RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W RCF2P53721 224 aa1.26□□□□□ -2.21
SEC28YIL076W YNL140CP53910 189 aa1.26□□□□□ -2.21
SEC28YIL076W MET31Q03081 177 aa1.26□□□□□ -2.21
SEC28YIL076W YDR249CQ03787 373 aa1.26□□□□□ -2.21
SEC28YIL076W MIX14Q04341 121 aa1.26□□□□□ -2.21
SEC28YIL076W RAF1Q06891 181 aa1.26□□□□□ -2.21
SEC28YIL076W JLP1Q12358 412 aa1.26□□□□□ -2.21
SEC28YIL076W RRP36Q12481 300 aaPredicted RBP1.26□□□□□ -2.21
SEC28YIL076W PSF1Q12488 208 aa1.26□□□□□ -2.21
SEC28YIL076W FZF1P32805 299 aa1.25□□□□□ -2.21
SEC28YIL076W VPS21P36017 210 aaKnown RBP1.25□□□□□ -2.21
SEC28YIL076W CAF4P36130 643 aa1.25□□□□□ -2.21
SEC28YIL076W NSG1P38837 291 aa1.25□□□□□ -2.21
SEC28YIL076W AST2P39945 430 aaKnown RBP1.25□□□□□ -2.21
SEC28YIL076W LIA1P47120 325 aaKnown RBP1.25□□□□□ -2.21
SEC28YIL076W NOP19P53317 196 aaPredicted RBP1.25□□□□□ -2.21
SEC28YIL076W CSM4Q08955 156 aa1.25□□□□□ -2.21
SEC28YIL076W YLR053CQ12026 108 aa1.25□□□□□ -2.21
SEC28YIL076W MCP1Q12106 302 aa1.25□□□□□ -2.21
SEC28YIL076W RHO1P06780 209 aaKnown RBP1.24□□□□□ -2.21
SEC28YIL076W NMT1P14743 455 aa1.24□□□□□ -2.21
SEC28YIL076W SSO1P32867 290 aa1.24□□□□□ -2.21
SEC28YIL076W VPS51P36116 164 aa1.24□□□□□ -2.21
SEC28YIL076W YBR063CP38083 404 aa1.24□□□□□ -2.21
SEC28YIL076W PRE6P40303 254 aaKnown RBP1.24□□□□□ -2.21
SEC28YIL076W RFC4P40339 323 aaKnown RBP1.24□□□□□ -2.21
SEC28YIL076W FMP32P43557 207 aa1.24□□□□□ -2.21
SEC28YIL076W RPS12P48589 143 aaKnown RBP1.24□□□□□ -2.21
SEC28YIL076W MPP6P53725 186 aaPredicted RBP1.24□□□□□ -2.21
SEC28YIL076W SWP1Q02795 286 aa1.24□□□□□ -2.21
SEC28YIL076W BTS1Q12051 335 aa1.24□□□□□ -2.21
SEC28YIL076W YHR139C-AO13536 103 aa1.23□□□□□ -2.21
SEC28YIL076W CCW14O13547 238 aa1.23□□□□□ -2.21
SEC28YIL076W VAR1P02381 398 aa1.23□□□□□ -2.21
SEC28YIL076W RPO26P20435 155 aa1.23□□□□□ -2.21
SEC28YIL076W RPS1BP23248 255 aaKnown RBP1.23□□□□□ -2.21
SEC28YIL076W SEC17P32602 292 aa1.23□□□□□ -2.21
SEC28YIL076W PTC1P35182 281 aa1.23□□□□□ -2.21
SEC28YIL076W PRS3P38689 320 aaKnown RBP1.23□□□□□ -2.21
SEC28YIL076W YIR020CP40575 100 aa1.23□□□□□ -2.21
SEC28YIL076W ILM1P47155 203 aa1.23□□□□□ -2.21
SEC28YIL076W PAC10P48363 199 aa1.23□□□□□ -2.21
SEC28YIL076W SBH2P52871 88 aa1.23□□□□□ -2.21
SEC28YIL076W YNL010WP53981 241 aaKnown RBP1.23□□□□□ -2.21
SEC28YIL076W YDR476CQ03362 224 aa1.23□□□□□ -2.21
SEC28YIL076W FMN1Q03778 218 aa1.23□□□□□ -2.21
SEC28YIL076W SSQ1Q05931 657 aaPredicted RBP1.23□□□□□ -2.21
SEC28YIL076W RPL27BP0C2H7 136 aaKnown RBP1.22□□□□□ -2.21
SEC28YIL076W DBF2P22204 572 aa1.22□□□□□ -2.21
SEC28YIL076W RAD51P25454 400 aa1.22□□□□□ -2.21
SEC28YIL076W RPT5P33297 434 aaKnown RBP1.22□□□□□ -2.21
SEC28YIL076W LHP1P33399 275 aaKnown RBP1.22□□□□□ -2.21
SEC28YIL076W YKL102CP34249 101 aa1.22□□□□□ -2.21
SEC28YIL076W MRPL17P36528 281 aa1.22□□□□□ -2.21
SEC28YIL076W YNL217WP40152 326 aa1.22□□□□□ -2.21
SEC28YIL076W PGD1P40356 397 aa1.22□□□□□ -2.21
SEC28YIL076W ADO1P47143 340 aaKnown RBP1.22□□□□□ -2.21
SEC28YIL076W YGL235WP53071 178 aa1.22□□□□□ -2.21
SEC28YIL076W CUS2P53830 285 aaPredicted RBP1.22□□□□□ -2.21
SEC28YIL076W YLR036CQ07986 203 aa1.22□□□□□ -2.21
SEC28YIL076W BRX1Q08235 291 aaKnown RBP1.22□□□□□ -2.21
SEC28YIL076W YPR202WQ08993 238 aa1.22□□□□□ -2.21
SEC28YIL076W YDL180WQ12301 547 aa1.22□□□□□ -2.21
SEC28YIL076W RTR2Q12378 196 aa1.22□□□□□ -2.21
SEC28YIL076W YOR343CQ12484 108 aa1.22□□□□□ -2.21
SEC28YIL076W MER1P16523 270 aa1.21□□□□□ -2.22
SEC28YIL076W APA2P22108 325 aa1.21□□□□□ -2.22
SEC28YIL076W MSN4P33749 630 aa1.21□□□□□ -2.22
SEC28YIL076W YKL075CP36083 450 aa1.21□□□□□ -2.22
SEC28YIL076W RGI1P40043 161 aaPredicted RBP1.21□□□□□ -2.22
SEC28YIL076W GLR1P41921 483 aaKnown RBP1.21□□□□□ -2.22
SEC28YIL076W SIP18P50263 79 aa1.21□□□□□ -2.22
SEC28YIL076W MPC1P53157 130 aaKnown RBP1.21□□□□□ -2.22
SEC28YIL076W RCE1Q03530 315 aa1.21□□□□□ -2.22
SEC28YIL076W YPR127WQ06494 345 aa1.21□□□□□ -2.22
SEC28YIL076W FIT3Q08907 204 aa1.21□□□□□ -2.22
SEC28YIL076W YOR214CQ12282 236 aa1.21□□□□□ -2.22
SEC28YIL076W YLR126CQ12288 251 aa1.21□□□□□ -2.22
SEC28YIL076W YHR214C-EQ8TGK0 99 aa1.21□□□□□ -2.22
SEC28YIL076W YPK2P18961 677 aa1.2□□□□□ -2.22
SEC28YIL076W HSP30P25619 332 aa1.2□□□□□ -2.22
SEC28YIL076W TIM12P32830 109 aa1.2□□□□□ -2.22
SEC28YIL076W RIB1P38066 345 aa1.2□□□□□ -2.22
SEC28YIL076W MTW1P39731 289 aa1.2□□□□□ -2.22
SEC28YIL076W MPM1P40364 252 aa1.2□□□□□ -2.22
SEC28YIL076W YRB2P40517 327 aa1.2□□□□□ -2.22
SEC28YIL076W YGR201CP42936 225 aa1.2□□□□□ -2.22
SEC28YIL076W GPI8P49018 411 aa1.2□□□□□ -2.22
SEC28YIL076W SED1Q01589 338 aa1.2□□□□□ -2.22
SEC28YIL076W PET191Q02772 108 aa1.2□□□□□ -2.22
SEC28YIL076W YDR391CQ04170 232 aa1.2□□□□□ -2.22
SEC28YIL076W RIM9Q04734 239 aa1.2□□□□□ -2.22
SEC28YIL076W RNH202Q05635 350 aa1.2□□□□□ -2.22
SEC28YIL076W IRC19Q07843 230 aa1.2□□□□□ -2.22
SEC28YIL076W YPL162CQ12042 273 aa1.2□□□□□ -2.22
SEC28YIL076W MSH5Q12175 901 aa1.2□□□□□ -2.22
SEC28YIL076W MHF1Q3E835 90 aa1.2□□□□□ -2.22
SEC28YIL076W RPL35AP0CX84 120 aaKnown RBP1.19□□□□□ -2.22
SEC28YIL076W RPL35BP0CX85 120 aaKnown RBP1.19□□□□□ -2.22
SEC28YIL076W PPA2P28239 310 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms