RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YPR108W-AQ3E7B3 70 aa3.52□□□□□ -1.85
CCS1YMR038C HUG1Q6Q5K6 68 aa3.52□□□□□ -1.85
CCS1YMR038C PET54P10834 293 aa3.51□□□□□ -1.85
CCS1YMR038C BMT5P40493 336 aa3.51□□□□□ -1.85
CCS1YMR038C YFR035CP43608 114 aa3.51□□□□□ -1.85
CCS1YMR038C BNA6P43619 295 aa3.51□□□□□ -1.85
CCS1YMR038C YJR012CP47087 207 aa3.51□□□□□ -1.85
CCS1YMR038C YDR274CP87283 123 aa3.51□□□□□ -1.85
CCS1YMR038C NOP1P15646 327 aaKnown RBP3.5□□□□□ -1.85
CCS1YMR038C YMR31P19955 123 aa3.5□□□□□ -1.85
CCS1YMR038C YBL059WP34224 193 aa3.5□□□□□ -1.85
CCS1YMR038C NRG2P38082 220 aa3.5□□□□□ -1.85
CCS1YMR038C RIB5P38145 238 aa3.5□□□□□ -1.85
CCS1YMR038C GEP4P38812 185 aa3.5□□□□□ -1.85
CCS1YMR038C MPC2P38857 129 aa3.5□□□□□ -1.85
CCS1YMR038C CAT5P41735 233 aa3.5□□□□□ -1.85
CCS1YMR038C CAX4P53223 239 aa3.5□□□□□ -1.85
CCS1YMR038C YLR031WQ07978 186 aa3.5□□□□□ -1.85
CCS1YMR038C UBA3Q99344 299 aa3.5□□□□□ -1.85
CCS1YMR038C RIB7P33312 244 aa3.49□□□□□ -1.85
CCS1YMR038C SRY1P36007 326 aa3.49□□□□□ -1.85
CCS1YMR038C YPT31P38555 223 aaKnown RBP3.49□□□□□ -1.85
CCS1YMR038C GOS1P38736 223 aa3.49□□□□□ -1.85
CCS1YMR038C HTD2P38790 280 aaKnown RBP3.49□□□□□ -1.85
CCS1YMR038C YGR210CP42942 411 aa3.49□□□□□ -1.85
CCS1YMR038C ATG18P43601 500 aa3.49□□□□□ -1.85
CCS1YMR038C CPD1P53314 239 aa3.49□□□□□ -1.85
CCS1YMR038C YML018CQ03730 393 aa3.49□□□□□ -1.85
CCS1YMR038C YMR130WQ04223 302 aa3.49□□□□□ -1.85
CCS1YMR038C KEI1Q06346 221 aa3.49□□□□□ -1.85
CCS1YMR038C MED4Q12343 284 aa3.49□□□□□ -1.85
CCS1YMR038C BOL1Q3E793 110 aa3.49□□□□□ -1.85
CCS1YMR038C TAR1Q8TGM6 124 aa3.49□□□□□ -1.85
CCS1YMR038C HHF1P02309 103 aaKnown RBP3.48□□□□□ -1.85
CCS1YMR038C TRR1P29509 319 aaKnown RBP3.48□□□□□ -1.85
CCS1YMR038C HOM6P31116 359 aaKnown RBP3.48□□□□□ -1.85
CCS1YMR038C FMT1P32785 401 aa3.48□□□□□ -1.85
CCS1YMR038C POP2P39008 433 aa3.48□□□□□ -1.85
CCS1YMR038C YER137CP40083 148 aaKnown RBP3.48□□□□□ -1.85
CCS1YMR038C RFC2P40348 353 aa3.48□□□□□ -1.85
CCS1YMR038C LST8P41318 303 aa3.48□□□□□ -1.85
CCS1YMR038C YGR219WP53307 113 aa3.48□□□□□ -1.85
CCS1YMR038C ERV29P53337 310 aa3.48□□□□□ -1.85
CCS1YMR038C TDA1Q03533 586 aa3.48□□□□□ -1.85
CCS1YMR038C PEX27Q08580 376 aa3.48□□□□□ -1.85
CCS1YMR038C YPR013CQ12145 317 aa3.48□□□□□ -1.85
CCS1YMR038C SOD1P00445 154 aaKnown RBP3.47□□□□□ -1.85
CCS1YMR038C PET494P07390 489 aaPredicted RBP3.47□□□□□ -1.85
CCS1YMR038C SRL3P36167 246 aa3.47□□□□□ -1.85
CCS1YMR038C ATP3P38077 311 aaKnown RBP3.47□□□□□ -1.85
CCS1YMR038C GPX2P38143 162 aa3.47□□□□□ -1.85
CCS1YMR038C QDR3P38227 689 aa3.47□□□□□ -1.85
CCS1YMR038C MED8P38304 223 aa3.47□□□□□ -1.85
CCS1YMR038C YHR138CP38841 114 aaPredicted RBP3.47□□□□□ -1.85
CCS1YMR038C GAT4P40569 121 aa3.47□□□□□ -1.85
CCS1YMR038C RPA34P47006 233 aaPredicted RBP3.47□□□□□ -1.85
CCS1YMR038C GPI15P53961 229 aa3.47□□□□□ -1.85
CCS1YMR038C RCF1Q03713 159 aa3.47□□□□□ -1.85
CCS1YMR038C VBA1Q04301 562 aa3.47□□□□□ -1.85
CCS1YMR038C PEX10Q05568 337 aa3.47□□□□□ -1.85
CCS1YMR038C HRD1Q08109 551 aa3.47□□□□□ -1.85
CCS1YMR038C DCP1Q12517 231 aaPredicted RBP3.47□□□□□ -1.85
CCS1YMR038C VPS63O13549 108 aa3.46□□□□□ -1.86
CCS1YMR038C MIR1P23641 311 aaKnown RBP3.46□□□□□ -1.86
CCS1YMR038C ALK2P32789 676 aaPredicted RBP3.46□□□□□ -1.86
CCS1YMR038C MRPL27P36526 146 aaPredicted RBP3.46□□□□□ -1.86
CCS1YMR038C MIC12P38341 106 aa3.46□□□□□ -1.86
CCS1YMR038C YHR122WP38829 231 aa3.46□□□□□ -1.86
CCS1YMR038C YAR068WP39564 161 aa3.46□□□□□ -1.86
CCS1YMR038C YNL194CP40169 301 aa3.46□□□□□ -1.86
CCS1YMR038C DFG10P40526 253 aa3.46□□□□□ -1.86
CCS1YMR038C GVP36P40531 326 aaKnown RBP3.46□□□□□ -1.86
CCS1YMR038C ERG25P53045 309 aa3.46□□□□□ -1.86
CCS1YMR038C ERV25P54837 211 aaKnown RBP3.46□□□□□ -1.86
CCS1YMR038C MEH1Q02205 184 aa3.46□□□□□ -1.86
CCS1YMR038C MGR3Q04472 501 aa3.46□□□□□ -1.86
CCS1YMR038C RRG8Q06109 277 aa3.46□□□□□ -1.86
CCS1YMR038C RDS3Q06835 107 aaPredicted RBP3.46□□□□□ -1.86
CCS1YMR038C YOR283WQ12040 230 aaKnown RBP3.46□□□□□ -1.86
CCS1YMR038C SUS1Q6WNK7 96 aa3.46□□□□□ -1.86
CCS1YMR038C PET20Q99373 253 aa3.46□□□□□ -1.86
CCS1YMR038C CAP2P13517 287 aa3.45□□□□□ -1.86
CCS1YMR038C ARO2P28777 376 aaKnown RBP3.45□□□□□ -1.86
CCS1YMR038C PDC2P32896 925 aa3.45□□□□□ -1.86
CCS1YMR038C SIM1P40472 476 aa3.45□□□□□ -1.86
CCS1YMR038C ARP3P47117 449 aaKnown RBP3.45□□□□□ -1.86
CCS1YMR038C SWT21P53873 357 aaPredicted RBP3.45□□□□□ -1.86
CCS1YMR038C OCA2P53949 197 aa3.45□□□□□ -1.86
CCS1YMR038C BET5Q03630 159 aa3.45□□□□□ -1.86
CCS1YMR038C THI74Q04083 370 aa3.45□□□□□ -1.86
CCS1YMR038C FSH2Q05015 223 aa3.45□□□□□ -1.86
CCS1YMR038C SYM1Q06563 197 aa3.45□□□□□ -1.86
CCS1YMR038C ATG5Q12380 294 aa3.45□□□□□ -1.86
CCS1YMR038C PRM4Q12498 284 aa3.45□□□□□ -1.86
CCS1YMR038C TRP1P00912 224 aa3.44□□□□□ -1.86
CCS1YMR038C POP8P38208 133 aa3.44□□□□□ -1.86
CCS1YMR038C COS8P38723 381 aa3.44□□□□□ -1.86
CCS1YMR038C HPA3P39979 161 aa3.44□□□□□ -1.86
CCS1YMR038C SNU13P39990 126 aaKnown RBP3.44□□□□□ -1.86
CCS1YMR038C AGX1P43567 385 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 92.3 ms