RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 MYL3P08590 195 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 GNAT1P11488 350 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 HOXC8P31273 242 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 COILP38432 576 aaPredicted RBP21.26■□□□□ 0.99
PTPN11-202ENST00000392597 YARSP54577 528 aaKnown RBP21.26■□□□□ 0.99
PTPN11-202ENST00000392597 CDH8P55286 799 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 TMEM62Q0P6H9 643 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 CFAP58Q5T655 872 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 LRRC38Q5VT99 294 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 DENND1BQ6P3S1 775 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 CCDC137Q6PK04 289 aaKnown RBP21.26■□□□□ 0.99
PTPN11-202ENST00000392597 DDX42Q86XP3 938 aaKnown RBP eCLIP21.26■□□□□ 0.99
PTPN11-202ENST00000392597 SLCO2A1Q92959 643 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 OSMRQ99650 979 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 TRIM51Q9BSJ1 452 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 PSD3Q9NYI0 1048 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 KIAA1257Q9ULG3 409 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 BARX2Q9UMQ3 279 aaPredicted RBP21.26■□□□□ 0.99
PTPN11-202ENST00000392597 GINS2Q9Y248 185 aa21.26■□□□□ 0.99
PTPN11-202ENST00000392597 TCRBV7S2A1N4TA0A589 114 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 MYO1EQ12965 1108 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 FSCN1Q16658 493 aaKnown RBP21.25■□□□□ 0.99
PTPN11-202ENST00000392597 NME8Q8N427 588 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 NIPA2Q8N8Q9 360 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 EXD1Q8NHP7 514 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 CD99L2Q8TCZ2 262 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 TSPAN18Q96SJ8 248 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 ELOVL4Q9GZR5 314 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 CDHR5Q9HBB8 845 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 WDR35Q9P2L0 1181 aa21.25■□□□□ 0.99
PTPN11-202ENST00000392597 GOLGA8KD6RF30 607 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 KPNA6O60684 536 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 HMGCRP04035 888 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 VDRP11473 427 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 AKR1A1P14550 325 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 CAP1Q01518 475 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 DMTNQ08495 405 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 MTMR3Q13615 1198 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 PIGHQ14442 188 aaPredicted RBP21.24■□□□□ 0.99
PTPN11-202ENST00000392597 ARHGEF6Q15052 776 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 TTC27Q6P3X3 843 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 DCUN1D2Q6PH85 259 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 DNAJB3Q8WWF6 145 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 FAM129AQ9BZQ8 928 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 HOMER3Q9NSC5 361 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 TRIP11Q15643 1979 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 TAS2R40P59535 323 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 RPL7AP62424 266 aaKnown RBP21.24■□□□□ 0.99
PTPN11-202ENST00000392597 HIC1Q14526 733 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 SNX17Q15036 470 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 ZBTB6Q15916 424 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 CNGA2Q16280 664 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 ZIM3Q96PE6 472 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 NEUROG2Q9H2A3 272 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 DPH5Q9H2P9 285 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 SNTG2Q9NY99 539 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 CNTN3Q9P232 1028 aa21.24■□□□□ 0.99
PTPN11-202ENST00000392597 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.24■□□□□ 0.99
PTPN11-202ENST00000392597 CASP8AP2Q9UKL3 1982 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 CENPFP49454 3210 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 C17orf102A2RUQ5 167 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 TREHO43280 583 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 DUSP11O75319 330 aaKnown RBP21.23■□□□□ 0.99
PTPN11-202ENST00000392597 PURAQ00577 322 aaKnown RBP21.23■□□□□ 0.99
PTPN11-202ENST00000392597 PTPN20Q4JDL3 420 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 SGO2Q562F6 1265 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 SPDYCQ5MJ68 293 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 ALKAL1Q6UXT8 129 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 CCDC105Q8IYK2 499 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 MCEEQ96PE7 176 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 TWNKQ96RR1 684 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 EIF2AQ9BY44 585 aaKnown RBP21.23■□□□□ 0.99
PTPN11-202ENST00000392597 PARP2Q9UGN5 583 aa21.23■□□□□ 0.99
PTPN11-202ENST00000392597 TRIP12Q14669 1992 aaPredicted RBP21.23■□□□□ 0.99
PTPN11-202ENST00000392597 SIGLEC16A6NMB1 481 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 HOXD10P28358 340 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 CETN2P41208 172 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 CRYBB1P53674 252 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 IRX5P78411 483 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 BEX3Q00994 111 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 LRIG3Q6UXM1 1119 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 SYDE1Q6ZW31 735 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 LRRC52Q8N7C0 313 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 BEST2Q8NFU1 509 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 FNIP1Q8TF40 1166 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 RIN2Q8WYP3 895 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 PIK3R5Q8WYR1 880 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 FMO2Q99518 471 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 HMGXB4Q9UGU5 601 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 HTTP42858 3142 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 PDCD11Q14690 1871 aaKnown RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 HSPA1AP0DMV8 641 aaKnown RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 HSPA1BP0DMV9 641 aaKnown RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 ZNF252P-AS1Q0IIN9 211 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 KLF1Q13351 362 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 ZNF268Q14587 947 aaPredicted RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 STILQ15468 1287 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 TMEM130Q8N3G9 435 aa21.22■□□□□ 0.99
PTPN11-202ENST00000392597 RBM41Q96IZ5 413 aaKnown RBP21.22■□□□□ 0.99
PTPN11-202ENST00000392597 PKNOX2Q96KN3 472 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms