RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ATP1A3P13637 1013 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 ATF2P15336 505 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 PTPN2P17706 415 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 TARSP26639 723 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 EEF1GP26641 437 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 HOXC13P31276 330 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 VIPR2P41587 438 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 PRCPP42785 496 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.792e-8■■■□□ 15.9
TMEM39A-208ENST00000486159 MCL1Q07820 350 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 ADCY1Q08828 1119 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 TWF1Q12792 350 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 FZD5Q13467 585 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 NOLC1Q14978 699 aaKnown RBP eCLIP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 UBXN2BQ14CS0 331 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 ZBTB6Q15916 424 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 FAM78AQ5JUQ0 283 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 C1orf210Q8IVY1 113 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 VSTM4Q8IW00 320 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 LRRC8AQ8IWT6 810 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 CCDC65Q8IXS2 484 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 TTC9BQ8N6N2 239 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 KIAA1524Q8TCG1 905 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 SPIRE2Q8WWL2 714 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 RSPRY1Q96DX4 576 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 FAM84AQ96KN4 292 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 SUSD3Q96L08 255 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 REEP2Q9BRK0 252 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 DDX23Q9BUQ8 820 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 TOPORSQ9NS56 1045 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 KCND1Q9NSA2 647 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 SPTLC3Q9NUV7 552 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 LIMA1Q9UHB6 759 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 CTNND2Q9UQB3 1225 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 NUB1Q9Y5A7 615 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 INSL5Q9Y5Q6 135 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 ZFHX4Q86UP3 3567 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 CACNA1IQ9P0X4 2223 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 ZFHX2Q9C0A1 2572 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 CACNA1HO95180 2353 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 CHD6Q8TD26 2715 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 PATJQ8NI35 1801 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 TTC26A0AVF1 554 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 ANKRD63C9JTQ0 380 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 SPTLC1O15269 473 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 CLDN3O15551 220 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 TRAPPC3O43617 180 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 LRG1P02750 347 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 TPM2P07951 284 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 MYL4P12829 197 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 CCNE1P24864 410 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 CASP1P29466 404 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 NMT1P30419 496 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 ELF1P32519 619 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 RPL9P32969 192 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 NCKAP1LP55160 1127 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 STRN3Q13033 797 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 ENOX2Q16206 610 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 ZC2HC1CQ53FD0 456 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 STXBP5Q5T5C0 1151 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 KLHL10Q6JEL2 608 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 PDXDC1Q6P996 788 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 TPRG1Q6ZUI0 275 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 MTSS1LQ765P7 747 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 TMC6Q7Z403 805 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 HAUS6Q7Z4H7 955 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 GPBP1Q86WP2 473 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 TCEAL8Q8IYN2 117 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 GUF1Q8N442 669 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 ZSWIM2Q8NEG5 633 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 MED15Q96RN5 788 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 FIZ1Q96SL8 496 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 KCNF1Q9H3M0 494 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 LTB4R2Q9NPC1 389 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 SLC38A7Q9NVC3 462 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 KCND2Q9NZV8 630 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 ZFP37Q9Y6Q3 630 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 COL4A2P08572 1712 aa10.13□□□□□ -0.79
TMEM39A-208ENST00000486159 FANCMQ8IYD8 2048 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 ITIH6Q6UXX5 1313 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 TICRRQ7Z2Z1 1910 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 MYMKA6NI61 221 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 SYN3O14994 580 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 CCP110O43303 1012 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 NFICP08651 508 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 POU2F2P09086 479 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 PRKCSHP14314 528 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 WNT7BP56706 349 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 LRRC63Q05C16 580 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 EHHADHQ08426 723 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 DSG2Q14126 1118 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 TRIM14Q14142 442 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 NR1I3Q14994 352 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 TEAD2Q15562 447 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 WDR44Q5JSH3 913 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 SPECC1LQ69YQ0 1117 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 VITQ6UXI7 678 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms