RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 MAGEB18Q96M61 343 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 MECRQ9BV79 373 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
PDZD4-209ENST00000544474 BTBD7Q9P203 1132 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 SLC17A7Q9P2U7 560 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 APPL1Q9UKG1 709 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 ITGB4P16144 1822 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 MAGEB3O15480 346 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
PDZD4-209ENST00000544474 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 MYL2P10916 166 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 BGNP21810 368 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 ARSEP51690 589 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 YWHAGP61981 247 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDZD4-209ENST00000544474 BASP1P80723 227 aaKnown RBP13.48□□□□□ -0.25
PDZD4-209ENST00000544474 GAD2Q05329 585 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 QRICH1Q2TAL8 776 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 STXBP4Q6ZWJ1 553 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 FBXO27Q8NI29 283 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 SHKBP1Q8TBC3 707 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 SEC14L1Q92503 715 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 ACSS2Q9NR19 701 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 NEU2Q9Y3R4 380 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 NUB1Q9Y5A7 615 aa13.48□□□□□ -0.25
PDZD4-209ENST00000544474 MIF4GDA9UHW6 222 aaKnown RBP13.47□□□□□ -0.25
PDZD4-209ENST00000544474 SLC16A3O15427 465 aaKnown RBP13.47□□□□□ -0.25
PDZD4-209ENST00000544474 POU5F1Q01860 360 aaKnown RBP13.47□□□□□ -0.25
PDZD4-209ENST00000544474 CYTH1Q15438 398 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 TMEM53Q6P2H8 277 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 RSPH3Q86UC2 560 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 GALNT4Q8N4A0 578 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 RSPH1Q8WYR4 309 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 MIPEPQ99797 713 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 PLVAPQ9BX97 442 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 SIX2Q9NPC8 291 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 APEX2Q9UBZ4 518 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 CFLARO15519 480 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 IDO1P14902 403 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 RPA1P27694 616 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 CD97P48960 835 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 AP1B1Q10567 949 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
PDZD4-209ENST00000544474 SMTNL2Q2TAL5 461 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 ARID3BQ8IVW6 561 aaPredicted RBP13.47□□□□□ -0.25
PDZD4-209ENST00000544474 LRRC43Q8N309 656 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 PCDHB18PQ96TA0 734 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 CBWD1Q9BRT8 395 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 HERPUD2Q9BSE4 406 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 TRIM55Q9BYV6 548 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
PDZD4-209ENST00000544474 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 RPL26L1Q9UNX3 145 aaKnown RBP13.47□□□□□ -0.25
PDZD4-209ENST00000544474 DLEC1Q9Y238 1755 aa13.47□□□□□ -0.25
PDZD4-209ENST00000544474 SPDYE16A6NNV3 312 aaPredicted RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 ECE2O60344 883 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 ASMTLO95671 621 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 TTLL12Q14166 644 aaPredicted RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 TRIP10Q15642 601 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 MAPK6Q16659 721 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 PAOXQ6QHF9 649 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 TCP10LQ8TDR4 215 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 GRAMD1AQ96CP6 724 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 SLC7A6OSQ96CW6 309 aaPredicted RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 ACAP3Q96P50 834 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 CDCA7Q9BWT1 371 aaPredicted RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 NDE1Q9NXR1 346 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 TMOD2Q9NZR1 351 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 TMED5Q9Y3A6 229 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 RAD17O75943 681 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 VARSP26640 1264 aaKnown RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 JAM2P57087 298 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 TCHHL1Q5QJ38 904 aaPredicted RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 SAPCD2Q86UD0 394 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 SATL1Q86VE3 508 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 KBTBD2Q8IY47 623 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 MORC4Q8TE76 937 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 ZNF75CPQ92670 426 aaPredicted RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 CNOT7Q9UIV1 285 aaKnown RBP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 LZTS1Q9Y250 596 aa13.46□□□□□ -0.25
PDZD4-209ENST00000544474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDZD4-209ENST00000544474 ASTN1O14525 1302 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 BOLA2-SMG1P6H3BVE0 249 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 HLA-DOAP06340 250 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 TCN1P20061 433 aaPredicted RBP13.46□□□□□ -0.26
PDZD4-209ENST00000544474 PTPN4P29074 926 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 TMPRSS15P98073 1019 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 TFDP1Q14186 410 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 C4orf50Q6ZRC1 276 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 SERPINB12Q96P63 405 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 TMEM121Q9BTD3 319 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 TRAIPQ9BWF2 469 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 GRID1Q9ULK0 1009 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 SNED1Q8TER0 1413 aa13.46□□□□□ -0.26
PDZD4-209ENST00000544474 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
PDZD4-209ENST00000544474 GTPBP10A4D1E9 387 aaKnown RBP13.45□□□□□ -0.26
PDZD4-209ENST00000544474 CCDC22O60826 627 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms