RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W CDC7P06243 507 aa1.51□□□□□ -2.17
SSF2YDR312W MGT1P26188 188 aa1.51□□□□□ -2.17
SSF2YDR312W SEC17P32602 292 aa1.51□□□□□ -2.17
SSF2YDR312W CLG1P35190 452 aa1.51□□□□□ -2.17
SSF2YDR312W YRA2P36036 203 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
SSF2YDR312W SHE2P36068 246 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
SSF2YDR312W DSE2P38844 325 aa1.51□□□□□ -2.17
SSF2YDR312W AIM2P39721 246 aa1.51□□□□□ -2.17
SSF2YDR312W VTC1P40046 129 aaRIP-Chip data1.51□□□□□ -2.17not detected
SSF2YDR312W PEP8P40335 379 aa1.51□□□□□ -2.17
SSF2YDR312W RPL33BP41056 107 aaKnown RBP1.51□□□□□ -2.17
SSF2YDR312W AIF1P52923 378 aa1.51□□□□□ -2.17
SSF2YDR312W YNR062CP53748 327 aa1.51□□□□□ -2.17
SSF2YDR312W LSM7P53905 115 aaKnown RBP1.51□□□□□ -2.17
SSF2YDR312W YNL140CP53910 189 aa1.51□□□□□ -2.17
SSF2YDR312W COG5P53951 403 aa1.51□□□□□ -2.17
SSF2YDR312W BUD25P85052 153 aa1.51□□□□□ -2.17
SSF2YDR312W MET31Q03081 177 aa1.51□□□□□ -2.17
SSF2YDR312W DAS2Q12084 232 aa1.51□□□□□ -2.17
SSF2YDR312W TDA8Q6B2U8 126 aa1.51□□□□□ -2.17
SSF2YDR312W HTB1P02293 131 aaKnown RBP1.5□□□□□ -2.17
SSF2YDR312W HTB2P02294 131 aa1.5□□□□□ -2.17
SSF2YDR312W RPL27AP0C2H6 136 aaKnown RBP1.5□□□□□ -2.17
SSF2YDR312W RPL27BP0C2H7 136 aaKnown RBP1.5□□□□□ -2.17
SSF2YDR312W YLR156WP0CE96 114 aa1.5□□□□□ -2.17
SSF2YDR312W YLR159WP0CE97 114 aa1.5□□□□□ -2.17
SSF2YDR312W YLR161WP0CE98 114 aa1.5□□□□□ -2.17
SSF2YDR312W DDI2P0CH63 225 aa1.5□□□□□ -2.17
SSF2YDR312W DDI3P0CH64 225 aa1.5□□□□□ -2.17
SSF2YDR312W KSS1P14681 368 aa1.5□□□□□ -2.17
SSF2YDR312W PET9P18239 318 aaKnown RBP1.5□□□□□ -2.17
SSF2YDR312W YHR022CP38763 256 aa1.5□□□□□ -2.17
SSF2YDR312W YRB2P40517 327 aa1.5□□□□□ -2.17
SSF2YDR312W TIR3P40552 269 aa1.5□□□□□ -2.17
SSF2YDR312W YJL027CP47063 138 aaPredicted RBP1.5□□□□□ -2.17
SSF2YDR312W RPS12P48589 143 aaKnown RBP1.5□□□□□ -2.17
SSF2YDR312W GRX3Q03835 250 aa1.5□□□□□ -2.17
SSF2YDR312W CSN9Q03981 162 aa1.5□□□□□ -2.17
SSF2YDR312W MHF1Q3E835 90 aa1.5□□□□□ -2.17
SSF2YDR312W YCL012CQ8J0M4 134 aa1.5□□□□□ -2.17
SSF2YDR312W RAS2P01120 322 aaKnown RBP1.49□□□□□ -2.17
SSF2YDR312W PHO13P19881 312 aa1.49□□□□□ -2.17
SSF2YDR312W BET1P22804 142 aa1.49□□□□□ -2.17
SSF2YDR312W RFA3P26755 122 aaKnown RBP1.49□□□□□ -2.17
SSF2YDR312W AUA1P32450 94 aa1.49□□□□□ -2.17
SSF2YDR312W FCY21P40039 528 aa1.49□□□□□ -2.17
SSF2YDR312W BMT5P40493 336 aa1.49□□□□□ -2.17
SSF2YDR312W DOC1P53068 250 aa1.49□□□□□ -2.17
SSF2YDR312W EFM5P53200 248 aaKnown RBP1.49□□□□□ -2.17
SSF2YDR312W YGR050CP53231 118 aa1.49□□□□□ -2.17
SSF2YDR312W HPT1Q04178 221 aaKnown RBP1.49□□□□□ -2.17
SSF2YDR312W PRP11Q07350 266 aaPredicted RBP1.49□□□□□ -2.17
SSF2YDR312W FIT3Q08907 204 aa1.49□□□□□ -2.17
SSF2YDR312W YMR030W-AQ3E760 96 aa1.49□□□□□ -2.17
SSF2YDR312W TIM9O74700 87 aa1.48□□□□□ -2.17
SSF2YDR312W GPA2P10823 449 aa1.48□□□□□ -2.17
SSF2YDR312W RPB3P16370 318 aaKnown RBP1.48□□□□□ -2.17
SSF2YDR312W CKS1P20486 150 aaKnown RBP1.48□□□□□ -2.17
SSF2YDR312W RPS1AP33442 255 aaKnown RBP1.48□□□□□ -2.17
SSF2YDR312W MRPL17P36528 281 aa1.48□□□□□ -2.17
SSF2YDR312W YNL217WP40152 326 aa1.48□□□□□ -2.17
SSF2YDR312W GVP36P40531 326 aaKnown RBP1.48□□□□□ -2.17
SSF2YDR312W FMP32P43557 207 aa1.48□□□□□ -2.17
SSF2YDR312W YNR064CP53750 290 aa1.48□□□□□ -2.17
SSF2YDR312W FSF1Q12029 327 aaKnown RBP1.48□□□□□ -2.17
SSF2YDR312W MCP1Q12106 302 aa1.48□□□□□ -2.17
SSF2YDR312W YHR086W-AQ3E746 53 aa1.48□□□□□ -2.17
SSF2YDR312W CMD1P06787 147 aaKnown RBP1.47□□□□□ -2.17
SSF2YDR312W MER1P16523 270 aa1.47□□□□□ -2.17
SSF2YDR312W CBF1P17106 351 aa1.47□□□□□ -2.17
SSF2YDR312W YCR090CP25654 182 aaKnown RBP1.47□□□□□ -2.17
SSF2YDR312W TFC1P32367 649 aa1.47□□□□□ -2.17
SSF2YDR312W YBR209WP38311 105 aa1.47□□□□□ -2.17
SSF2YDR312W YBR285WP38354 144 aa1.47□□□□□ -2.17
SSF2YDR312W FIP1P45976 327 aa1.47□□□□□ -2.17
SSF2YDR312W GIM3P53900 129 aa1.47□□□□□ -2.17
SSF2YDR312W CYT2Q00873 224 aa1.47□□□□□ -2.17
SSF2YDR312W GGA1Q06336 557 aa1.47□□□□□ -2.17
SSF2YDR312W YNG1Q08465 219 aa1.47□□□□□ -2.17
SSF2YDR312W RIO1Q12196 484 aaKnown RBP1.47□□□□□ -2.17
SSF2YDR312W YDL085C-AQ3E7B7 68 aaKnown RBP1.47□□□□□ -2.17
SSF2YDR312W QCR7P00128 127 aa1.47□□□□□ -2.17
SSF2YDR312W RPL39P04650 51 aa1.47□□□□□ -2.17
SSF2YDR312W YPK2P18961 677 aa1.47□□□□□ -2.17
SSF2YDR312W CNB1P25296 175 aa1.47□□□□□ -2.17
SSF2YDR312W ASF2P32448 525 aaPredicted RBP1.47□□□□□ -2.17
SSF2YDR312W TMA19P35691 167 aaKnown RBP1.47□□□□□ -2.17
SSF2YDR312W YER135CP40082 130 aa1.47□□□□□ -2.17
SSF2YDR312W MMS2P53152 137 aa1.47□□□□□ -2.17
SSF2YDR312W GEP7P53171 287 aa1.47□□□□□ -2.17
SSF2YDR312W SAY1P53324 424 aa1.47□□□□□ -2.17
SSF2YDR312W FMN1Q03778 218 aa1.47□□□□□ -2.17
SSF2YDR312W YET3Q07451 203 aa1.47□□□□□ -2.17
SSF2YDR312W YLR031WQ07978 186 aa1.47□□□□□ -2.17
SSF2YDR312W YPL162CQ12042 273 aa1.47□□□□□ -2.17
SSF2YDR312W YHR214C-EQ8TGK0 99 aa1.47□□□□□ -2.17
SSF2YDR312W ATG40Q99325 256 aa1.47□□□□□ -2.17
SSF2YDR312W UTP30P36144 274 aaKnown RBP1.46□□□□□ -2.18
SSF2YDR312W BAT2P47176 376 aaKnown RBP1.46□□□□□ -2.18
SSF2YDR312W HNT1Q04344 158 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 109.9 ms