RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C UTP30P36144 274 aaKnown RBP2.46□□□□□ -2.02
SSN8YNL025C CSH1P38287 376 aa2.46□□□□□ -2.02
SSN8YNL025C RPB11P38902 120 aa2.46□□□□□ -2.02
SSN8YNL025C YER134CP40081 178 aa2.46□□□□□ -2.02
SSN8YNL025C RPR2P40571 144 aa2.46□□□□□ -2.02
SSN8YNL025C SYS1P41544 203 aa2.46□□□□□ -2.02
SSN8YNL025C ATG18P43601 500 aa2.46□□□□□ -2.02
SSN8YNL025C BNS1P50084 137 aa2.46□□□□□ -2.02
SSN8YNL025C SBH1P52870 82 aa2.46□□□□□ -2.02
SSN8YNL025C YGL118CP53132 145 aa2.46□□□□□ -2.02
SSN8YNL025C GRX5Q02784 150 aa2.46□□□□□ -2.02
SSN8YNL025C TVP15Q03860 143 aa2.46□□□□□ -2.02
SSN8YNL025C RNH202Q05635 350 aa2.46□□□□□ -2.02
SSN8YNL025C IZH2Q12442 317 aa2.46□□□□□ -2.02
SSN8YNL025C YAL063C-AQ3E791 96 aa2.46□□□□□ -2.02
SSN8YNL025C ISD11Q6Q560 94 aa2.46□□□□□ -2.02
SSN8YNL025C MLP2P40457 1679 aa2.46□□□□□ -2.02
SSN8YNL025C STU1P38198 1513 aa2.46□□□□□ -2.02
SSN8YNL025C VAR1P02381 398 aa2.45□□□□□ -2.02
SSN8YNL025C YLR156WP0CE96 114 aa2.45□□□□□ -2.02
SSN8YNL025C YLR159WP0CE97 114 aa2.45□□□□□ -2.02
SSN8YNL025C YLR161WP0CE98 114 aa2.45□□□□□ -2.02
SSN8YNL025C HSP12P22943 109 aaKnown RBP2.45□□□□□ -2.02
SSN8YNL025C SPT14P32363 452 aa2.45□□□□□ -2.02
SSN8YNL025C YBR090CP38253 122 aa2.45□□□□□ -2.02
SSN8YNL025C YHR140WP38842 239 aa2.45□□□□□ -2.02
SSN8YNL025C ASP1P38986 381 aaPredicted RBP2.45□□□□□ -2.02
SSN8YNL025C YND1P40009 630 aa2.45□□□□□ -2.02
SSN8YNL025C RPA43P46669 326 aa2.45□□□□□ -2.02
SSN8YNL025C MPC1P53157 130 aaKnown RBP2.45□□□□□ -2.02
SSN8YNL025C OSH6Q02201 448 aa2.45□□□□□ -2.02
SSN8YNL025C EMI1Q04406 187 aa2.45□□□□□ -2.02
SSN8YNL025C YDR115WQ04598 105 aa2.45□□□□□ -2.02
SSN8YNL025C UPS1Q05776 175 aa2.45□□□□□ -2.02
SSN8YNL025C YLR179CQ06252 201 aaKnown RBP2.45□□□□□ -2.02
SSN8YNL025C YOL014WQ08110 124 aa2.45□□□□□ -2.02
SSN8YNL025C YDL211CQ12121 372 aa2.45□□□□□ -2.02
SSN8YNL025C ATG5Q12380 294 aa2.45□□□□□ -2.02
SSN8YNL025C YMR230W-AQ3E7B5 62 aa2.45□□□□□ -2.02
SSN8YNL025C MYO4P32492 1471 aa2.45□□□□□ -2.02
SSN8YNL025C MYO2P19524 1574 aaKnown RBP2.44□□□□□ -2.02
SSN8YNL025C PDR10P51533 1564 aa2.44□□□□□ -2.02
SSN8YNL025C SMC4Q12267 1418 aa2.44□□□□□ -2.02
SSN8YNL025C CPA1P07258 411 aaKnown RBP2.44□□□□□ -2.02
SSN8YNL025C YER039C-AP0CD97 72 aa2.44□□□□□ -2.02
SSN8YNL025C RCN1P36054 211 aa2.44□□□□□ -2.02
SSN8YNL025C MSA2P36157 363 aa2.44□□□□□ -2.02
SSN8YNL025C HTD2P38790 280 aaKnown RBP2.44□□□□□ -2.02
SSN8YNL025C PTH1P38876 190 aaKnown RBP2.44□□□□□ -2.02
SSN8YNL025C YEA6P39953 335 aa2.44□□□□□ -2.02
SSN8YNL025C GON7P46984 123 aa2.44□□□□□ -2.02
SSN8YNL025C DSK2P48510 373 aa2.44□□□□□ -2.02
SSN8YNL025C SPG1P50088 95 aa2.44□□□□□ -2.02
SSN8YNL025C EMC4P53073 190 aa2.44□□□□□ -2.02
SSN8YNL025C YGL230CP53074 147 aa2.44□□□□□ -2.02
SSN8YNL025C NHP10Q03435 203 aa2.44□□□□□ -2.02
SSN8YNL025C TIM22Q12328 207 aa2.44□□□□□ -2.02
SSN8YNL025C MMS1Q06211 1407 aa2.43□□□□□ -2.02
SSN8YNL025C RAD6P06104 172 aa2.43□□□□□ -2.02
SSN8YNL025C ADK1P07170 222 aaKnown RBP2.43□□□□□ -2.02
SSN8YNL025C YGL041W-AP0C5N3 154 aa2.43□□□□□ -2.02
SSN8YNL025C SPT15P13393 240 aaKnown RBP2.43□□□□□ -2.02
SSN8YNL025C AHT1P29589 182 aa2.43□□□□□ -2.02
SSN8YNL025C ZRT3P34240 503 aa2.43□□□□□ -2.02
SSN8YNL025C NSA2P40078 261 aaKnown RBP2.43□□□□□ -2.02
SSN8YNL025C LSM8P47093 109 aaKnown RBP2.43□□□□□ -2.02
SSN8YNL025C GEP7P53171 287 aa2.43□□□□□ -2.02
SSN8YNL025C WSC2P53832 503 aa2.43□□□□□ -2.02
SSN8YNL025C BUD25P85052 153 aa2.43□□□□□ -2.02
SSN8YNL025C YPL039WQ03080 316 aa2.43□□□□□ -2.02
SSN8YNL025C MRPS8Q03799 155 aa2.43□□□□□ -2.02
SSN8YNL025C API2Q04413 109 aa2.43□□□□□ -2.02
SSN8YNL025C RRT7Q07829 113 aa2.43□□□□□ -2.02
SSN8YNL025C MCP1Q12106 302 aa2.43□□□□□ -2.02
SSN8YNL025C HUT1Q12520 339 aa2.43□□□□□ -2.02
SSN8YNL025C POL1P13382 1468 aa2.43□□□□□ -2.02
SSN8YNL025C SSK2P53599 1579 aa2.43□□□□□ -2.02
SSN8YNL025C SPT6P23615 1451 aaKnown RBP2.42□□□□□ -2.02
SSN8YNL025C REP2P03872 296 aa2.42□□□□□ -2.02
SSN8YNL025C GPA2P10823 449 aa2.42□□□□□ -2.02
SSN8YNL025C UMP1P38293 148 aa2.42□□□□□ -2.02
SSN8YNL025C YNL200CP40165 246 aaKnown RBP2.42□□□□□ -2.02
SSN8YNL025C PHS1P40857 217 aa2.42□□□□□ -2.02
SSN8YNL025C NSE4P43124 402 aa2.42□□□□□ -2.02
SSN8YNL025C YFL019CP43576 117 aa2.42□□□□□ -2.02
SSN8YNL025C PGU1P47180 361 aa2.42□□□□□ -2.02
SSN8YNL025C YKR005CQ02203 525 aa2.42□□□□□ -2.02
SSN8YNL025C ELC1Q03071 99 aa2.42□□□□□ -2.02
SSN8YNL025C YMR244WQ04018 355 aa2.42□□□□□ -2.02
SSN8YNL025C YLR042CQ07990 161 aa2.42□□□□□ -2.02
SSN8YNL025C ODC2Q99297 307 aa2.42□□□□□ -2.02
SSN8YNL025C DDP1Q99321 188 aaKnown RBP2.42□□□□□ -2.02
SSN8YNL025C RAS2P01120 322 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C RPL9AP05738 191 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C ATP15P21306 62 aa2.41□□□□□ -2.02
SSN8YNL025C ARO2P28777 376 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C YBL059WP34224 193 aa2.41□□□□□ -2.02
SSN8YNL025C YRA2P36036 203 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SSN8YNL025C RPL14AP36105 138 aaKnown RBP2.41□□□□□ -2.02
SSN8YNL025C YKR070WP36151 352 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms