RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C PGA1P53896 198 aa6.27□□□□□ -1.41
CCR4YAL021C NRG1Q03125 231 aa6.27□□□□□ -1.41
CCR4YAL021C SDC1Q03323 175 aa6.27□□□□□ -1.41
CCR4YAL021C YMR310CQ04867 317 aaPredicted RBP6.27□□□□□ -1.41
CCR4YAL021C ARC18Q05933 178 aaKnown RBP6.27□□□□□ -1.41
CCR4YAL021C PEX11Q12462 236 aa6.27□□□□□ -1.41
CCR4YAL021C YCR085WP25650 117 aa6.26□□□□□ -1.41
CCR4YAL021C RPB11P38902 120 aa6.26□□□□□ -1.41
CCR4YAL021C YPL039WQ03080 316 aa6.26□□□□□ -1.41
CCR4YAL021C FCY1Q12178 158 aa6.26□□□□□ -1.41
CCR4YAL021C RPL2AP0CX45 254 aaKnown RBP6.26□□□□□ -1.41
CCR4YAL021C RPL2BP0CX46 254 aaKnown RBP6.26□□□□□ -1.41
CCR4YAL021C KRE1P17260 313 aa6.26□□□□□ -1.41
CCR4YAL021C TRX3P25372 127 aa6.26□□□□□ -1.41
CCR4YAL021C PEX22P39718 180 aa6.26□□□□□ -1.41
CCR4YAL021C YDR119W-AQ2V2P9 66 aa6.26□□□□□ -1.41
CCR4YAL021C MST28P39552 234 aa6.25□□□□□ -1.41
CCR4YAL021C CUP9P41817 306 aa6.25□□□□□ -1.41
CCR4YAL021C BAT2P47176 376 aaKnown RBP6.25□□□□□ -1.41
CCR4YAL021C GLO1P50107 326 aa6.25□□□□□ -1.41
CCR4YAL021C STP4Q07351 490 aa6.25□□□□□ -1.41
CCR4YAL021C KTI11Q3E840 82 aa6.25□□□□□ -1.41
CCR4YAL021C STT4P37297 1900 aa6.25□□□□□ -1.41
CCR4YAL021C RPS13P05756 151 aaKnown RBP6.25□□□□□ -1.41
CCR4YAL021C MID2P36027 376 aa6.25□□□□□ -1.41
CCR4YAL021C SHE1P38200 338 aa6.25□□□□□ -1.41
CCR4YAL021C ECM14P38836 430 aa6.25□□□□□ -1.41
CCR4YAL021C FLO5P38894 1075 aa6.25□□□□□ -1.41
CCR4YAL021C VEL1P53058 206 aa6.25□□□□□ -1.41
CCR4YAL021C BRR6P53062 197 aa6.25□□□□□ -1.41
CCR4YAL021C YNR071CP53757 342 aa6.25□□□□□ -1.41
CCR4YAL021C SPO24Q3E752 67 aa6.25□□□□□ -1.41
CCR4YAL021C ENV10Q99382 181 aa6.25□□□□□ -1.41
CCR4YAL021C MDM10P18409 493 aa6.24□□□□□ -1.41
CCR4YAL021C MAK31P23059 88 aa6.24□□□□□ -1.41
CCR4YAL021C RPL14AP36105 138 aaKnown RBP6.24□□□□□ -1.41
CCR4YAL021C ALG9P53868 555 aaKnown RBP6.24□□□□□ -1.41
CCR4YAL021C BUD25P85052 153 aa6.24□□□□□ -1.41
CCR4YAL021C MRX11Q03079 207 aa6.24□□□□□ -1.41
CCR4YAL021C RPC11Q04307 110 aaPredicted RBP6.24□□□□□ -1.41
CCR4YAL021C BOL1Q3E793 110 aa6.24□□□□□ -1.41
CCR4YAL021C MSB2P32334 1306 aa6.24□□□□□ -1.41
CCR4YAL021C SLM3Q12093 417 aa6.24□□□□□ -1.41
CCR4YAL021C PMD1P32634 1753 aa6.23□□□□□ -1.41
CCR4YAL021C RPL18AP0CX49 186 aaKnown RBP6.23□□□□□ -1.41
CCR4YAL021C RPL18BP0CX50 186 aaKnown RBP6.23□□□□□ -1.41
CCR4YAL021C PAM17P36147 197 aa6.23□□□□□ -1.41
CCR4YAL021C PHO88P38264 188 aaPredicted RBP6.23□□□□□ -1.41
CCR4YAL021C YEA4P40004 342 aa6.23□□□□□ -1.41
CCR4YAL021C VPS71Q03433 280 aa6.23□□□□□ -1.41
CCR4YAL021C YMR252CQ04814 134 aa6.23□□□□□ -1.41
CCR4YAL021C YLR346CQ06139 101 aa6.23□□□□□ -1.41
CCR4YAL021C YOR097CQ12274 175 aaPredicted RBP6.23□□□□□ -1.41
CCR4YAL021C MKK1P32490 508 aa6.23□□□□□ -1.41
CCR4YAL021C YMR090WQ04304 227 aaKnown RBP6.23□□□□□ -1.41
CCR4YAL021C YCR024C-BQ3E7Z8 88 aa6.23□□□□□ -1.41
CCR4YAL021C YLR146W-AQ2V2P1 62 aa6.22□□□□□ -1.41
CCR4YAL021C YLR412C-AQ3E742 68 aa6.22□□□□□ -1.41
CCR4YAL021C RPS21BQ3E754 87 aaKnown RBP6.22□□□□□ -1.41
CCR4YAL021C RPL28P02406 149 aaKnown RBP6.22□□□□□ -1.41
CCR4YAL021C ASM4Q05166 528 aa6.22□□□□□ -1.41
CCR4YAL021C YNL277W-AQ3E7Z0 62 aa6.22□□□□□ -1.41
CCR4YAL021C DAT1P13483 248 aaKnown RBP6.21□□□□□ -1.42
CCR4YAL021C YGL010WP25338 174 aa6.21□□□□□ -1.42
CCR4YAL021C GPI19Q04082 140 aa6.21□□□□□ -1.42
CCR4YAL021C MET32Q12041 191 aa6.21□□□□□ -1.42
CCR4YAL021C YPS3Q12303 508 aa6.21□□□□□ -1.42
CCR4YAL021C COX5AP00424 153 aa6.21□□□□□ -1.42
CCR4YAL021C TFS1P14306 219 aa6.21□□□□□ -1.42
CCR4YAL021C PUB1P32588 453 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42 RIP-Chip
CCR4YAL021C YAR029WP39549 74 aa6.21□□□□□ -1.42
CCR4YAL021C CAX4P53223 239 aa6.21□□□□□ -1.42
CCR4YAL021C YPL264CQ08980 353 aa6.21□□□□□ -1.42
CCR4YAL021C RPB7P34087 171 aa6.2□□□□□ -1.42
CCR4YAL021C YOR387CQ08910 206 aa6.2□□□□□ -1.42
CCR4YAL021C ARC40P38328 384 aaKnown RBP6.2□□□□□ -1.42
CCR4YAL021C RRT5P43607 289 aa6.2□□□□□ -1.42
CCR4YAL021C CTK2P46962 323 aa6.2□□□□□ -1.42
CCR4YAL021C KSH1Q8TGJ3 72 aa6.2□□□□□ -1.42
CCR4YAL021C YCR050CP25630 102 aa6.19□□□□□ -1.42
CCR4YAL021C YCR090CP25654 182 aaKnown RBP6.19□□□□□ -1.42
CCR4YAL021C HMF1P40037 129 aaKnown RBP6.19□□□□□ -1.42
CCR4YAL021C MIC27P50945 234 aa6.19□□□□□ -1.42
CCR4YAL021C MSA1Q08471 629 aa6.19□□□□□ -1.42
CCR4YAL021C YAL063C-AQ3E791 96 aa6.19□□□□□ -1.42
CCR4YAL021C RNQ1P25367 405 aa6.19□□□□□ -1.42
CCR4YAL021C RIM1P32445 135 aaKnown RBP6.19□□□□□ -1.42
CCR4YAL021C SWD2P36104 329 aaPredicted RBP6.19□□□□□ -1.42
CCR4YAL021C YIL165CP40446 119 aa6.19□□□□□ -1.42
CCR4YAL021C RPL21AQ02753 160 aaKnown RBP6.19□□□□□ -1.42
CCR4YAL021C BSC1Q12140 328 aa6.19□□□□□ -1.42
CCR4YAL021C RPL21BQ12672 160 aaKnown RBP6.19□□□□□ -1.42
CCR4YAL021C MRS4P23500 304 aa6.18□□□□□ -1.42
CCR4YAL021C YBL081WP38180 368 aaKnown RBP6.18□□□□□ -1.42
CCR4YAL021C YBR292CP38357 123 aa6.18□□□□□ -1.42
CCR4YAL021C TES1P41903 349 aaKnown RBP6.18□□□□□ -1.42
CCR4YAL021C TDA7P53882 636 aaPredicted RBP6.18□□□□□ -1.42
CCR4YAL021C YOR385WQ08909 290 aa6.18□□□□□ -1.42
CCR4YAL021C RPB10P22139 70 aa6.18□□□□□ -1.42
CCR4YAL021C PAU24P38155 120 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms