RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YBT1P32386 1661 aa2.77□□□□□ -1.97
CUS1YMR240C MBF1O14467 151 aaKnown RBP2.76□□□□□ -1.97
CUS1YMR240C CNB1P25296 175 aa2.76□□□□□ -1.97
CUS1YMR240C YCR023CP25351 611 aa2.76□□□□□ -1.97
CUS1YMR240C YCR090CP25654 182 aaKnown RBP2.76□□□□□ -1.97
CUS1YMR240C UBC8P28263 218 aa2.76□□□□□ -1.97
CUS1YMR240C TVP38P36164 337 aa2.76□□□□□ -1.97
CUS1YMR240C YHR022CP38763 256 aa2.76□□□□□ -1.97
CUS1YMR240C TIR3P40552 269 aa2.76□□□□□ -1.97
CUS1YMR240C NTE1Q04958 1679 aa2.76□□□□□ -1.97
CUS1YMR240C RPA190P10964 1664 aaKnown RBP2.75□□□□□ -1.97
CUS1YMR240C RPO21P04050 1733 aaKnown RBP2.75□□□□□ -1.97
CUS1YMR240C CKS1P20486 150 aaKnown RBP2.75□□□□□ -1.97
CUS1YMR240C SNC2P33328 115 aa2.75□□□□□ -1.97
CUS1YMR240C HSK3P69852 69 aa2.75□□□□□ -1.97
CUS1YMR240C CYT2Q00873 224 aa2.75□□□□□ -1.97
CUS1YMR240C GPI17Q04080 534 aa2.75□□□□□ -1.97
CUS1YMR240C DGA1Q08650 418 aa2.75□□□□□ -1.97
CUS1YMR240C YCF1P39109 1515 aaKnown RBP2.75□□□□□ -1.97
CUS1YMR240C SKI3P17883 1432 aaKnown RBP2.75□□□□□ -1.97
CUS1YMR240C YOR1P53049 1477 aa2.74□□□□□ -1.97
CUS1YMR240C DDI2P0CH63 225 aa2.74□□□□□ -1.97
CUS1YMR240C DDI3P0CH64 225 aa2.74□□□□□ -1.97
CUS1YMR240C NHP6AP11632 93 aaKnown RBP2.74□□□□□ -1.97
CUS1YMR240C YKL102CP34249 101 aa2.74□□□□□ -1.97
CUS1YMR240C YET1P35723 206 aa2.74□□□□□ -1.97
CUS1YMR240C YGR201CP42936 225 aa2.74□□□□□ -1.97
CUS1YMR240C MPD1Q12404 318 aaKnown RBP2.74□□□□□ -1.97
CUS1YMR240C BOL1Q3E793 110 aa2.74□□□□□ -1.97
CUS1YMR240C YRF1-1P0CX20 1796 aa2.74□□□□□ -1.97
CUS1YMR240C YRF1-5P0CX21 1796 aa2.74□□□□□ -1.97
CUS1YMR240C YRF1-8P0CX22 1796 aa2.74□□□□□ -1.97
CUS1YMR240C RPO31P04051 1460 aa2.74□□□□□ -1.97
CUS1YMR240C ATP15P21306 62 aa2.73□□□□□ -1.97
CUS1YMR240C PEX34P25584 144 aa2.73□□□□□ -1.97
CUS1YMR240C IPI1P38803 334 aaPredicted RBP2.73□□□□□ -1.97
CUS1YMR240C AIM2P39721 246 aa2.73□□□□□ -1.97
CUS1YMR240C RBL2P48606 106 aaKnown RBP2.73□□□□□ -1.97
CUS1YMR240C VMA10P48836 114 aaKnown RBP2.73□□□□□ -1.97
CUS1YMR240C BOL2P53082 120 aa2.73□□□□□ -1.97
CUS1YMR240C ARO8P53090 500 aaKnown RBP2.73□□□□□ -1.97
CUS1YMR240C YGL101WP53144 215 aa2.73□□□□□ -1.97
CUS1YMR240C CSN9Q03981 162 aa2.73□□□□□ -1.97
CUS1YMR240C SPC24Q04477 213 aa2.73□□□□□ -1.97
CUS1YMR240C FSF1Q12029 327 aaKnown RBP2.73□□□□□ -1.97
CUS1YMR240C YHR086W-AQ3E746 53 aa2.73□□□□□ -1.97
CUS1YMR240C SLM6P38343 150 aa2.72□□□□□ -1.97
CUS1YMR240C AYR1P40471 297 aa2.72□□□□□ -1.97
CUS1YMR240C PGA1P53896 198 aa2.72□□□□□ -1.97
CUS1YMR240C YLR046CQ12253 270 aa2.72□□□□□ -1.97
CUS1YMR240C MYO4P32492 1471 aa2.72□□□□□ -1.97
CUS1YMR240C PDR15Q04182 1529 aaKnown RBP2.72□□□□□ -1.97
CUS1YMR240C YBR285WP38354 144 aa2.71□□□□□ -1.98
CUS1YMR240C DSE2P38844 325 aa2.71□□□□□ -1.98
CUS1YMR240C YNL217WP40152 326 aa2.71□□□□□ -1.98
CUS1YMR240C ARP3P47117 449 aaKnown RBP2.71□□□□□ -1.98
CUS1YMR240C HHT1P61830 136 aa2.71□□□□□ -1.98
CUS1YMR240C RFU1Q08003 200 aa2.71□□□□□ -1.98
CUS1YMR240C YPR202WQ08993 238 aa2.71□□□□□ -1.98
CUS1YMR240C YLR361C-AQ3E795 98 aa2.71□□□□□ -1.98
CUS1YMR240C UFD4P33202 1483 aa2.71□□□□□ -1.98
CUS1YMR240C CDC25P04821 1589 aa2.71□□□□□ -1.98
CUS1YMR240C SUA7P29055 345 aaPredicted RBP2.7□□□□□ -1.98
CUS1YMR240C APQ12P40532 138 aa2.7□□□□□ -1.98
CUS1YMR240C PHB1P40961 287 aa2.7□□□□□ -1.98
CUS1YMR240C YDR274CP87283 123 aa2.7□□□□□ -1.98
CUS1YMR240C DYN2Q02647 92 aa2.7□□□□□ -1.98
CUS1YMR240C PST2Q12335 198 aaKnown RBP2.7□□□□□ -1.98
CUS1YMR240C TOP2P06786 1428 aaKnown RBP2.7□□□□□ -1.98
CUS1YMR240C SNQ2P32568 1501 aaKnown RBP2.7□□□□□ -1.98
CUS1YMR240C YIL177CP40434 1758 aa2.7□□□□□ -1.98
CUS1YMR240C YJL225CP40889 1758 aa2.7□□□□□ -1.98
CUS1YMR240C PDR18P53756 1333 aa2.69□□□□□ -1.98
CUS1YMR240C UBI4P0CG63 381 aaKnown RBP2.69□□□□□ -1.98
CUS1YMR240C MDH2P22133 377 aa2.69□□□□□ -1.98
CUS1YMR240C SPO13P23624 291 aa2.69□□□□□ -1.98
CUS1YMR240C OCH1P31755 480 aa2.69□□□□□ -1.98
CUS1YMR240C SHE2P36068 246 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
CUS1YMR240C AVT2P39981 480 aa2.69□□□□□ -1.98
CUS1YMR240C YEA4P40004 342 aa2.69□□□□□ -1.98
CUS1YMR240C RFC2P40348 353 aa2.69□□□□□ -1.98
CUS1YMR240C SKI6P46948 246 aaPredicted RBP2.69□□□□□ -1.98
CUS1YMR240C YJR015WP47090 510 aa2.69□□□□□ -1.98
CUS1YMR240C YJR111CP47148 283 aaKnown RBP2.69□□□□□ -1.98
CUS1YMR240C XPT1P47165 209 aa2.69□□□□□ -1.98
CUS1YMR240C YOR342CQ12182 319 aa2.69□□□□□ -1.98
CUS1YMR240C NUP170P38181 1502 aa2.69□□□□□ -1.98
CUS1YMR240C TY3B-GQ99315 1547 aa2.69□□□□□ -1.98
CUS1YMR240C SMC4Q12267 1418 aa2.69□□□□□ -1.98
CUS1YMR240C RPL2AP0CX45 254 aaKnown RBP2.68□□□□□ -1.98
CUS1YMR240C RPL2BP0CX46 254 aaKnown RBP2.68□□□□□ -1.98
CUS1YMR240C PEP8P40335 379 aa2.68□□□□□ -1.98
CUS1YMR240C TDA4P47153 279 aa2.68□□□□□ -1.98
CUS1YMR240C YNR077CP53758 84 aa2.68□□□□□ -1.98
CUS1YMR240C LSM3P57743 89 aaKnown RBP2.68□□□□□ -1.98
CUS1YMR240C UBC7Q02159 165 aa2.68□□□□□ -1.98
CUS1YMR240C YDL180WQ12301 547 aa2.68□□□□□ -1.98
CUS1YMR240C ODC2Q99297 307 aa2.68□□□□□ -1.98
CUS1YMR240C TRM732Q03496 1420 aa2.68□□□□□ -1.98
CUS1YMR240C RAD50P12753 1312 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms