RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C VPS71Q03433 280 aa1.6□□□□□ -2.15
PRP6YBR055C YLR046CQ12253 270 aa1.6□□□□□ -2.15
PRP6YBR055C YDL180WQ12301 547 aa1.6□□□□□ -2.15
PRP6YBR055C ODC2Q99297 307 aa1.6□□□□□ -2.15
PRP6YBR055C POR1P04840 283 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C RPL26AP05743 127 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C IDP1P21954 428 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C SNC2P33328 115 aa1.6□□□□□ -2.15
PRP6YBR055C SFK1P35735 353 aa1.6□□□□□ -2.15
PRP6YBR055C CIS3P47001 227 aa1.6□□□□□ -2.15
PRP6YBR055C RPL26BP53221 127 aaKnown RBP1.6□□□□□ -2.15
PRP6YBR055C FYV12Q08559 129 aa1.6□□□□□ -2.15
PRP6YBR055C YLR412C-AQ3E742 68 aa1.6□□□□□ -2.15
PRP6YBR055C UPS2P35200 230 aa1.59□□□□□ -2.15
PRP6YBR055C YBR285WP38354 144 aa1.59□□□□□ -2.15
PRP6YBR055C RPL33BP41056 107 aaKnown RBP1.59□□□□□ -2.15
PRP6YBR055C ERJ5P43613 295 aaPredicted RBP1.59□□□□□ -2.15
PRP6YBR055C SBH1P52870 82 aa1.59□□□□□ -2.15
PRP6YBR055C ORM1P53224 222 aa1.59□□□□□ -2.15
PRP6YBR055C HHT1P61830 136 aa1.59□□□□□ -2.15
PRP6YBR055C IPI1P38803 334 aaPredicted RBP1.59□□□□□ -2.16
PRP6YBR055C CYC2P38909 366 aa1.59□□□□□ -2.16
PRP6YBR055C YJR015WP47090 510 aa1.59□□□□□ -2.16
PRP6YBR055C XPT1P47165 209 aa1.59□□□□□ -2.16
PRP6YBR055C YGL204CP53089 101 aa1.59□□□□□ -2.16
PRP6YBR055C YNR077CP53758 84 aa1.59□□□□□ -2.16
PRP6YBR055C DIG2Q03373 323 aaKnown RBP1.59□□□□□ -2.16
PRP6YBR055C PKR1Q03880 122 aaKnown RBP1.59□□□□□ -2.16
PRP6YBR055C RAV2Q03956 351 aa1.59□□□□□ -2.16
PRP6YBR055C YDL012CQ12489 107 aa1.59□□□□□ -2.16
PRP6YBR055C CPR5P35176 225 aa1.58□□□□□ -2.16
PRP6YBR055C YET1P35723 206 aa1.58□□□□□ -2.16
PRP6YBR055C APQ12P40532 138 aa1.58□□□□□ -2.16
PRP6YBR055C YJL027CP47063 138 aaPredicted RBP1.58□□□□□ -2.16
PRP6YBR055C DOC1P53068 250 aa1.58□□□□□ -2.16
PRP6YBR055C YGR042WP53227 271 aa1.58□□□□□ -2.16
PRP6YBR055C PRM7Q12459 698 aa1.58□□□□□ -2.16
PRP6YBR055C RPL30P14120 105 aaKnown RBP1.58□□□□□ -2.16
PRP6YBR055C NUF2P33895 451 aa1.58□□□□□ -2.16
PRP6YBR055C MPC3P53311 146 aa1.58□□□□□ -2.16
PRP6YBR055C YMR295CQ03559 197 aa1.58□□□□□ -2.16
PRP6YBR055C MRPS8Q03799 155 aa1.58□□□□□ -2.16
PRP6YBR055C PMD1P32634 1753 aa1.58□□□□□ -2.16
PRP6YBR055C LYS2P07702 1392 aa1.57□□□□□ -2.16
PRP6YBR055C YGR201CP42936 225 aa1.57□□□□□ -2.16
PRP6YBR055C TIM13P53299 105 aa1.57□□□□□ -2.16
PRP6YBR055C YNR062CP53748 327 aa1.57□□□□□ -2.16
PRP6YBR055C GAL83Q04739 417 aa1.57□□□□□ -2.16
PRP6YBR055C SDH4P37298 181 aa1.57□□□□□ -2.16
PRP6YBR055C TVP23P38962 199 aa1.57□□□□□ -2.16
PRP6YBR055C CUP9P41817 306 aa1.57□□□□□ -2.16
PRP6YBR055C FSF1Q12029 327 aaKnown RBP1.57□□□□□ -2.16
PRP6YBR055C STP22P25604 385 aa1.56□□□□□ -2.16
PRP6YBR055C ERV15P38312 142 aa1.56□□□□□ -2.16
PRP6YBR055C SPC25P40014 221 aa1.56□□□□□ -2.16
PRP6YBR055C DLS1P40366 167 aa1.56□□□□□ -2.16
PRP6YBR055C VPS28Q02767 242 aa1.56□□□□□ -2.16
PRP6YBR055C YMR253CQ04835 414 aa1.56□□□□□ -2.16
PRP6YBR055C YOR214CQ12282 236 aa1.56□□□□□ -2.16
PRP6YBR055C MLP1Q02455 1875 aaKnown RBP1.56□□□□□ -2.16
PRP6YBR055C YPR096CO13587 100 aa1.56□□□□□ -2.16
PRP6YBR055C TIR1P10863 254 aa1.56□□□□□ -2.16
PRP6YBR055C BOL2P53082 120 aa1.56□□□□□ -2.16
PRP6YBR055C VPS68Q12016 184 aa1.56□□□□□ -2.16
PRP6YBR055C ATP5P09457 212 aa1.55□□□□□ -2.16
PRP6YBR055C PEX4P29340 183 aa1.55□□□□□ -2.16
PRP6YBR055C FZF1P32805 299 aa1.55□□□□□ -2.16
PRP6YBR055C PTC1P35182 281 aa1.55□□□□□ -2.16
PRP6YBR055C PAM17P36147 197 aa1.55□□□□□ -2.16
PRP6YBR055C FYV4P38783 130 aaPredicted RBP1.55□□□□□ -2.16
PRP6YBR055C NSA2P40078 261 aaKnown RBP1.55□□□□□ -2.16
PRP6YBR055C TIR3P40552 269 aa1.55□□□□□ -2.16
PRP6YBR055C GLR1P41921 483 aaKnown RBP1.55□□□□□ -2.16
PRP6YBR055C YJL144WP47009 104 aa1.55□□□□□ -2.16
PRP6YBR055C MIX17Q03667 156 aa1.55□□□□□ -2.16
PRP6YBR055C SHH3Q04487 196 aa1.55□□□□□ -2.16
PRP6YBR055C ATG40Q99325 256 aa1.55□□□□□ -2.16
PRP6YBR055C RPO41P13433 1351 aaKnown RBP1.55□□□□□ -2.16
PRP6YBR055C YBR220CP38318 560 aa1.55□□□□□ -2.16
PRP6YBR055C YGL193CP53097 103 aa1.55□□□□□ -2.16
PRP6YBR055C DUR1,2P32528 1835 aaKnown RBP1.55□□□□□ -2.16
PRP6YBR055C PHO88P38264 188 aaPredicted RBP1.54□□□□□ -2.16
PRP6YBR055C SPO73P40031 143 aa1.54□□□□□ -2.16
PRP6YBR055C YNL217WP40152 326 aa1.54□□□□□ -2.16
PRP6YBR055C YNL200CP40165 246 aaKnown RBP1.54□□□□□ -2.16
PRP6YBR055C FIP1P45976 327 aa1.54□□□□□ -2.16
PRP6YBR055C YKR005CQ02203 525 aa1.54□□□□□ -2.16
PRP6YBR055C IRC23Q08416 157 aa1.54□□□□□ -2.16
PRP6YBR055C ATP20Q12233 115 aa1.54□□□□□ -2.16
PRP6YBR055C RIB3Q99258 208 aa1.54□□□□□ -2.16
PRP6YBR055C YOR062CP36025 268 aa1.54□□□□□ -2.16
PRP6YBR055C YPL073CP40323 161 aa1.54□□□□□ -2.16
PRP6YBR055C RBL2P48606 106 aaKnown RBP1.54□□□□□ -2.16
PRP6YBR055C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
PRP6YBR055C FLO1P32768 1537 aa1.54□□□□□ -2.16
PRP6YBR055C RAD6P06104 172 aa1.53□□□□□ -2.16
PRP6YBR055C CLB6P32943 380 aa1.53□□□□□ -2.16
PRP6YBR055C SHE2P36068 246 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
PRP6YBR055C YFR054CP43622 192 aa1.53□□□□□ -2.16
PRP6YBR055C YMR320WQ04897 101 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms