RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W PHD1P36093 366 aa5.09□□□□□ -1.59
VPS5YOR069W GEP7P53171 287 aa5.09□□□□□ -1.59
VPS5YOR069W PRP11Q07350 266 aaPredicted RBP5.09□□□□□ -1.59
VPS5YOR069W YRA1Q12159 226 aaKnown RBP5.09□□□□□ -1.59
VPS5YOR069W GEP5Q12393 293 aa5.09□□□□□ -1.59
VPS5YOR069W TAD3Q9URQ3 322 aa5.09□□□□□ -1.59
VPS5YOR069W MSI1P13712 422 aa5.09□□□□□ -1.6
VPS5YOR069W CUP2P15315 225 aa5.09□□□□□ -1.6
VPS5YOR069W SRP21P32342 167 aa5.09□□□□□ -1.6
VPS5YOR069W HSP150P32478 413 aa5.09□□□□□ -1.6
VPS5YOR069W YKL107WP34251 309 aa5.09□□□□□ -1.6
VPS5YOR069W SWD3P38123 315 aa5.09□□□□□ -1.6
VPS5YOR069W DER1P38307 211 aa5.09□□□□□ -1.6
VPS5YOR069W SPG5P42933 373 aa5.09□□□□□ -1.6
VPS5YOR069W COQ5P49017 307 aa5.09□□□□□ -1.6
VPS5YOR069W YIP5P53108 310 aa5.09□□□□□ -1.6
VPS5YOR069W YGR050CP53231 118 aa5.09□□□□□ -1.6
VPS5YOR069W YGR126WP53274 230 aa5.09□□□□□ -1.6
VPS5YOR069W YNR048WP53740 393 aa5.09□□□□□ -1.6
VPS5YOR069W SEI1Q06058 285 aa5.09□□□□□ -1.6
VPS5YOR069W YFH1Q07540 174 aa5.09□□□□□ -1.6
VPS5YOR069W YER190C-BP0CX94 160 aa5.08□□□□□ -1.6
VPS5YOR069W YEL077W-AP0CX95 160 aa5.08□□□□□ -1.6
VPS5YOR069W YGR296C-BP0CX96 160 aa5.08□□□□□ -1.6
VPS5YOR069W YPL283W-BP0CX97 160 aa5.08□□□□□ -1.6
VPS5YOR069W YPR204C-AP0CX98 160 aa5.08□□□□□ -1.6
VPS5YOR069W YUH1P35127 236 aa5.08□□□□□ -1.6
VPS5YOR069W YHL044WP38727 235 aa5.08□□□□□ -1.6
VPS5YOR069W SHR5P41912 237 aa5.08□□□□□ -1.6
VPS5YOR069W HNT2P49775 206 aa5.08□□□□□ -1.6
VPS5YOR069W LPP1Q04396 274 aa5.08□□□□□ -1.6
VPS5YOR069W YOL118CQ08259 102 aa5.08□□□□□ -1.6
VPS5YOR069W ATG40Q99325 256 aa5.08□□□□□ -1.6
VPS5YOR069W YAL064W-BO13512 126 aa5.07□□□□□ -1.6
VPS5YOR069W SEC4P07560 215 aaKnown RBP5.07□□□□□ -1.6
VPS5YOR069W RPS27AP35997 82 aaKnown RBP5.07□□□□□ -1.6
VPS5YOR069W RPS27BP38711 82 aa5.07□□□□□ -1.6
VPS5YOR069W SEC24P40482 926 aaKnown RBP5.07□□□□□ -1.6
VPS5YOR069W MSY1P48527 492 aa5.07□□□□□ -1.6
VPS5YOR069W CPD1P53314 239 aa5.07□□□□□ -1.6
VPS5YOR069W TDA7P53882 636 aaPredicted RBP5.07□□□□□ -1.6
VPS5YOR069W DIC1Q06143 298 aa5.07□□□□□ -1.6
VPS5YOR069W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
VPS5YOR069W SWT1Q12104 458 aa5.07□□□□□ -1.6
VPS5YOR069W RKI1Q12189 258 aa5.07□□□□□ -1.6
VPS5YOR069W ATO3Q12359 275 aa5.07□□□□□ -1.6
VPS5YOR069W YOR192C-CQ3E736 78 aa5.07□□□□□ -1.6
VPS5YOR069W YHR214C-EQ8TGK0 99 aa5.07□□□□□ -1.6
VPS5YOR069W FLO9P39712 1322 aa5.07□□□□□ -1.6
VPS5YOR069W TOM1Q03280 3268 aa5.07□□□□□ -1.6
VPS5YOR069W RPP2BP02400 110 aaKnown RBP5.07□□□□□ -1.6
VPS5YOR069W YBR090CP38253 122 aa5.07□□□□□ -1.6
VPS5YOR069W GPP2P40106 250 aaKnown RBP5.07□□□□□ -1.6
VPS5YOR069W TDA4P47153 279 aa5.07□□□□□ -1.6
VPS5YOR069W DSK2P48510 373 aa5.07□□□□□ -1.6
VPS5YOR069W YLR363W-AQ3E747 85 aa5.07□□□□□ -1.6
VPS5YOR069W EMP70P32802 667 aa5.06□□□□□ -1.6
VPS5YOR069W YPT53P36019 220 aa5.06□□□□□ -1.6
VPS5YOR069W YKR070WP36151 352 aaKnown RBP5.06□□□□□ -1.6
VPS5YOR069W FYV4P38783 130 aaPredicted RBP5.06□□□□□ -1.6
VPS5YOR069W CCS1P40202 249 aaKnown RBP5.06□□□□□ -1.6
VPS5YOR069W TNA1P53322 534 aa5.06□□□□□ -1.6
VPS5YOR069W YNR061CP53747 219 aa5.06□□□□□ -1.6
VPS5YOR069W YNR064CP53750 290 aa5.06□□□□□ -1.6
VPS5YOR069W GRH1Q04410 372 aaKnown RBP5.06□□□□□ -1.6
VPS5YOR069W MRL1Q06815 381 aa5.06□□□□□ -1.6
VPS5YOR069W RDL2Q08742 149 aaKnown RBP5.06□□□□□ -1.6
VPS5YOR069W YOR292CQ08743 309 aa5.06□□□□□ -1.6
VPS5YOR069W FIT3Q08907 204 aa5.06□□□□□ -1.6
VPS5YOR069W FSF1Q12029 327 aaKnown RBP5.06□□□□□ -1.6
VPS5YOR069W POC4Q12245 148 aaPredicted RBP5.06□□□□□ -1.6
VPS5YOR069W YPT1P01123 206 aaKnown RBP5.06□□□□□ -1.6
VPS5YOR069W QRI5P32344 111 aa5.06□□□□□ -1.6
VPS5YOR069W ZRT1P32804 376 aa5.06□□□□□ -1.6
VPS5YOR069W YGL118CP53132 145 aa5.06□□□□□ -1.6
VPS5YOR069W YDR344CQ05510 147 aa5.06□□□□□ -1.6
VPS5YOR069W PRP46Q12417 451 aaPredicted RBP5.06□□□□□ -1.6
VPS5YOR069W HMRA1P0CY11 126 aa5.05□□□□□ -1.6
VPS5YOR069W URK1P27515 501 aa5.05□□□□□ -1.6
VPS5YOR069W UBS1P38290 277 aa5.05□□□□□ -1.6
VPS5YOR069W PSD1P39006 500 aa5.05□□□□□ -1.6
VPS5YOR069W YNL198CP40166 100 aa5.05□□□□□ -1.6
VPS5YOR069W PCL7P40186 285 aa5.05□□□□□ -1.6
VPS5YOR069W MOB1P40484 314 aa5.05□□□□□ -1.6
VPS5YOR069W WSC2P53832 503 aa5.05□□□□□ -1.6
VPS5YOR069W RIM9Q04734 239 aa5.05□□□□□ -1.6
VPS5YOR069W HRD1Q08109 551 aa5.05□□□□□ -1.6
VPS5YOR069W USB1Q12208 290 aaKnown RBP5.05□□□□□ -1.6
VPS5YOR069W POM34Q12445 299 aa5.05□□□□□ -1.6
VPS5YOR069W CYC7P00045 113 aa5.04□□□□□ -1.6
VPS5YOR069W RPS2P25443 254 aaKnown RBP5.04□□□□□ -1.6
VPS5YOR069W YBR220CP38318 560 aa5.04□□□□□ -1.6
VPS5YOR069W SHO1P40073 367 aa5.04□□□□□ -1.6
VPS5YOR069W YJR015WP47090 510 aa5.04□□□□□ -1.6
VPS5YOR069W ARP3P47117 449 aaKnown RBP5.04□□□□□ -1.6
VPS5YOR069W YJR115WP47152 169 aa5.04□□□□□ -1.6
VPS5YOR069W YDL183CP48569 320 aa5.04□□□□□ -1.6
VPS5YOR069W YNR071CP53757 342 aa5.04□□□□□ -1.6
VPS5YOR069W HNT3Q08702 217 aa5.04□□□□□ -1.6
VPS5YOR069W COX1P00401 534 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms