RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 NR2C2P49116 596 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 ITGA1P56199 1179 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 FPGSQ05932 587 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 KLC1Q07866 573 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 TP53BP2Q13625 1128 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 LRRC38Q5VT99 294 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 PPIL6Q8IXY8 311 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 SNX19Q92543 992 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 VPS33AQ96AX1 596 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 TIFAQ96CG3 184 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 HIST1H2AHQ96KK5 128 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 HIST1H2AJQ99878 128 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 H2AFJQ9BTM1 129 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 GREM2Q9H772 168 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 ZNF556Q9HAH1 456 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 KLHL8Q9P2G9 620 aaPredicted RBP6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 UBA2Q9UBT2 640 aaPredicted RBP6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 AKT3Q9Y243 479 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 MAGEA13PA6NCF6 341 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 INO80B-WBP1J3KQ70 363 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 TRDMT1O14717 391 aaKnown RBP6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 SOAT2O75908 522 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 SEMA3DO95025 777 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 HMGCRP04035 888 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 OCRLQ01968 901 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 RUNX1T1Q06455 604 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 HIST2H2ACQ16777 129 aaPredicted RBP6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 C12orf60Q5U649 245 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 HIST2H2AA3Q6FI13 130 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 DPH6Q7L8W6 267 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 METTL13Q8N6R0 699 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 ANKRD7Q92527 254 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 PPP1R14BQ96C90 147 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 DNAJC7Q99615 494 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 FSD1LQ9BXM9 530 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 ZFATQ9P243 1243 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 TRHDEQ9UKU6 1024 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 SPACA6W5XKT8 324 aa6.41□□□□□ -1.38
CCDC144A-212ENST00000470068 FRMPD4Q14CM0 1322 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 MPOP05164 745 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 POLBP06746 335 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 STAG3L1P0CL83 205 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 KCNA5P22460 613 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 S100A5P33763 92 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 C16orf86Q6ZW13 317 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 SVOPQ8N4V2 548 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 WDR60Q8WVS4 1066 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 ATXN2LQ8WWM7 1075 aaKnown RBP6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 GJA10Q969M2 543 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 BTBD6Q96KE9 485 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 HEXIM2Q96MH2 286 aaKnown RBP6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 CCT7Q99832 543 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 ANAPC7Q9UJX3 599 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 APC2O95996 2303 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 CEMIPQ8WUJ3 1361 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 HNRNPCL2B2RXH8 293 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 INHAP05111 366 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 DLATP10515 647 aaKnown RBP6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 TGM2P21980 687 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 RRM1P23921 792 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 MARK3P27448 753 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 ACTR2P61160 394 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 ITKQ08881 620 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 SMARCB1Q12824 385 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 NR1I3Q14994 352 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 MAPK11Q15759 364 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 USH1GQ495M9 461 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 HIBCHQ6NVY1 386 aaPredicted RBP6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 CCNI2Q6ZMN8 369 aaPredicted RBP6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 CATSPER4Q7RTX7 472 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 HEXDCQ8WVB3 486 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 SPIRE2Q8WWL2 714 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 C18orf8Q96DM3 657 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 PIGSQ96S52 555 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 OSBPL8Q9BZF1 889 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 SAYSD1Q9NPB0 183 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 ENTPD7Q9NQZ7 604 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 CLDND1Q9NY35 253 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 SCHIP1Q9P0W5 487 aaPredicted RBP6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 ADAM28Q9UKQ2 775 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 SHOC2Q9UQ13 582 aa6.4□□□□□ -1.38
CCDC144A-212ENST00000470068 POC1B-GALNT4F8VUJ3 575 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 FAM163BP0C2L3 166 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 LRRC74AQ0VAA2 488 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 IMPG1Q17R60 797 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 TRMT5Q32P41 509 aaKnown RBP6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 LYPLAL1Q5VWZ2 237 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 PCNX4Q63HM2 1172 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 IKBIPQ70UQ0 350 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 PLEKHH3Q7Z736 793 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 GMCL1P1Q8NEA9 526 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 FAM151AQ8WW52 585 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 SOCS4Q8WXH5 440 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 SEPT1Q8WYJ6 367 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 VPS50Q96JG6 964 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 CLIC6Q96NY7 704 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 TEX13BQ9BXU2 312 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 ABCB6Q9NP58 842 aa6.4□□□□□ -1.39
CCDC144A-212ENST00000470068 TRPM5Q9NZQ8 1165 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms