RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
CCDC144A-212ENST00000470068 NISCHQ9Y2I1 1504 aa10.24□□□□□ -0.77
CCDC144A-212ENST00000470068 AEBP2Q6ZN18 517 aaPredicted RBP10.06□□□□□ -0.8
CCDC144A-212ENST00000470068 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
CCDC144A-212ENST00000470068 TRIM41Q8WV44 630 aa9.84□□□□□ -0.83
CCDC144A-212ENST00000470068 FAM9AQ8IZU1 332 aaPredicted RBP9.82□□□□□ -0.84
CCDC144A-212ENST00000470068 ABCC9O60706 1549 aa9.79□□□□□ -0.84
CCDC144A-212ENST00000470068 TRHP20396 242 aaPredicted RBP9.72□□□□□ -0.85
CCDC144A-212ENST00000470068 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC144A-212ENST00000470068 MYT1Q01538 1121 aa9.62□□□□□ -0.87
CCDC144A-212ENST00000470068 ZEB1P37275 1124 aaPredicted RBP9.59□□□□□ -0.87
CCDC144A-212ENST00000470068 MYT1LQ9UL68 1186 aa9.49□□□□□ -0.89
CCDC144A-212ENST00000470068 FBLN2P98095 1184 aa9.47□□□□□ -0.89
CCDC144A-212ENST00000470068 APLP2Q06481 763 aa9.46□□□□□ -0.89
CCDC144A-212ENST00000470068 TTBK1Q5TCY1 1321 aaPredicted RBP9.44□□□□□ -0.9
CCDC144A-212ENST00000470068 CCER1Q8TC90 406 aaPredicted RBP9.43□□□□□ -0.9
CCDC144A-212ENST00000470068 PLPPR3Q6T4P5 718 aa9.36□□□□□ -0.91
CCDC144A-212ENST00000470068 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC144A-212ENST00000470068 CENPBP07199 599 aaPredicted RBP9.28□□□□□ -0.92
CCDC144A-212ENST00000470068 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
CCDC144A-212ENST00000470068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.19□□□□□ -0.94
CCDC144A-212ENST00000470068 HNRNPUL2Q1KMD3 747 aaKnown RBP9.19□□□□□ -0.94
CCDC144A-212ENST00000470068 CHIC1Q5VXU3 224 aa9.18□□□□□ -0.94
CCDC144A-212ENST00000470068 ESF1Q9H501 851 aaKnown RBP9.14□□□□□ -0.95
CCDC144A-212ENST00000470068 SCAF1Q9H7N4 1312 aaKnown RBP9.13□□□□□ -0.95
CCDC144A-212ENST00000470068 ATP1B4Q9UN42 357 aaPredicted RBP9.13□□□□□ -0.95
CCDC144A-212ENST00000470068 YTHDC1Q96MU7 727 aaKnown RBP9.13□□□□□ -0.95
CCDC144A-212ENST00000470068 ERCC6Q03468 1493 aa9.12□□□□□ -0.95
CCDC144A-212ENST00000470068 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
CCDC144A-212ENST00000470068 ACIN1Q9UKV3 1341 aaKnown RBP9.02□□□□□ -0.97
CCDC144A-212ENST00000470068 SHROOM4Q9ULL8 1493 aa9.01□□□□□ -0.97
CCDC144A-212ENST00000470068 NEFLP07196 543 aa9.01□□□□□ -0.97
CCDC144A-212ENST00000470068 PHF23Q9BUL5 403 aaPredicted RBP9.01□□□□□ -0.97
CCDC144A-212ENST00000470068 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
CCDC144A-212ENST00000470068 SENP3Q9H4L4 574 aaPredicted RBP8.99□□□□□ -0.97
CCDC144A-212ENST00000470068 RANGAP1P46060 587 aaPredicted RBP8.98□□□□□ -0.97
CCDC144A-212ENST00000470068 ARID4BQ4LE39 1312 aaPredicted RBP8.98□□□□□ -0.97
CCDC144A-212ENST00000470068 CYB5RLQ6IPT4 315 aa8.95□□□□□ -0.98
CCDC144A-212ENST00000470068 BCANQ96GW7 911 aa8.94□□□□□ -0.98
CCDC144A-212ENST00000470068 CLSPNQ9HAW4 1339 aa8.93□□□□□ -0.98
CCDC144A-212ENST00000470068 DCAF8L1A6NGE4 600 aa8.91□□□□□ -0.98
CCDC144A-212ENST00000470068 CHMP7Q8WUX9 453 aaPredicted RBP8.91□□□□□ -0.98
CCDC144A-212ENST00000470068 TRIM26Q12899 539 aaPredicted RBP8.9□□□□□ -0.98
CCDC144A-212ENST00000470068 DNAJC5Q9H3Z4 198 aa8.89□□□□□ -0.99
CCDC144A-212ENST00000470068 OSCARQ8IYS5 282 aa8.87□□□□□ -0.99
CCDC144A-212ENST00000470068 DNAJC5BQ9UF47 199 aa8.83□□□□□ -1
CCDC144A-212ENST00000470068 FOXD1Q16676 465 aa8.81□□□□□ -1
CCDC144A-212ENST00000470068 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
CCDC144A-212ENST00000470068 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
CCDC144A-212ENST00000470068 DAXXQ9UER7 740 aaPredicted RBP8.72□□□□□ -1.01
CCDC144A-212ENST00000470068 CECR2Q9BXF3 1484 aa8.71□□□□□ -1.02
CCDC144A-212ENST00000470068 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
CCDC144A-212ENST00000470068 A0A0G2JS52 829 aa8.7□□□□□ -1.02
CCDC144A-212ENST00000470068 PCGF6Q9BYE7 350 aa8.7□□□□□ -1.02
CCDC144A-212ENST00000470068 C14orf37Q86TY3 774 aa8.69□□□□□ -1.02
CCDC144A-212ENST00000470068 STAG3Q9UJ98 1225 aa8.67□□□□□ -1.02
CCDC144A-212ENST00000470068 HRCP23327 699 aa8.66□□□□□ -1.02
CCDC144A-212ENST00000470068 EEA1Q15075 1411 aa8.64□□□□□ -1.03
CCDC144A-212ENST00000470068 NEFMP07197 916 aa8.63□□□□□ -1.03
CCDC144A-212ENST00000470068 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
CCDC144A-212ENST00000470068 MLECQ14165 292 aa8.61□□□□□ -1.03
CCDC144A-212ENST00000470068 EIF5BO60841 1220 aaKnown RBP8.6□□□□□ -1.03
CCDC144A-212ENST00000470068 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
CCDC144A-212ENST00000470068 RB1CC1Q8TDY2 1594 aa8.59□□□□□ -1.04
CCDC144A-212ENST00000470068 DCAF1Q9Y4B6 1507 aa8.58□□□□□ -1.04
CCDC144A-212ENST00000470068 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
CCDC144A-212ENST00000470068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC144A-212ENST00000470068 MEX3CQ5U5Q3 659 aaKnown RBP8.56□□□□□ -1.04
CCDC144A-212ENST00000470068 CDK11AQ9UQ88 783 aaPredicted RBP8.54□□□□□ -1.04
CCDC144A-212ENST00000470068 ZCCHC6Q5VYS8 1495 aaKnown RBP8.54□□□□□ -1.04
CCDC144A-212ENST00000470068 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.05
CCDC144A-212ENST00000470068 PLEKHG5O94827 1062 aa8.5□□□□□ -1.05
CCDC144A-212ENST00000470068 DISP3Q9P2K9 1392 aa8.5□□□□□ -1.05
CCDC144A-212ENST00000470068 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
CCDC144A-212ENST00000470068 NACADO15069 1562 aa8.47□□□□□ -1.05
CCDC144A-212ENST00000470068 SCRIBQ14160 1630 aa8.46□□□□□ -1.06
CCDC144A-212ENST00000470068 SF3B2Q13435 895 aaKnown RBP8.45□□□□□ -1.06
CCDC144A-212ENST00000470068 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
CCDC144A-212ENST00000470068 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
CCDC144A-212ENST00000470068 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
CCDC144A-212ENST00000470068 MYO15BQ96JP2 1530 aa8.43□□□□□ -1.06
CCDC144A-212ENST00000470068 ANP32CO43423 234 aa8.43□□□□□ -1.06
CCDC144A-212ENST00000470068 SLC4A1APQ9BWU0 796 aaKnown RBP8.41□□□□□ -1.06
CCDC144A-212ENST00000470068 CCDC9Q9Y3X0 531 aaKnown RBP8.41□□□□□ -1.06
CCDC144A-212ENST00000470068 ANP32EQ9BTT0 268 aa8.41□□□□□ -1.06
CCDC144A-212ENST00000470068 CHGAP10645 457 aaKnown RBP8.39□□□□□ -1.07
CCDC144A-212ENST00000470068 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
CCDC144A-212ENST00000470068 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
CCDC144A-212ENST00000470068 ZNF777Q9ULD5 760 aaPredicted RBP8.38□□□□□ -1.07
CCDC144A-212ENST00000470068 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
CCDC144A-212ENST00000470068 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
CCDC144A-212ENST00000470068 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
CCDC144A-212ENST00000470068 RSF1Q96T23 1441 aaPredicted RBP8.37□□□□□ -1.07
CCDC144A-212ENST00000470068 KLHL34Q8N239 644 aa8.33□□□□□ -1.08
CCDC144A-212ENST00000470068 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.33□□□□□ -1.08
CCDC144A-212ENST00000470068 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
CCDC144A-212ENST00000470068 DMRT2Q9Y5R5 561 aa8.31□□□□□ -1.08
CCDC144A-212ENST00000470068 PPP1R1BQ9UD71 204 aaPredicted RBP8.31□□□□□ -1.08
CCDC144A-212ENST00000470068 UBAP1LF5GYI3 381 aa8.31□□□□□ -1.08
CCDC144A-212ENST00000470068 ANP32BQ92688 251 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms