RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W INO80P53115 1489 aa-0.06□□□□□ -2.42
SGF11YPL047W HFA1P32874 2273 aa-0.07□□□□□ -2.42
SGF11YPL047W KIN28P06242 306 aa-0.07□□□□□ -2.42
SGF11YPL047W RPL43AP0CX25 92 aaKnown RBP-0.07□□□□□ -2.42
SGF11YPL047W RPL43BP0CX26 92 aa-0.07□□□□□ -2.42
SGF11YPL047W NHP6BP11633 99 aaKnown RBP-0.07□□□□□ -2.42
SGF11YPL047W PRE1P22141 198 aaKnown RBP-0.07□□□□□ -2.42
SGF11YPL047W NTG1P31378 399 aa-0.07□□□□□ -2.42
SGF11YPL047W PRP18P33411 251 aaPredicted RBP-0.07□□□□□ -2.42
SGF11YPL047W IKI1P38874 309 aa-0.07□□□□□ -2.42
SGF11YPL047W NSA2P40078 261 aaKnown RBP-0.07□□□□□ -2.42
SGF11YPL047W YFL019CP43576 117 aa-0.07□□□□□ -2.42
SGF11YPL047W GPI14P47088 403 aaKnown RBP-0.07□□□□□ -2.42
SGF11YPL047W TMA22P47089 198 aaPredicted RBP-0.07□□□□□ -2.42
SGF11YPL047W RAD17P48581 401 aa-0.07□□□□□ -2.42
SGF11YPL047W NRK1P53915 240 aa-0.07□□□□□ -2.42
SGF11YPL047W YKR005CQ02203 525 aa-0.07□□□□□ -2.42
SGF11YPL047W GRX5Q02784 150 aa-0.07□□□□□ -2.42
SGF11YPL047W PIR1Q03178 341 aa-0.07□□□□□ -2.42
SGF11YPL047W GPI17Q04080 534 aa-0.07□□□□□ -2.42
SGF11YPL047W ATP20Q12233 115 aa-0.07□□□□□ -2.42
SGF11YPL047W YML100W-AQ8TGT0 57 aa-0.07□□□□□ -2.42
SGF11YPL047W STE18P18852 110 aa-0.08□□□□□ -2.42
SGF11YPL047W SPS18P32572 300 aa-0.08□□□□□ -2.42
SGF11YPL047W RRT1P38192 103 aa-0.08□□□□□ -2.42
SGF11YPL047W YNL194CP40169 301 aa-0.08□□□□□ -2.42
SGF11YPL047W YMR141CP40211 102 aa-0.08□□□□□ -2.42
SGF11YPL047W RFC4P40339 323 aaKnown RBP-0.08□□□□□ -2.42
SGF11YPL047W CWC23P52868 283 aaPredicted RBP-0.08□□□□□ -2.42
SGF11YPL047W ATG41Q12048 136 aa-0.08□□□□□ -2.42
SGF11YPL047W RUD3Q12234 484 aaKnown RBP-0.08□□□□□ -2.42
SGF11YPL047W YOR381W-AQ3E804 55 aa-0.08□□□□□ -2.42
SGF11YPL047W YLR307C-AQ3E825 87 aa-0.08□□□□□ -2.42
SGF11YPL047W MRS1P07266 363 aa-0.09□□□□□ -2.42
SGF11YPL047W RTR1P40084 226 aaPredicted RBP-0.09□□□□□ -2.42
SGF11YPL047W APS3P47064 194 aa-0.09□□□□□ -2.42
SGF11YPL047W HHT1P61830 136 aa-0.09□□□□□ -2.42
SGF11YPL047W SEN15Q04675 128 aa-0.09□□□□□ -2.42
SGF11YPL047W FCY1Q12178 158 aa-0.09□□□□□ -2.42
SGF11YPL047W CDC33P07260 213 aaKnown RBP-0.1□□□□□ -2.43
SGF11YPL047W YLR157W-EP0CF00 54 aa-0.1□□□□□ -2.43
SGF11YPL047W COQ1P18900 473 aa-0.1□□□□□ -2.43
SGF11YPL047W CBT1P36038 271 aaPredicted RBP-0.1□□□□□ -2.43
SGF11YPL047W NSG1P38837 291 aa-0.1□□□□□ -2.43
SGF11YPL047W POG1P40473 351 aa-0.1□□□□□ -2.43
SGF11YPL047W CIN5P40917 295 aa-0.1□□□□□ -2.43
SGF11YPL047W GLC8P41818 229 aa-0.1□□□□□ -2.43
SGF11YPL047W CCC1P47818 322 aa-0.1□□□□□ -2.43
SGF11YPL047W PAC10P48363 199 aa-0.1□□□□□ -2.43
SGF11YPL047W YNL184CP53876 108 aa-0.1□□□□□ -2.43
SGF11YPL047W ROM2P51862 1356 aaKnown RBP-0.1□□□□□ -2.43
SGF11YPL047W RPS22AP0C0W1 130 aaKnown RBP-0.11□□□□□ -2.43
SGF11YPL047W RFA3P26755 122 aaKnown RBP-0.11□□□□□ -2.43
SGF11YPL047W YHR140WP38842 239 aa-0.11□□□□□ -2.43
SGF11YPL047W PGA1P53896 198 aa-0.11□□□□□ -2.43
SGF11YPL047W YOR072WQ08486 104 aa-0.11□□□□□ -2.43
SGF11YPL047W RPS22BQ3E7Y3 130 aaKnown RBP-0.11□□□□□ -2.43
SGF11YPL047W DUR1,2P32528 1835 aaKnown RBP-0.11□□□□□ -2.43
SGF11YPL047W CLG1P35190 452 aa-0.12□□□□□ -2.43
SGF11YPL047W YNL200CP40165 246 aaKnown RBP-0.12□□□□□ -2.43
SGF11YPL047W MOB1P40484 314 aa-0.12□□□□□ -2.43
SGF11YPL047W MGR2Q02889 113 aa-0.12□□□□□ -2.43
SGF11YPL047W ARO80Q04052 950 aa-0.12□□□□□ -2.43
SGF11YPL047W RIB3Q99258 208 aa-0.12□□□□□ -2.43
SGF11YPL047W HAP2P06774 265 aa-0.13□□□□□ -2.43
SGF11YPL047W GCY1P14065 312 aaKnown RBP RIP-Chip data-0.13□□□□□ -2.43not detected
SGF11YPL047W HSP30P25619 332 aa-0.13□□□□□ -2.43
SGF11YPL047W ADE1P27616 306 aa-0.13□□□□□ -2.43
SGF11YPL047W ATG8P38182 117 aaRIP-Chip data-0.13□□□□□ -2.43not detected
SGF11YPL047W YBR027CP38220 110 aa-0.13□□□□□ -2.43
SGF11YPL047W MSS2P40990 351 aa-0.13□□□□□ -2.43
SGF11YPL047W RIM9Q04734 239 aa-0.13□□□□□ -2.43
SGF11YPL047W GAL83Q04739 417 aa-0.13□□□□□ -2.43
SGF11YPL047W AVO2Q04749 426 aa-0.13□□□□□ -2.43
SGF11YPL047W YLR422WQ06409 1932 aa-0.14□□□□□ -2.43
SGF11YPL047W RPS25BP0C0T4 108 aaKnown RBP-0.14□□□□□ -2.43
SGF11YPL047W SEC14P24280 304 aaKnown RBP-0.14□□□□□ -2.43
SGF11YPL047W FYV4P38783 130 aaPredicted RBP-0.14□□□□□ -2.43
SGF11YPL047W YGR269WP40326 108 aa-0.14□□□□□ -2.43
SGF11YPL047W RFC2P40348 353 aa-0.14□□□□□ -2.43
SGF11YPL047W MMS2P53152 137 aa-0.14□□□□□ -2.43
SGF11YPL047W YNL122CP53921 115 aaPredicted RBP-0.14□□□□□ -2.43
SGF11YPL047W YML079WQ03629 201 aa-0.14□□□□□ -2.43
SGF11YPL047W YPR127WQ06494 345 aa-0.14□□□□□ -2.43
SGF11YPL047W MPD1Q12404 318 aaKnown RBP-0.14□□□□□ -2.43
SGF11YPL047W RPS25AQ3E792 108 aaPredicted RBP-0.14□□□□□ -2.43
SGF11YPL047W YDL085C-AQ3E7B7 68 aaKnown RBP-0.14□□□□□ -2.43
SGF11YPL047W YPR014CQ6B0W2 109 aa-0.14□□□□□ -2.43
SGF11YPL047W HTB1P02293 131 aaKnown RBP-0.15□□□□□ -2.43
SGF11YPL047W HTB2P02294 131 aa-0.15□□□□□ -2.43
SGF11YPL047W SPS2P08459 502 aa-0.15□□□□□ -2.43
SGF11YPL047W YEL073CP39974 107 aa-0.15□□□□□ -2.43
SGF11YPL047W SBH1P52870 82 aa-0.15□□□□□ -2.43
SGF11YPL047W NQM1P53228 333 aaPredicted RBP-0.15□□□□□ -2.43
SGF11YPL047W RTC4P53850 401 aa-0.15□□□□□ -2.43
SGF11YPL047W VAM10Q08474 114 aa-0.15□□□□□ -2.43
SGF11YPL047W YCL012CQ8J0M4 134 aa-0.15□□□□□ -2.43
SGF11YPL047W MVB12P42939 101 aa-0.16□□□□□ -2.44
SGF11YPL047W VPS28Q02767 242 aa-0.16□□□□□ -2.44
SGF11YPL047W MRPS17Q03246 237 aaPredicted RBP-0.16□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms