RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C ATG40Q99325 256 aa2.05□□□□□ -2.08
VPS9YML097C PBI2P0CT04 75 aaKnown RBP2.04□□□□□ -2.08
VPS9YML097C DAN1P47178 298 aa2.04□□□□□ -2.08
VPS9YML097C HHT1P61830 136 aa2.04□□□□□ -2.08
VPS9YML097C VPS28Q02767 242 aa2.04□□□□□ -2.08
VPS9YML097C SHH3Q04487 196 aa2.04□□□□□ -2.08
VPS9YML097C IRC23Q08416 157 aa2.04□□□□□ -2.08
VPS9YML097C YLR236CA0A023PZG4 107 aa2.03□□□□□ -2.08
VPS9YML097C NSA2P40078 261 aaKnown RBP2.03□□□□□ -2.08
VPS9YML097C XPT1P47165 209 aa2.03□□□□□ -2.08
VPS9YML097C ORM1P53224 222 aa2.03□□□□□ -2.08
VPS9YML097C RAD28Q12021 506 aa2.03□□□□□ -2.08
VPS9YML097C YOR214CQ12282 236 aa2.03□□□□□ -2.08
VPS9YML097C RPL30P14120 105 aaKnown RBP2.02□□□□□ -2.09
VPS9YML097C SHE2P36068 246 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
VPS9YML097C APQ12P40532 138 aa2.02□□□□□ -2.09
VPS9YML097C DAD3P69850 94 aa2.02□□□□□ -2.09
VPS9YML097C CUE4Q04201 117 aaPredicted RBP2.02□□□□□ -2.09
VPS9YML097C YHR086W-AQ3E746 53 aa2.02□□□□□ -2.09
VPS9YML097C IDP1P21954 428 aaKnown RBP2.01□□□□□ -2.09
VPS9YML097C PTC1P35182 281 aa2.01□□□□□ -2.09
VPS9YML097C SFK1P35735 353 aa2.01□□□□□ -2.09
VPS9YML097C YBR209WP38311 105 aa2.01□□□□□ -2.09
VPS9YML097C YBR220CP38318 560 aa2.01□□□□□ -2.09
VPS9YML097C FYV4P38783 130 aaPredicted RBP2.01□□□□□ -2.09
VPS9YML097C GAA1P39012 614 aa2.01□□□□□ -2.09
VPS9YML097C YJR015WP47090 510 aa2.01□□□□□ -2.09
VPS9YML097C SAY1P53324 424 aa2.01□□□□□ -2.09
VPS9YML097C YKR005CQ02203 525 aa2.01□□□□□ -2.09
VPS9YML097C ATP20Q12233 115 aa2.01□□□□□ -2.09
VPS9YML097C TRM3Q07527 1436 aa2.01□□□□□ -2.09
VPS9YML097C RAD6P06104 172 aa2□□□□□ -2.09
VPS9YML097C DDI2P0CH63 225 aa2□□□□□ -2.09
VPS9YML097C DDI3P0CH64 225 aa2□□□□□ -2.09
VPS9YML097C HSP30P25619 332 aa2□□□□□ -2.09
VPS9YML097C SVP26P38869 228 aa2□□□□□ -2.09
VPS9YML097C RIO2P40160 425 aaKnown RBP2□□□□□ -2.09
VPS9YML097C YGL193CP53097 103 aa2□□□□□ -2.09
VPS9YML097C YNL033WP53964 284 aa2□□□□□ -2.09
VPS9YML097C CGI121Q03705 181 aaKnown RBP2□□□□□ -2.09
VPS9YML097C RAV2Q03956 351 aa2□□□□□ -2.09
VPS9YML097C SML1Q04964 104 aa2□□□□□ -2.09
VPS9YML097C ATP5P09457 212 aa1.99□□□□□ -2.09
VPS9YML097C UBC8P28263 218 aa1.99□□□□□ -2.09
VPS9YML097C ACP1P32463 125 aa1.99□□□□□ -2.09
VPS9YML097C NUF2P33895 451 aa1.99□□□□□ -2.09
VPS9YML097C IPI1P38803 334 aaPredicted RBP1.99□□□□□ -2.09
VPS9YML097C DSE2P38844 325 aa1.99□□□□□ -2.09
VPS9YML097C YER135CP40082 130 aa1.99□□□□□ -2.09
VPS9YML097C YPL073CP40323 161 aa1.99□□□□□ -2.09
VPS9YML097C DLS1P40366 167 aa1.99□□□□□ -2.09
VPS9YML097C GLR1P41921 483 aaKnown RBP1.99□□□□□ -2.09
VPS9YML097C YFR054CP43622 192 aa1.99□□□□□ -2.09
VPS9YML097C MOG1P47123 218 aa1.99□□□□□ -2.09
VPS9YML097C PKR1Q03880 122 aaKnown RBP1.99□□□□□ -2.09
VPS9YML097C MSB2P32334 1306 aa1.99□□□□□ -2.09
VPS9YML097C RRT1P38192 103 aa1.98□□□□□ -2.09
VPS9YML097C VMA22P38784 181 aa1.98□□□□□ -2.09
VPS9YML097C YEL028WP39989 153 aa1.98□□□□□ -2.09
VPS9YML097C YNL200CP40165 246 aaKnown RBP1.98□□□□□ -2.09
VPS9YML097C KNH1P50112 268 aa1.98□□□□□ -2.09
VPS9YML097C FLO9P39712 1322 aa1.98□□□□□ -2.09
VPS9YML097C UPS2P35200 230 aa1.98□□□□□ -2.09
VPS9YML097C FIP1P45976 327 aa1.98□□□□□ -2.09
VPS9YML097C PIR1Q03178 341 aa1.98□□□□□ -2.09
VPS9YML097C YPR174CQ06616 221 aaPredicted RBP1.98□□□□□ -2.09
VPS9YML097C YPR013CQ12145 317 aa1.98□□□□□ -2.09
VPS9YML097C SEC11P15367 167 aa1.97□□□□□ -2.09
VPS9YML097C TFC1P32367 649 aa1.97□□□□□ -2.09
VPS9YML097C NRG2P38082 220 aa1.97□□□□□ -2.09
VPS9YML097C CYC2P38909 366 aa1.97□□□□□ -2.09
VPS9YML097C GIM4P40005 111 aaKnown RBP1.97□□□□□ -2.09
VPS9YML097C YGR201CP42936 225 aa1.97□□□□□ -2.09
VPS9YML097C SYM1Q06563 197 aa1.97□□□□□ -2.09
VPS9YML097C MDH2P22133 377 aa1.96□□□□□ -2.1
VPS9YML097C HTD2P38790 280 aaKnown RBP1.96□□□□□ -2.1
VPS9YML097C CCC1P47818 322 aa1.96□□□□□ -2.1
VPS9YML097C YGL204CP53089 101 aa1.96□□□□□ -2.1
VPS9YML097C POP3P53833 195 aaPredicted RBP1.96□□□□□ -2.1
VPS9YML097C YDR391CQ04170 232 aa1.96□□□□□ -2.1
VPS9YML097C RIM9Q04734 239 aa1.96□□□□□ -2.1
VPS9YML097C SPC2Q04969 178 aa1.96□□□□□ -2.1
VPS9YML097C RNH202Q05635 350 aa1.96□□□□□ -2.1
VPS9YML097C PRP11Q07350 266 aaPredicted RBP1.96□□□□□ -2.1
VPS9YML097C HRD1Q08109 551 aa1.96□□□□□ -2.1
VPS9YML097C GSP2P32836 220 aaKnown RBP1.95□□□□□ -2.1
VPS9YML097C GRX5Q02784 150 aa1.95□□□□□ -2.1
VPS9YML097C ANT1Q06497 328 aa1.95□□□□□ -2.1
VPS9YML097C DUR1,2P32528 1835 aaKnown RBP1.94□□□□□ -2.1
VPS9YML097C YKR045CP36138 183 aa1.94□□□□□ -2.1
VPS9YML097C POP7P38291 140 aa1.94□□□□□ -2.1
VPS9YML097C YHL018WP38744 120 aaPredicted RBP1.94□□□□□ -2.1
VPS9YML097C PEP8P40335 379 aa1.94□□□□□ -2.1
VPS9YML097C YGR042WP53227 271 aa1.94□□□□□ -2.1
VPS9YML097C BUD25P85052 153 aa1.94□□□□□ -2.1
VPS9YML097C UPS3Q04006 179 aa1.94□□□□□ -2.1
VPS9YML097C COX8P04039 78 aa1.93□□□□□ -2.1
VPS9YML097C PHO85P17157 305 aa1.93□□□□□ -2.1
VPS9YML097C SPT14P32363 452 aa1.93□□□□□ -2.1
VPS9YML097C YJL218WP40892 196 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms