RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W YLR412C-AQ3E742 68 aa3.72□□□□□ -1.81
SSB1YDL229W SCS22Q6Q595 175 aa3.72□□□□□ -1.81
SSB1YDL229W ECM29P38737 1868 aa3.71□□□□□ -1.82
SSB1YDL229W COX5AP00424 153 aa3.71□□□□□ -1.82
SSB1YDL229W KRE1P17260 313 aa3.71□□□□□ -1.82
SSB1YDL229W YCR085WP25650 117 aa3.71□□□□□ -1.82
SSB1YDL229W PAM17P36147 197 aa3.71□□□□□ -1.82
SSB1YDL229W YBL081WP38180 368 aaKnown RBP3.71□□□□□ -1.82
SSB1YDL229W YJL193WP39542 402 aa3.71□□□□□ -1.82
SSB1YDL229W HMF1P40037 129 aaKnown RBP3.71□□□□□ -1.82
SSB1YDL229W RRT5P43607 289 aa3.71□□□□□ -1.82
SSB1YDL229W ADD37Q03233 198 aa3.71□□□□□ -1.82
SSB1YDL229W ENB1Q08299 606 aa3.71□□□□□ -1.82
SSB1YDL229W YPL162CQ12042 273 aa3.71□□□□□ -1.82
SSB1YDL229W YPR071WQ12346 211 aa3.71□□□□□ -1.82
SSB1YDL229W YPR015CQ12531 247 aa3.71□□□□□ -1.82
SSB1YDL229W YMR030W-AQ3E760 96 aa3.71□□□□□ -1.82
SSB1YDL229W MHF2Q3E829 80 aa3.71□□□□□ -1.82
SSB1YDL229W RPS13P05756 151 aaKnown RBP3.7□□□□□ -1.82
SSB1YDL229W PBI2P0CT04 75 aaKnown RBP3.7□□□□□ -1.82
SSB1YDL229W URA5P13298 226 aaKnown RBP3.7□□□□□ -1.82
SSB1YDL229W YCR090CP25654 182 aaKnown RBP3.7□□□□□ -1.82
SSB1YDL229W AUR1P36107 401 aaPredicted RBP3.7□□□□□ -1.82
SSB1YDL229W YBR063CP38083 404 aa3.7□□□□□ -1.82
SSB1YDL229W UMP1P38293 148 aa3.7□□□□□ -1.82
SSB1YDL229W HSP10P38910 106 aa3.7□□□□□ -1.82
SSB1YDL229W YAR029WP39549 74 aa3.7□□□□□ -1.82
SSB1YDL229W CTK2P46962 323 aa3.7□□□□□ -1.82
SSB1YDL229W YGL262WP53054 175 aa3.7□□□□□ -1.82
SSB1YDL229W TAM41P53230 385 aa3.7□□□□□ -1.82
SSB1YDL229W BUD25P85052 153 aa3.7□□□□□ -1.82
SSB1YDL229W UTP15Q04305 513 aaKnown RBP3.7□□□□□ -1.82
SSB1YDL229W YDR119W-AQ2V2P9 66 aa3.7□□□□□ -1.82
SSB1YDL229W ENV10Q99382 181 aa3.7□□□□□ -1.82
SSB1YDL229W UBR2Q07963 1872 aa3.7□□□□□ -1.82
SSB1YDL229W MSB2P32334 1306 aa3.7□□□□□ -1.82
SSB1YDL229W SPL2P38839 148 aa3.7□□□□□ -1.82
SSB1YDL229W MID1P41821 548 aa3.7□□□□□ -1.82
SSB1YDL229W YFL012WP43580 148 aa3.7□□□□□ -1.82
SSB1YDL229W UBC9P50623 157 aaPredicted RBP3.7□□□□□ -1.82
SSB1YDL229W ALG9P53868 555 aaKnown RBP3.7□□□□□ -1.82
SSB1YDL229W YMR317WQ04893 1140 aa3.7□□□□□ -1.82
SSB1YDL229W STP4Q07351 490 aa3.7□□□□□ -1.82
SSB1YDL229W ATO3Q12359 275 aa3.7□□□□□ -1.82
SSB1YDL229W YPL247CQ12523 523 aa3.7□□□□□ -1.82
SSB1YDL229W KSH1Q8TGJ3 72 aa3.7□□□□□ -1.82
SSB1YDL229W SEC11P15367 167 aa3.69□□□□□ -1.82
SSB1YDL229W YHR140WP38842 239 aa3.69□□□□□ -1.82
SSB1YDL229W YPL073CP40323 161 aa3.69□□□□□ -1.82
SSB1YDL229W PHS1P40857 217 aa3.69□□□□□ -1.82
SSB1YDL229W MTR3P48240 250 aaPredicted RBP3.69□□□□□ -1.82
SSB1YDL229W CAX4P53223 239 aa3.69□□□□□ -1.82
SSB1YDL229W CSL4P53859 292 aaPredicted RBP3.69□□□□□ -1.82
SSB1YDL229W GPI19Q04082 140 aa3.69□□□□□ -1.82
SSB1YDL229W YMR087WQ04299 284 aa3.69□□□□□ -1.82
SSB1YDL229W YMR090WQ04304 227 aaKnown RBP3.69□□□□□ -1.82
SSB1YDL229W YPL264CQ08980 353 aa3.69□□□□□ -1.82
SSB1YDL229W IGO2Q9P305 131 aa3.69□□□□□ -1.82
SSB1YDL229W LAA1P39526 2014 aa3.69□□□□□ -1.82
SSB1YDL229W MRS3P10566 314 aa3.68□□□□□ -1.82
SSB1YDL229W YCR050CP25630 102 aa3.68□□□□□ -1.82
SSB1YDL229W YIH1P25637 258 aa3.68□□□□□ -1.82
SSB1YDL229W PRO1P32264 428 aa3.68□□□□□ -1.82
SSB1YDL229W RIM1P32445 135 aaKnown RBP3.68□□□□□ -1.82
SSB1YDL229W PHO88P38264 188 aaPredicted RBP3.68□□□□□ -1.82
SSB1YDL229W HST4P53688 370 aa3.68□□□□□ -1.82
SSB1YDL229W TDA7P53882 636 aaPredicted RBP3.68□□□□□ -1.82
SSB1YDL229W ROT1Q03691 256 aa3.68□□□□□ -1.82
SSB1YDL229W RRT7Q07829 113 aa3.68□□□□□ -1.82
SSB1YDL229W MSA1Q08471 629 aa3.68□□□□□ -1.82
SSB1YDL229W YKL018C-AQ3E7A7 99 aa3.68□□□□□ -1.82
SSB1YDL229W HKR1P41809 1802 aa3.68□□□□□ -1.82
SSB1YDL229W DIF1O13577 133 aa3.67□□□□□ -1.82
SSB1YDL229W YLL053CP0CD98 152 aa3.67□□□□□ -1.82
SSB1YDL229W YEL076C-AP0CX16 216 aa3.67□□□□□ -1.82
SSB1YDL229W YLR464WP0CX17 216 aa3.67□□□□□ -1.82
SSB1YDL229W RPL20AP0CX23 172 aaKnown RBP3.67□□□□□ -1.82
SSB1YDL229W RPL20BP0CX24 172 aaPredicted RBP3.67□□□□□ -1.82
SSB1YDL229W PUB1P32588 453 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SSB1YDL229W RPL14AP36105 138 aaKnown RBP3.67□□□□□ -1.82
SSB1YDL229W YEL076CP39971 216 aa3.67□□□□□ -1.82
SSB1YDL229W MPM1P40364 252 aa3.67□□□□□ -1.82
SSB1YDL229W IST3P40565 148 aaPredicted RBP3.67□□□□□ -1.82
SSB1YDL229W TIS11P47977 285 aa3.67□□□□□ -1.82
SSB1YDL229W SUT1P53032 299 aaKnown RBP3.67□□□□□ -1.82
SSB1YDL229W RAF1Q06891 181 aa3.67□□□□□ -1.82
SSB1YDL229W RPB7P34087 171 aa3.67□□□□□ -1.82
SSB1YDL229W MBB1P39534 108 aa3.67□□□□□ -1.82
SSB1YDL229W LSM3P57743 89 aaKnown RBP3.67□□□□□ -1.82
SSB1YDL229W YMR252CQ04814 134 aa3.67□□□□□ -1.82
SSB1YDL229W YLR281CQ05863 155 aa3.67□□□□□ -1.82
SSB1YDL229W YDL057WQ07379 328 aa3.67□□□□□ -1.82
SSB1YDL229W GAT3Q07928 141 aa3.67□□□□□ -1.82
SSB1YDL229W IES4Q08561 116 aa3.67□□□□□ -1.82
SSB1YDL229W RLM1Q12224 676 aa3.67□□□□□ -1.82
SSB1YDL229W YPR064WQ12492 139 aa3.67□□□□□ -1.82
SSB1YDL229W TRP1P00912 224 aa3.66□□□□□ -1.82
SSB1YDL229W HEM4P06174 275 aa3.66□□□□□ -1.82
SSB1YDL229W YGL010WP25338 174 aa3.66□□□□□ -1.82
SSB1YDL229W CNE1P27825 502 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms