RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W CRH1P53301 507 aa4.17□□□□□ -1.74
TIM54YJL054W SSU72P53538 206 aaPredicted RBP4.17□□□□□ -1.74
TIM54YJL054W LSM7P53905 115 aaKnown RBP4.17□□□□□ -1.74
TIM54YJL054W FSH2Q05015 223 aa4.17□□□□□ -1.74
TIM54YJL054W YDL242WQ07746 117 aa4.17□□□□□ -1.74
TIM54YJL054W YCP4P25349 247 aaKnown RBP4.16□□□□□ -1.74
TIM54YJL054W YPS1P32329 569 aa4.16□□□□□ -1.74
TIM54YJL054W MIC12P38341 106 aa4.16□□□□□ -1.74
TIM54YJL054W YPT31P38555 223 aaKnown RBP4.16□□□□□ -1.74
TIM54YJL054W ECM27P47144 725 aa4.16□□□□□ -1.74
TIM54YJL054W CWC23P52868 283 aaPredicted RBP4.16□□□□□ -1.74
TIM54YJL054W CPD1P53314 239 aa4.16□□□□□ -1.74
TIM54YJL054W RAD28Q12021 506 aa4.16□□□□□ -1.74
TIM54YJL054W YGL258W-AQ3E740 77 aa4.16□□□□□ -1.74
TIM54YJL054W YBR255C-AQ3E776 120 aa4.16□□□□□ -1.74
TIM54YJL054W SOD1P00445 154 aaKnown RBP4.15□□□□□ -1.74
TIM54YJL054W YCR016WP25617 290 aaKnown RBP4.15□□□□□ -1.74
TIM54YJL054W FLO5P38894 1075 aa4.15□□□□□ -1.74
TIM54YJL054W BFR1P38934 470 aaKnown RBP RIP-Chip data4.15□□□□□ -1.74not detected
TIM54YJL054W YMR181CQ03231 154 aa4.15□□□□□ -1.74
TIM54YJL054W GRH1Q04410 372 aaKnown RBP4.15□□□□□ -1.74
TIM54YJL054W PHO92Q06390 306 aa4.15□□□□□ -1.74
TIM54YJL054W IRC23Q08416 157 aa4.15□□□□□ -1.74
TIM54YJL054W RDI1Q12434 202 aa4.15□□□□□ -1.74
TIM54YJL054W CAP2P13517 287 aa4.14□□□□□ -1.75
TIM54YJL054W TAL1P15019 335 aaKnown RBP4.14□□□□□ -1.75
TIM54YJL054W ECM33P38248 429 aaKnown RBP4.14□□□□□ -1.75
TIM54YJL054W ERV15P38312 142 aa4.14□□□□□ -1.75
TIM54YJL054W MPC2P38857 129 aa4.14□□□□□ -1.75
TIM54YJL054W ACT1P60010 375 aaKnown RBP4.14□□□□□ -1.75
TIM54YJL054W EST3Q03096 181 aa4.14□□□□□ -1.75
TIM54YJL054W ATG5Q12380 294 aa4.14□□□□□ -1.75
TIM54YJL054W NHP6BP11633 99 aaKnown RBP4.13□□□□□ -1.75
TIM54YJL054W AUA1P32450 94 aa4.13□□□□□ -1.75
TIM54YJL054W DOG2P38773 246 aa4.13□□□□□ -1.75
TIM54YJL054W DOG1P38774 246 aa4.13□□□□□ -1.75
TIM54YJL054W NIF3P53081 288 aa4.13□□□□□ -1.75
TIM54YJL054W SWT21P53873 357 aaPredicted RBP4.13□□□□□ -1.75
TIM54YJL054W YDR274CP87283 123 aa4.13□□□□□ -1.75
TIM54YJL054W MSC3Q05812 728 aa4.13□□□□□ -1.75
TIM54YJL054W YCT1Q12235 531 aa4.13□□□□□ -1.75
TIM54YJL054W PET494P07390 489 aaPredicted RBP4.12□□□□□ -1.75
TIM54YJL054W ALK2P32789 676 aaPredicted RBP4.12□□□□□ -1.75
TIM54YJL054W PDC2P32896 925 aa4.12□□□□□ -1.75
TIM54YJL054W YAR068WP39564 161 aa4.12□□□□□ -1.75
TIM54YJL054W DFG10P40526 253 aa4.12□□□□□ -1.75
TIM54YJL054W YPI1P43587 155 aa4.12□□□□□ -1.75
TIM54YJL054W YGR050CP53231 118 aa4.12□□□□□ -1.75
TIM54YJL054W PEX10Q05568 337 aa4.12□□□□□ -1.75
TIM54YJL054W PRM4Q12498 284 aa4.12□□□□□ -1.75
TIM54YJL054W CYC3P06182 269 aa4.12□□□□□ -1.75
TIM54YJL054W SPS2P08459 502 aa4.12□□□□□ -1.75
TIM54YJL054W MRP17P28778 131 aa4.12□□□□□ -1.75
TIM54YJL054W YRA2P36036 203 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
TIM54YJL054W MRPL3P36516 390 aa4.12□□□□□ -1.75
TIM54YJL054W QDR3P38227 689 aa4.12□□□□□ -1.75
TIM54YJL054W RTC3P38804 111 aaPredicted RBP4.12□□□□□ -1.75
TIM54YJL054W YGR210CP42942 411 aa4.12□□□□□ -1.75
TIM54YJL054W ARO8P53090 500 aaKnown RBP4.12□□□□□ -1.75
TIM54YJL054W CAX4P53223 239 aa4.12□□□□□ -1.75
TIM54YJL054W ERV25P54837 211 aaKnown RBP4.12□□□□□ -1.75
TIM54YJL054W DYN2Q02647 92 aa4.12□□□□□ -1.75
TIM54YJL054W VPS28Q02767 242 aa4.12□□□□□ -1.75
TIM54YJL054W SCW10Q04951 389 aa4.12□□□□□ -1.75
TIM54YJL054W GEP3Q08622 556 aa4.12□□□□□ -1.75
TIM54YJL054W YPS3Q12303 508 aa4.12□□□□□ -1.75
TIM54YJL054W URA5P13298 226 aaKnown RBP4.11□□□□□ -1.75
TIM54YJL054W SUA5P32579 426 aa4.11□□□□□ -1.75
TIM54YJL054W IMD2P38697 523 aaKnown RBP4.11□□□□□ -1.75
TIM54YJL054W NSA2P40078 261 aaKnown RBP4.11□□□□□ -1.75
TIM54YJL054W MSO1P53604 210 aaKnown RBP4.11□□□□□ -1.75
TIM54YJL054W TPI1P00942 248 aaKnown RBP4.1□□□□□ -1.75
TIM54YJL054W ARG80P07249 177 aa4.1□□□□□ -1.75
TIM54YJL054W YBL071CP38185 102 aa4.1□□□□□ -1.75
TIM54YJL054W YPC1P38298 316 aa4.1□□□□□ -1.75
TIM54YJL054W RPL13BP40212 199 aaKnown RBP4.1□□□□□ -1.75
TIM54YJL054W AGX1P43567 385 aa4.1□□□□□ -1.75
TIM54YJL054W FEX1Q08913 375 aa4.1□□□□□ -1.75
TIM54YJL054W FEX2Q08991 375 aa4.1□□□□□ -1.75
TIM54YJL054W RPL13AQ12690 199 aaPredicted RBP4.1□□□□□ -1.75
TIM54YJL054W PUT1P09368 476 aa4.09□□□□□ -1.75
TIM54YJL054W FPR2P32472 135 aa4.09□□□□□ -1.75
TIM54YJL054W YKL162CP36052 402 aa4.09□□□□□ -1.75
TIM54YJL054W RRT1P38192 103 aa4.09□□□□□ -1.75
TIM54YJL054W WSS1P38838 269 aa4.09□□□□□ -1.75
TIM54YJL054W POR2P40478 281 aa4.09□□□□□ -1.75
TIM54YJL054W YKE4P40544 346 aa4.09□□□□□ -1.75
TIM54YJL054W RRG8Q06109 277 aa4.09□□□□□ -1.75
TIM54YJL054W DCS1Q06151 350 aa4.09□□□□□ -1.75
TIM54YJL054W TIM18Q08749 192 aa4.09□□□□□ -1.75
TIM54YJL054W TFB5Q3E7C1 72 aaPredicted RBP4.09□□□□□ -1.75
TIM54YJL054W TAR1Q8TGM6 124 aa4.09□□□□□ -1.75
TIM54YJL054W MDN1Q12019 4910 aaKnown RBP4.09□□□□□ -1.75
TIM54YJL054W MRS3P10566 314 aa4.08□□□□□ -1.76
TIM54YJL054W AVT5P38176 459 aa4.08□□□□□ -1.76
TIM54YJL054W CSH1P38287 376 aa4.08□□□□□ -1.76
TIM54YJL054W YBR242WP38331 238 aa4.08□□□□□ -1.76
TIM54YJL054W YER137CP40083 148 aaKnown RBP4.08□□□□□ -1.76
TIM54YJL054W ALG13P53178 202 aa4.08□□□□□ -1.76
TIM54YJL054W HCH1P53834 153 aa4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms