RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	ERG24	P32462	438 aa	Known RBP	3.2	□□□□□ -1.9
SPN1	YPR133C	PAU2	P32612	120 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	SFK1	P35735	353 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	SRL3	P36167	246 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	NRG2	P38082	220 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	ECM33	P38248	429 aa	Known RBP	3.2	□□□□□ -1.9
SPN1	YPR133C	HAM1	P47119	197 aa	Known RBP	3.2	□□□□□ -1.9
SPN1	YPR133C	SOL1	P50278	321 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	ERG25	P53045	309 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	MRPL50	P53724	139 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	CAF40	P53829	373 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	MSH5	Q12175	901 aa		3.2	□□□□□ -1.9
SPN1	YPR133C	NHP6B	P11633	99 aa	Known RBP	3.19	□□□□□ -1.9
SPN1	YPR133C	YCR022C	P25620	114 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	RFA3	P26755	122 aa	Known RBP	3.19	□□□□□ -1.9
SPN1	YPR133C	OCH1	P31755	480 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	PDC2	P32896	925 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	UTP30	P36144	274 aa	Known RBP	3.19	□□□□□ -1.9
SPN1	YPR133C	IKI1	P38874	309 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	YNL194C	P40169	301 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	PRM5	P40476	318 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	BMT5	P40493	336 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	HIT1	P46973	164 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	CRH1	P53301	507 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	YMR181C	Q03231	154 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	LPP1	Q04396	274 aa		3.19	□□□□□ -1.9
SPN1	YPR133C	ZRC1	P20107	442 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	PRE7	P23724	241 aa	Known RBP	3.18	□□□□□ -1.9
SPN1	YPR133C	AGA2	P32781	87 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	ZRT1	P32804	376 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	RPB7	P34087	171 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	YBR137W	P38276	179 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	JLP2	P40206	208 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	RFC2	P40348	353 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	YFR035C	P43608	114 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	DIE2	P50076	525 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	CWC25	P53854	179 aa	Known RBP	3.18	□□□□□ -1.9
SPN1	YPR133C	ALG9	P53868	555 aa	Known RBP	3.18	□□□□□ -1.9
SPN1	YPR133C	BUD25	P85052	153 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	RDS3	Q06835	107 aa	Predicted RBP	3.18	□□□□□ -1.9
SPN1	YPR133C	YGK3	Q12222	375 aa	Predicted RBP	3.18	□□□□□ -1.9
SPN1	YPR133C	TAR1	Q8TGM6	124 aa		3.18	□□□□□ -1.9
SPN1	YPR133C	RPL9A	P05738	191 aa	Known RBP	3.17	□□□□□ -1.9
SPN1	YPR133C	RPL24B	P24000	155 aa	Known RBP	3.17	□□□□□ -1.9
SPN1	YPR133C	ROX3	P25046	220 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	AHC2	P25649	128 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	ALK2	P32789	676 aa	Predicted RBP	3.17	□□□□□ -1.9
SPN1	YPR133C	AST1	P35183	429 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	MRPL38	P35996	138 aa	Predicted RBP	3.17	□□□□□ -1.9
SPN1	YPR133C	SRY1	P36007	326 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	ATG18	P43601	500 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	YJR012C	P47087	207 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	BXI1	P48558	297 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	FMP48	P53233	369 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	YGR219W	P53307	113 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	CTF19	Q02732	369 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	VBA1	Q04301	562 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	HNT1	Q04344	158 aa	Known RBP	3.17	□□□□□ -1.9
SPN1	YPR133C	YLR099W-A	Q3E798	87 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	YCR024C-B	Q3E7Z8	88 aa		3.17	□□□□□ -1.9
SPN1	YPR133C	RPL31A	P0C2H8	113 aa	Known RBP	3.16	□□□□□ -1.9
SPN1	YPR133C	RIB5	P38145	238 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	RTC3	P38804	111 aa	Predicted RBP	3.16	□□□□□ -1.9
SPN1	YPR133C	NVJ1	P38881	321 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	YER137C	P40083	148 aa	Known RBP	3.16	□□□□□ -1.9
SPN1	YPR133C	GPI14	P47088	403 aa	Known RBP	3.16	□□□□□ -1.9
SPN1	YPR133C	DOC1	P53068	250 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	CAX4	P53223	239 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	SLX9	P53251	210 aa	Predicted RBP	3.16	□□□□□ -1.9
SPN1	YPR133C	FSH2	Q05015	223 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	PEX10	Q05568	337 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
SPN1	YPR133C	IRC23	Q08416	157 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	YOR292C	Q08743	309 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	POM33	Q12164	279 aa		3.16	□□□□□ -1.9
SPN1	YPR133C	SAL1	D6W196	494 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	QCR7	P00128	127 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	HTB1	P02293	131 aa	Known RBP	3.15	□□□□□ -1.91
SPN1	YPR133C	YMR31	P19955	123 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	IFM1	P25038	676 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	YCR043C	P25361	127 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	MIC12	P38341	106 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	EGD2	P38879	174 aa	Known RBP	3.15	□□□□□ -1.91
SPN1	YPR133C	FCY21	P40039	528 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	TAD2	P47058	250 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	MST27	P53176	234 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	CPD1	P53314	239 aa		3.15	□□□□□ -1.91
SPN1	YPR133C	PET494	P07390	489 aa	Predicted RBP	3.14	□□□□□ -1.91
SPN1	YPR133C	PET54	P10834	293 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	MIX23	P38162	196 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	COX14	P39103	70 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	SMB1	P40018	196 aa	Known RBP	3.14	□□□□□ -1.91
SPN1	YPR133C	DFG10	P40526	253 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	YIA6	P40556	373 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	SYS1	P41544	203 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	HCH1	P53834	153 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	TSA2	Q04120	196 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	CSM4	Q08955	156 aa		3.14	□□□□□ -1.91
SPN1	YPR133C	TIR4	Q12218	487 aa	Predicted RBP	3.14	□□□□□ -1.91
SPN1	YPR133C	TRM10	Q12400	293 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms