RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 PTK6Q13882 451 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 DCAF4L1Q3SXM0 396 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 NIPA2Q8N8Q9 360 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 TFAP2BQ92481 460 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 ACAP3Q96P50 834 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 MCEEQ96PE7 176 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 DDX56Q9NY93 547 aaKnown RBP16.16■□□□□ 0.18
MBD1-217ENST00000588937 ASIC3Q9UHC3 531 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 ZNF236Q9UL36 1845 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 A0A1B0GUA9 196 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 TSPAN1O60635 241 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 STAU1O95793 577 aaKnown RBP16.15■□□□□ 0.18
MBD1-217ENST00000588937 RARGP13631 454 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 RAD23BP54727 409 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 GSCP56915 257 aaPredicted RBP16.15■□□□□ 0.18
MBD1-217ENST00000588937 RPL7AP62424 266 aaKnown RBP16.15■□□□□ 0.18
MBD1-217ENST00000588937 RBP5P82980 135 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 LMNB2Q03252 620 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 SNX1Q13596 522 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 SLC10A6Q3KNW5 377 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 DNAJC21Q5F1R6 531 aaKnown RBP16.15■□□□□ 0.18
MBD1-217ENST00000588937 PPP1R15BQ5SWA1 713 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 WDTC1Q8N5D0 677 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 BBOF1Q8ND07 529 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 OR2W6PQ8NHA6 318 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 SNF8Q96H20 258 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 PPP1R16BQ96T49 567 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 TJP3O95049 919 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 NFX1Q12986 1120 aaKnown RBP16.15■□□□□ 0.18
MBD1-217ENST00000588937 PCBP1Q15365 356 aaKnown RBP eCLIP16.15■□□□□ 0.18
MBD1-217ENST00000588937 KRT71Q3SY84 523 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 ZFYVE27Q5T4F4 411 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 TMEM176AQ96HP8 235 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 CCDC114Q96M63 670 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 KAT6AQ92794 2004 aa16.15■□□□□ 0.18
MBD1-217ENST00000588937 SIGLEC16A6NMB1 481 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 CILPO75339 1184 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
MBD1-217ENST00000588937 PTPN7P35236 360 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 GRM5P41594 1212 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 RAP1GAPP47736 663 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 PTPN11Q06124 597 aaPredicted RBP16.14■□□□□ 0.17
MBD1-217ENST00000588937 LLGL1Q15334 1064 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 MARCH8Q5T0T0 291 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 DENND1BQ6P3S1 775 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 TRMT10CQ7L0Y3 403 aaKnown RBP16.14■□□□□ 0.17
MBD1-217ENST00000588937 KIAA0319LQ8IZA0 1049 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 CCDC89Q8N998 374 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 FNIP1Q8TF40 1166 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 HPDLQ96IR7 371 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
MBD1-217ENST00000588937 KIAA1257Q9ULG3 409 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 DERAQ9Y315 318 aa16.14■□□□□ 0.17
MBD1-217ENST00000588937 GJB6O95452 261 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 VDRP11473 427 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 ATF2P15336 505 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 GJC1P36383 396 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 ATP1A2P50993 1020 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 CDR1P51861 262 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 DAB2IPQ5VWQ8 1189 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 POLNQ7Z5Q5 900 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 SLC4A11Q8NBS3 891 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 CXorf38Q8TB03 319 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 CCHCR1Q8TD31 782 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 SLITRK1Q96PX8 696 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 HEMGNQ9BXL5 484 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 GCOM2Q9BZD3 368 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 MIS12Q9H081 205 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 PLEKHA5Q9HAU0 1116 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 DPP3Q9NY33 737 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 AGAP1Q9UPQ3 857 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 SRRM3A6NNA2 597 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 FAM155AB1AL88 458 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 HMGCRP04035 888 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 KRT1P04264 644 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 KRT3P12035 628 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 CDH8P55286 799 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 ADCY2Q08462 1091 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 ZNF268Q14587 947 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 KCTD19Q17RG1 926 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 PTPN20Q4JDL3 420 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 DRICH1Q6PGQ1 229 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 CEP128Q6ZU80 1094 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 NPLOC4Q8TAT6 608 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 ATG4AQ8WYN0 398 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 RNF25Q96BH1 459 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 HERPUD2Q9BSE4 406 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 TRAIPQ9BWF2 469 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 SDCBP2Q9H190 292 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 SMYD3Q9H7B4 428 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 SYNCQ9H7C4 482 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 BARX2Q9UMQ3 279 aaPredicted RBP16.13■□□□□ 0.17
MBD1-217ENST00000588937 NRCAMQ92823 1304 aa16.13■□□□□ 0.17
MBD1-217ENST00000588937 O00370 1275 aa16.12■□□□□ 0.17
MBD1-217ENST00000588937 GRIN2DO15399 1336 aa16.12■□□□□ 0.17
MBD1-217ENST00000588937 MEFVO15553 781 aaPredicted RBP16.12■□□□□ 0.17
MBD1-217ENST00000588937 TOMM70O94826 608 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms