 aaPredicted RBP0.79□□□□□ -2.28
SWI4YER111C HHT1P61830 136 aa0.79□□□□□ -2.28
SWI4YER111C HSK3P69852 69 aa0.79□□□□□ -2.28
SWI4YER111C SHH3Q04487 196 aa0.79□□□□□ -2.28
SWI4YER111C GAL83Q04739 417 aa0.79□□□□□ -2.28
SWI4YER111C YPR202WQ08993 238 aa0.79□□□□□ -2.28
SWI4YER111C ODC2Q99297 307 aa0.79□□□□□ -2.28
SWI4YER111C ATG40Q99325 256 aa0.79□□□□□ -2.28
SWI4YER111C FLO9P39712 1322 aa0.78□□□□□ -2.28
SWI4YER111C YLR236CA0A023PZG4 107 aa0.78□□□□□ -2.28
SWI4YER111C RAD6P06104 172 aa0.78□□□□□ -2.28
SWI4YER111C RPL40AP0CH08 128 aaKnown RBP0.78□□□□□ -2.28
SWI4YER111C RPL40BP0CH09 128 aaKnown RBP0.78□□□□□ -2.28
SWI4YER111C SCL1P21243 252 aaKnown RBP0.78□□□□□ -2.28
SWI4YER111C KDX1P36005 433 aa0.78□□□□□ -2.28
SWI4YER111C YBR209WP38311 105 aa0.78□□□□□ -2.28
SWI4YER111C SPC25P40014 221 aa0.78□□□□□ -2.28
SWI4YER111C SPO73P40031 143 aa0.78□□□□□ -2.28
SWI4YER111C RIO2P40160 425 aaKnown RBP0.78□□□□□ -2.28
SWI4YER111C DAN1P47178 298 aa0.78□□□□□ -2.28
SWI4YER111C DOC1P53068 250 aa0.78□□□□□ -2.28
SWI4YER111C IRC23Q08416 157 aa0.78□□□□□ -2.28
SWI4YER111C RAD28Q12021 506 aa0.78□□□□□ -2.28
SWI4YER111C DAS2Q12084 232 aa0.78□□□□□ -2.28
SWI4YER111C RPL2AP0CX45 254 aaKnown RBP0.78□□□□□ -2.28
SWI4YER111C RPL2BP0CX46 254 aaKnown RBP0.78□□□□□ -2.28
SWI4YER111C TIR1P10863 254 aa0.78□□□□□ -2.28
SWI4YER111C SPO13P23624 291 aa0.78□□□□□ -2.28
SWI4YER111C CPR5P35176 225 aa0.78□□□□□ -2.28
SWI4YER111C CSH1P38287 376 aa0.78□□□□□ -2.28
SWI4YER111C NSA2P40078 261 aaKnown RBP0.78□□□□□ -2.28
SWI4YER111C NQM1P53228 333 aaPredicted RBP0.78□□□□□ -2.28
SWI4YER111C GRX5Q02784 150 aa0.78□□□□□ -2.28
SWI4YER111C THI74Q04083 370 aa0.78□□□□□ -2.28
SWI4YER111C HRD1Q08109 551 aa0.78□□□□□ -2.28
SWI4YER111C PIR1Q03178 341 aa0.77□□□□□ -2.29
SWI4YER111C RAV2Q03956 351 aa0.77□□□□□ -2.29
SWI4YER111C CUE4Q04201 117 aaPredicted RBP0.77□□□□□ -2.29
SWI4YER111C NAT3Q06504 195 aa0.77□□□□□ -2.29
SWI4YER111C FSF1Q12029 327 aaKnown RBP0.77□□□□□ -2.29
SWI4YER111C YLR412C-AQ3E742 68 aa0.77□□□□□ -2.29
SWI4YER111C SLM6P38343 150 aa0.77□□□□□ -2.29
SWI4YER111C YPL073CP40323 161 aa0.77□□□□□ -2.29
SWI4YER111C BOL2P53082 120 aa0.77□□□□□ -2.29
SWI4YER111C MPC3P53311 146 aa0.77□□□□□ -2.29
SWI4YER111C YPR013CQ12145 317 aa0.77□□□□□ -2.29
SWI4YER111C YDL180WQ12301 547 aa0.77□□□□□ -2.29
SWI4YER111C MSB2P32334 1306 aa0.77□□□□□ -2.29
SWI4YER111C MDH2P22133 377 aa0.77□□□□□ -2.29
SWI4YER111C YBR220CP38318 560 aa0.77□□□□□ -2.29
SWI4YER111C GAA1P39012 614 aa0.77□□□□□ -2.29
SWI4YER111C LSM1P47017 172 aaKnown RBP0.77□□□□□ -2.29
SWI4YER111C YJR015WP47090 510 aa0.77□□□□□ -2.29
SWI4YER111C TTI2P47168 421 aa0.77□□□□□ -2.29
SWI4YER111C LSM3P57743 89 aaKnown RBP0.77□□□□□ -2.29
SWI4YER111C YKR005CQ02203 525 aa0.77□□□□□ -2.29
SWI4YER111C YDR391CQ04170 232 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 246 ms