RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 KRT13P13646 458 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 POLR2BP30876 1174 aaKnown RBP10.52□□□□□ -0.73
NIFK-205ENST00000477693 HOXA9P31269 272 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 GTF2H1P32780 548 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 MTHFRP42898 656 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.73
NIFK-205ENST00000477693 ZNF75DP51815 510 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 AP3M2P53677 418 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 CLDN10P78369 228 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 RBP5P82980 135 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 ROR1Q01973 937 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 CETN1Q12798 172 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 NR1I3Q14994 352 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 CCDC40Q4G0X9 1142 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 CTXN3Q4LDR2 81 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 FKBP15Q5T1M5 1219 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 LMBRD2Q68DH5 695 aaPredicted RBP10.52□□□□□ -0.73
NIFK-205ENST00000477693 GPR149Q86SP6 731 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 TRIM59Q8IWR1 403 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 FAM186BQ8IYM0 893 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 C12orf76Q8N812 135 aaPredicted RBP10.52□□□□□ -0.73
NIFK-205ENST00000477693 KREMEN2Q8NCW0 462 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 ZNF461Q8TAF7 563 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 TMC2Q8TDI7 906 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 SENP8Q96LD8 212 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 CNOT6LQ96LI5 555 aaKnown RBP10.52□□□□□ -0.73
NIFK-205ENST00000477693 RIPOR3Q96MK2 946 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 NECAB3Q96P71 396 aaPredicted RBP10.52□□□□□ -0.73
NIFK-205ENST00000477693 CGRRF1Q99675 332 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 APOL5Q9BWW9 433 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 PHF7Q9BWX1 381 aaPredicted RBP10.52□□□□□ -0.73
NIFK-205ENST00000477693 GDAP2Q9NXN4 497 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 DSEQ9UL01 958 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 AGAP1Q9UPQ3 857 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 DAAM1Q9Y4D1 1078 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.52□□□□□ -0.73
NIFK-205ENST00000477693 MUC6Q6W4X9 2439 aa10.52□□□□□ -0.73
NIFK-205ENST00000477693 CCDC195A0A1B0GUA6 201 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 WDR27A2RRH5 827 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 GTPBP10A4D1E9 387 aaKnown RBP10.51□□□□□ -0.73
NIFK-205ENST00000477693 OR6C75A6NL08 312 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 LGALS16A8MUM7 142 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 LOC730098B7Z3J9 87 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 CYB561D2O14569 222 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 P4HA2O15460 535 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 RFPL2O75678 378 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 ZMYND10O75800 440 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 AKAP3O75969 853 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 POU2F2P09086 479 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 SPATA31D3P0C874 917 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 DLATP10515 647 aaKnown RBP10.51□□□□□ -0.73
NIFK-205ENST00000477693 ATP1A3P13637 1013 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 ATF2P15336 505 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 TNNI1P19237 187 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 COPB1P53618 953 aaKnown RBP10.51□□□□□ -0.73
NIFK-205ENST00000477693 TRIM14Q14142 442 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 KRT31Q15323 416 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 VWA3BQ502W6 1294 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 ATAT1Q5SQI0 421 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 CEP135Q66GS9 1140 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 TPGS2Q68CL5 300 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 SCARA3Q6AZY7 606 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 OVOS1Q6IE37 1185 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 TMC5Q6UXY8 1006 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 SPATA31D4Q6ZUB0 917 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 APTXQ7Z2E3 356 aaKnown RBP10.51□□□□□ -0.73
NIFK-205ENST00000477693 PARD3BQ8TEW8 1205 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 PDLIM2Q96JY6 352 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 FAM84AQ96KN4 292 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 PPP1R9BQ96SB3 815 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 NUP58Q9BVL2 599 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 IFNKQ9P0W0 207 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 CDH22Q9UJ99 828 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 MAFFQ9ULX9 164 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 TIMM13Q9Y5L4 95 aaPredicted RBP10.51□□□□□ -0.73
NIFK-205ENST00000477693 TSC2P49815 1807 aa10.51□□□□□ -0.73
NIFK-205ENST00000477693 LRRIQ3A6PVS8 624 aaPredicted RBP10.5□□□□□ -0.73
NIFK-205ENST00000477693 TULP1O00294 542 aaPredicted RBP10.5□□□□□ -0.73
NIFK-205ENST00000477693 STAU1O95793 577 aaKnown RBP10.5□□□□□ -0.73
NIFK-205ENST00000477693 C8AP07357 584 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 KRT19P08727 400 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 HNRNPA1P09651 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
NIFK-205ENST00000477693 CASP4P49662 377 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 MYO1EQ12965 1108 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 LIN9Q5TKA1 542 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 CCDC149Q6ZUS6 474 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 TRAPPC11Q7Z392 1133 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 LIMS2Q7Z4I7 341 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 METTL23Q86XA0 190 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 GJD3Q8N144 294 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 SLC7A14Q8TBB6 771 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 FEZF2Q8TBJ5 459 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 SPATA18Q8TC71 538 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 PLEKHO2Q8TD55 490 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 ZNF516Q92618 1163 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 CCDC127Q96BQ5 260 aa10.5□□□□□ -0.73
NIFK-205ENST00000477693 ZNF707Q96C28 371 aaPredicted RBP10.5□□□□□ -0.73
NIFK-205ENST00000477693 LRFN3Q9BTN0 628 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms